Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
SUMO3P55854 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
SUMO3P55854 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
SUMO3P55854 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC13.02□□□□□ -0.33
SUMO3P55854 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
SUMO3P55854 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC13.02□□□□□ -0.33
SUMO3P55854 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC13.02□□□□□ -0.33
SUMO3P55854 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
SUMO3P55854 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
SUMO3P55854 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.33
SUMO3P55854 AC015802.6-201ENST00000640006 5654 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
SUMO3P55854 BEND3P1-201ENST00000421591 1944 ntBASIC13.01□□□□□ -0.33
SUMO3P55854 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC13.01□□□□□ -0.33
SUMO3P55854 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SUMO3P55854 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC13.01□□□□□ -0.33
SUMO3P55854 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SUMO3P55854 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC13.01□□□□□ -0.33
SUMO3P55854 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
SUMO3P55854 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SUMO3P55854 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SUMO3P55854 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
SUMO3P55854 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC13.01□□□□□ -0.33
SUMO3P55854 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
SUMO3P55854 SSBP1-201ENST00000265304 687 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SUMO3P55854 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
SUMO3P55854 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
SUMO3P55854 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SUMO3P55854 SF3B1-204ENST00000414963 651 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
SUMO3P55854 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC13.01□□□□□ -0.33
SUMO3P55854 GPAA1P2-201ENST00000417923 928 ntBASIC13.01□□□□□ -0.33
SUMO3P55854 AK2P2-201ENST00000439142 405 ntBASIC13.01□□□□□ -0.33
SUMO3P55854 AL592301.1-201ENST00000439501 864 ntTSL 3 BASIC13.01□□□□□ -0.33
SUMO3P55854 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC13.01□□□□□ -0.33
SUMO3P55854 BX284668.4-201ENST00000453917 508 ntBASIC13.01□□□□□ -0.33
SUMO3P55854 RHEB-207ENST00000496004 744 ntTSL 2 BASIC13.01□□□□□ -0.33
SUMO3P55854 GOLGA2P8-201ENST00000505201 779 ntBASIC13.01□□□□□ -0.33
SUMO3P55854 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC13.01□□□□□ -0.33
SUMO3P55854 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC13.01□□□□□ -0.33
SUMO3P55854 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC13.01□□□□□ -0.33
SUMO3P55854 NME1-NME2-203ENST00000555572 1193 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
SUMO3P55854 MAX-218ENST00000557746 571 ntTSL 4 BASIC13.01□□□□□ -0.33
SUMO3P55854 MIR3615-201ENST00000581999 87 ntBASIC13.01□□□□□ -0.33
SUMO3P55854 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
SUMO3P55854 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
SUMO3P55854 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SUMO3P55854 AC020907.1-201ENST00000616460 1350 ntBASIC13.01□□□□□ -0.33
SUMO3P55854 BTBD8-201ENST00000342818 1412 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SUMO3P55854 RPL13AP3-202ENST00000494676 1473 ntBASIC13.01□□□□□ -0.33
SUMO3P55854 PPP1R1B-203ENST00000394267 1504 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
SUMO3P55854 CIART-201ENST00000290363 1746 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
SUMO3P55854 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
SUMO3P55854 ACVR1C-204ENST00000409680 1786 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
SUMO3P55854 ANKRD36BP2-202ENST00000421951 1899 ntTSL 3 BASIC13.01□□□□□ -0.33
SUMO3P55854 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
SUMO3P55854 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SUMO3P55854 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC13.01□□□□□ -0.33
SUMO3P55854 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SUMO3P55854 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SUMO3P55854 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
SUMO3P55854 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC13.01□□□□□ -0.33
SUMO3P55854 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SUMO3P55854 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
SUMO3P55854 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
SUMO3P55854 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
SUMO3P55854 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
SUMO3P55854 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
SUMO3P55854 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
SUMO3P55854 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SUMO3P55854 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC13.01□□□□□ -0.33
SUMO3P55854 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC13□□□□□ -0.33
SUMO3P55854 LINC01230-201ENST00000625222 3017 ntBASIC13□□□□□ -0.33
SUMO3P55854 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC13□□□□□ -0.33
SUMO3P55854 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
SUMO3P55854 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
SUMO3P55854 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC13□□□□□ -0.33
SUMO3P55854 AL928921.2-201ENST00000641325 2442 ntBASIC13□□□□□ -0.33
SUMO3P55854 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC13□□□□□ -0.33
SUMO3P55854 TOMM22-201ENST00000216034 2040 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SUMO3P55854 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
SUMO3P55854 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC13□□□□□ -0.33
SUMO3P55854 METAP2-205ENST00000546753 1862 ntTSL 2 BASIC13□□□□□ -0.33
SUMO3P55854 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
SUMO3P55854 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
SUMO3P55854 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC13□□□□□ -0.33
SUMO3P55854 AL157791.1-201ENST00000553667 1699 ntBASIC13□□□□□ -0.33
SUMO3P55854 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SUMO3P55854 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SUMO3P55854 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC13□□□□□ -0.33
SUMO3P55854 AKR1C2-202ENST00000421196 1481 ntTSL 1 (best) BASIC13□□□□□ -0.33
SUMO3P55854 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC13□□□□□ -0.33
SUMO3P55854 AC138969.2-201ENST00000532739 9932 ntBASIC13□□□□□ -0.33
SUMO3P55854 AGER-201ENST00000375055 1369 ntTSL 1 (best) BASIC13□□□□□ -0.33
SUMO3P55854 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC13□□□□□ -0.33
SUMO3P55854 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SUMO3P55854 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SUMO3P55854 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SUMO3P55854 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SUMO3P55854 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC13□□□□□ -0.33
SUMO3P55854 AC239868.1-201ENST00000369385 493 ntBASIC13□□□□□ -0.33
SUMO3P55854 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC13□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 69.8 ms