Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 AC114488.1-201ENST00000435872 591 ntTSL 3 BASIC14.18□□□□□ -0.14
LIMK1P53667 OR2R1P-201ENST00000441404 914 ntBASIC14.18□□□□□ -0.14
LIMK1P53667 AL121845.1-201ENST00000447343 464 ntTSL 2 BASIC14.18□□□□□ -0.14
LIMK1P53667 DMKN-229ENST00000467637 827 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
LIMK1P53667 S100A2-205ENST00000487430 752 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LIMK1P53667 PPIA-208ENST00000489459 907 ntTSL 2 BASIC14.18□□□□□ -0.14
LIMK1P53667 GDNF-207ENST00000515058 764 ntTSL 5 BASIC14.18□□□□□ -0.14
LIMK1P53667 AC129507.4-201ENST00000570501 411 ntTSL 2 BASIC14.18□□□□□ -0.14
LIMK1P53667 ZNF530-203ENST00000597864 634 ntTSL 2 BASIC14.18□□□□□ -0.14
LIMK1P53667 AC005759.1-202ENST00000599416 415 ntTSL 3 BASIC14.18□□□□□ -0.14
LIMK1P53667 ANKRD20A21P-201ENST00000611282 517 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
LIMK1P53667 TP53-221ENST00000615910 1149 ntTSL 5 BASIC14.18□□□□□ -0.14
LIMK1P53667 PPIA-210ENST00000620047 827 ntTSL 5 BASIC14.18□□□□□ -0.14
LIMK1P53667 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LIMK1P53667 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
LIMK1P53667 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
LIMK1P53667 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
LIMK1P53667 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LIMK1P53667 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
LIMK1P53667 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LIMK1P53667 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC14.18□□□□□ -0.14
LIMK1P53667 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
LIMK1P53667 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LIMK1P53667 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
LIMK1P53667 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LIMK1P53667 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
LIMK1P53667 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC14.18□□□□□ -0.14
LIMK1P53667 ABR-228ENST00000574437 3196 ntTSL 5 BASIC14.18□□□□□ -0.14
LIMK1P53667 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
LIMK1P53667 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
LIMK1P53667 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC14.18□□□□□ -0.14
LIMK1P53667 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
LIMK1P53667 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LIMK1P53667 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
LIMK1P53667 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
LIMK1P53667 TEKT4P2-202ENST00000559466 1312 ntBASIC14.17□□□□□ -0.14
LIMK1P53667 TKT-201ENST00000296289 1931 ntTSL 5 BASIC14.17□□□□□ -0.14
LIMK1P53667 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC14.17□□□□□ -0.14
LIMK1P53667 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC14.17□□□□□ -0.14
LIMK1P53667 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC14.17□□□□□ -0.14
LIMK1P53667 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LIMK1P53667 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LIMK1P53667 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
LIMK1P53667 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LIMK1P53667 PHB-210ENST00000511832 1509 ntTSL 2 BASIC14.17□□□□□ -0.14
LIMK1P53667 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
LIMK1P53667 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC14.17□□□□□ -0.14
LIMK1P53667 ZCCHC13-201ENST00000339534 842 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
LIMK1P53667 CACNG7-202ENST00000391766 631 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
LIMK1P53667 RBM4-203ENST00000398692 921 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
LIMK1P53667 CFAP36-203ENST00000403007 759 ntTSL 2 BASIC14.17□□□□□ -0.14
LIMK1P53667 AF274858.1-201ENST00000406288 372 ntBASIC14.17□□□□□ -0.14
LIMK1P53667 TAC3-208ENST00000441881 731 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
LIMK1P53667 AP001062.3-202ENST00000444409 619 ntTSL 2 BASIC14.17□□□□□ -0.14
LIMK1P53667 TAGLN3-203ENST00000455401 1164 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LIMK1P53667 RBM4-207ENST00000506523 654 ntTSL 3 BASIC14.17□□□□□ -0.14
LIMK1P53667 AC122719.1-201ENST00000507989 559 ntTSL 4 BASIC14.17□□□□□ -0.14
LIMK1P53667 LINC02171-201ENST00000508619 1033 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
LIMK1P53667 AC106047.2-201ENST00000511723 743 ntBASIC14.17□□□□□ -0.14
LIMK1P53667 MRPS36-204ENST00000512880 1200 ntTSL 5 BASIC14.17□□□□□ -0.14
LIMK1P53667 AC012213.1-201ENST00000517376 722 ntTSL 3 BASIC14.17□□□□□ -0.14
LIMK1P53667 IGHV3OR15-7-201ENST00000558565 359 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
LIMK1P53667 SRP14-204ENST00000558720 780 ntTSL 2 BASIC14.17□□□□□ -0.14
LIMK1P53667 AC130456.3-201ENST00000561762 633 ntTSL 3 BASIC14.17□□□□□ -0.14
LIMK1P53667 MRPS36-205ENST00000602380 1200 ntTSL 2 BASIC14.17□□□□□ -0.14
LIMK1P53667 TAC3-211ENST00000615887 1120 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
LIMK1P53667 AL136040.2-201ENST00000618431 1130 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
LIMK1P53667 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC14.17□□□□□ -0.14
LIMK1P53667 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
LIMK1P53667 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC14.17□□□□□ -0.14
LIMK1P53667 AC010327.5-201ENST00000586923 3061 ntBASIC14.17□□□□□ -0.14
LIMK1P53667 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LIMK1P53667 AC012508.2-201ENST00000567613 1472 ntBASIC14.17□□□□□ -0.14
LIMK1P53667 ATF4-203ENST00000404241 1910 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
LIMK1P53667 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
LIMK1P53667 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LIMK1P53667 OXA1L-212ENST00000604262 1571 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LIMK1P53667 AC007686.3-201ENST00000619017 3487 ntBASIC14.17□□□□□ -0.14
LIMK1P53667 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
LIMK1P53667 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
LIMK1P53667 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LIMK1P53667 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LIMK1P53667 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC14.16□□□□□ -0.14
LIMK1P53667 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC14.16□□□□□ -0.14
LIMK1P53667 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LIMK1P53667 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
LIMK1P53667 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
LIMK1P53667 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LIMK1P53667 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC14.16□□□□□ -0.14
LIMK1P53667 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
LIMK1P53667 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LIMK1P53667 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
LIMK1P53667 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
LIMK1P53667 NHP2P1-201ENST00000335274 462 ntBASIC14.16□□□□□ -0.14
LIMK1P53667 PLAC9-203ENST00000372270 534 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
LIMK1P53667 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC14.16□□□□□ -0.14
LIMK1P53667 AC012506.1-201ENST00000423706 525 ntTSL 4 BASIC14.16□□□□□ -0.14
LIMK1P53667 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC14.16□□□□□ -0.14
LIMK1P53667 HDAC2-AS2-203ENST00000436876 591 ntTSL 5 BASIC14.16□□□□□ -0.14
LIMK1P53667 VENTXP4-201ENST00000449029 958 ntBASIC14.16□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms