Protein–RNA interactions for Protein: P49450

CENPA, Histone H3-like centromeric protein A, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPAP49450 TERF1P3-201ENST00000505638 1227 ntBASIC13.21□□□□□ -0.29
CENPAP49450 ALG3P1-201ENST00000508806 1114 ntBASIC13.21□□□□□ -0.29
CENPAP49450 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC13.21□□□□□ -0.29
CENPAP49450 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
CENPAP49450 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC13.21□□□□□ -0.29
CENPAP49450 UQCRB-201ENST00000287022 5575 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CENPAP49450 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CENPAP49450 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC13.21□□□□□ -0.29
CENPAP49450 ATP2C2-AS1-201ENST00000565700 2998 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
CENPAP49450 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CENPAP49450 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CENPAP49450 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.3
CENPAP49450 WASHC5-202ENST00000517845 3667 ntTSL 2 BASIC13.21□□□□□ -0.3
CENPAP49450 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC13.21□□□□□ -0.3
CENPAP49450 PBRM1-204ENST00000394830 5071 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.3
CENPAP49450 GDPD2-204ENST00000536730 2171 ntTSL 2 BASIC13.21□□□□□ -0.3
CENPAP49450 HSP90AA1-201ENST00000216281 3379 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
CENPAP49450 CCDC18-203ENST00000401026 4552 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
CENPAP49450 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC13.21□□□□□ -0.3
CENPAP49450 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.3
CENPAP49450 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
CENPAP49450 KIAA0895L-201ENST00000290881 3550 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.3
CENPAP49450 OFD1-204ENST00000398395 3307 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.3
CENPAP49450 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
CENPAP49450 BCORL1-201ENST00000218147 6860 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.3
CENPAP49450 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.3
CENPAP49450 ARMCX2-201ENST00000328766 2762 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CENPAP49450 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CENPAP49450 MAP7-202ENST00000432797 4375 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
CENPAP49450 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC13.2□□□□□ -0.3
CENPAP49450 RP1-207ENST00000637698 6177 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
CENPAP49450 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC13.2□□□□□ -0.3
CENPAP49450 SCN8A-209ENST00000627620 5943 ntAPPRIS ALT1 TSL 5 BASIC13.2□□□□□ -0.3
CENPAP49450 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CENPAP49450 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC13.2□□□□□ -0.3
CENPAP49450 KIRREL3-205ENST00000529097 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
CENPAP49450 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC13.2□□□□□ -0.3
CENPAP49450 C1R-201ENST00000535233 2211 ntTSL 2 BASIC13.2□□□□□ -0.3
CENPAP49450 KRT42P-202ENST00000438131 2895 ntTSL 2 BASIC13.2□□□□□ -0.3
CENPAP49450 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC13.2□□□□□ -0.3
CENPAP49450 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CENPAP49450 CAD-201ENST00000264705 7265 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CENPAP49450 KIAA0895-203ENST00000338533 4132 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CENPAP49450 NAA15-202ENST00000398947 6072 ntAPPRIS ALT1 TSL 5 BASIC13.2□□□□□ -0.3
CENPAP49450 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CENPAP49450 NCBP1-202ENST00000375147 5178 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CENPAP49450 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CENPAP49450 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CENPAP49450 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CENPAP49450 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CENPAP49450 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CENPAP49450 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CENPAP49450 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC13.2□□□□□ -0.3
CENPAP49450 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CENPAP49450 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC13.2□□□□□ -0.3
CENPAP49450 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC13.2□□□□□ -0.3
CENPAP49450 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC13.2□□□□□ -0.3
CENPAP49450 PTP4A1P2-201ENST00000546033 454 ntBASIC13.2□□□□□ -0.3
CENPAP49450 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC13.2□□□□□ -0.3
CENPAP49450 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC13.2□□□□□ -0.3
CENPAP49450 SPCS2P1-201ENST00000561636 679 ntBASIC13.2□□□□□ -0.3
CENPAP49450 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC13.2□□□□□ -0.3
CENPAP49450 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
CENPAP49450 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC13.2□□□□□ -0.3
CENPAP49450 AC145423.3-201ENST00000615987 467 ntBASIC13.2□□□□□ -0.3
CENPAP49450 ABBA01031660.1-201ENST00000635219 756 ntBASIC13.2□□□□□ -0.3
CENPAP49450 FAM155B-201ENST00000252338 4013 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CENPAP49450 TMEM248-201ENST00000341567 4229 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CENPAP49450 SAMD14-202ENST00000330175 4425 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CENPAP49450 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CENPAP49450 AC020910.6-201ENST00000623084 1459 ntBASIC13.2□□□□□ -0.3
CENPAP49450 GRIN1-204ENST00000371553 3751 ntAPPRIS P4 TSL 1 (best) BASIC13.2□□□□□ -0.3
CENPAP49450 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CENPAP49450 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CENPAP49450 CARHSP1-218ENST00000614449 2931 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
CENPAP49450 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC13.2□□□□□ -0.3
CENPAP49450 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CENPAP49450 RAPH1-213ENST00000630330 4134 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
CENPAP49450 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CENPAP49450 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CENPAP49450 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
CENPAP49450 ZNF71-201ENST00000328070 5428 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CENPAP49450 MYO9B-206ENST00000595618 7623 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CENPAP49450 RIPOR3-202ENST00000327979 4377 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
CENPAP49450 CYP51A1-AS1-201ENST00000453068 2957 ntTSL 5 BASIC13.2□□□□□ -0.3
CENPAP49450 DENND4C-205ENST00000434457 6718 ntTSL 5 BASIC13.2□□□□□ -0.3
CENPAP49450 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
CENPAP49450 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
CENPAP49450 NTRK2-203ENST00000323115 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CENPAP49450 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
CENPAP49450 MYH3-205ENST00000583535 6037 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
CENPAP49450 SLC22A23-202ENST00000380302 2883 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CENPAP49450 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
CENPAP49450 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CENPAP49450 ADK-205ENST00000539909 1866 ntTSL 2 BASIC13.19□□□□□ -0.3
CENPAP49450 AC020910.5-201ENST00000623668 1865 ntBASIC13.19□□□□□ -0.3
CENPAP49450 USP20-201ENST00000315480 4458 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CENPAP49450 ZYG11A-201ENST00000371528 4469 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
CENPAP49450 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
CENPAP49450 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms