Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 FAM219A-207ENST00000379089 3624 ntAPPRIS ALT1 TSL 3 BASIC11.87□□□□□ -0.51
NKX2-1P43699 SYMPK-214ENST00000599814 6537 ntTSL 2 BASIC11.87□□□□□ -0.51
NKX2-1P43699 USF1-202ENST00000368020 1717 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
NKX2-1P43699 OSBPL9-201ENST00000361556 2721 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
NKX2-1P43699 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
NKX2-1P43699 MLPH-201ENST00000264605 3823 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
NKX2-1P43699 CMC4-201ENST00000369479 864 ntAPPRIS P1 TSL 3 BASIC11.87□□□□□ -0.51
NKX2-1P43699 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
NKX2-1P43699 B9D1-203ENST00000395615 805 ntTSL 3 BASIC11.87□□□□□ -0.51
NKX2-1P43699 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
NKX2-1P43699 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC11.87□□□□□ -0.51
NKX2-1P43699 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC11.87□□□□□ -0.51
NKX2-1P43699 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC11.87□□□□□ -0.51
NKX2-1P43699 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC11.87□□□□□ -0.51
NKX2-1P43699 AC114812.1-204ENST00000449669 728 ntBASIC11.87□□□□□ -0.51
NKX2-1P43699 VDAC1P7-201ENST00000462417 847 ntBASIC11.87□□□□□ -0.51
NKX2-1P43699 HLA-J-203ENST00000494367 1087 ntBASIC11.87□□□□□ -0.51
NKX2-1P43699 GIMAP3P-201ENST00000495150 836 ntBASIC11.87□□□□□ -0.51
NKX2-1P43699 RAB35-202ENST00000534951 939 ntTSL 2 BASIC11.87□□□□□ -0.51
NKX2-1P43699 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
NKX2-1P43699 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC11.87□□□□□ -0.51
NKX2-1P43699 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC11.87□□□□□ -0.51
NKX2-1P43699 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC11.87□□□□□ -0.51
NKX2-1P43699 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC11.87□□□□□ -0.51
NKX2-1P43699 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC11.87□□□□□ -0.51
NKX2-1P43699 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC11.87□□□□□ -0.51
NKX2-1P43699 AC023511.2-201ENST00000618803 211 ntBASIC11.87□□□□□ -0.51
NKX2-1P43699 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC11.87□□□□□ -0.51
NKX2-1P43699 FES-201ENST00000328850 2829 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
NKX2-1P43699 THSD7A-205ENST00000617773 10583 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
NKX2-1P43699 ICOSLG-202ENST00000400377 2907 ntTSL 2 BASIC11.87□□□□□ -0.51
NKX2-1P43699 YIPF6-201ENST00000374622 6134 ntTSL 2 BASIC11.87□□□□□ -0.51
NKX2-1P43699 RRM2B-211ENST00000621845 3483 ntTSL 2 BASIC11.87□□□□□ -0.51
NKX2-1P43699 MIER1-202ENST00000355977 3595 ntTSL 5 BASIC11.87□□□□□ -0.51
NKX2-1P43699 NLGN3-201ENST00000358741 3046 ntAPPRIS P4 TSL 5 BASIC11.87□□□□□ -0.51
NKX2-1P43699 LINC01257-201ENST00000376678 2473 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
NKX2-1P43699 AC093899.2-201ENST00000513963 1935 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
NKX2-1P43699 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC11.87□□□□□ -0.51
NKX2-1P43699 LHX6-210ENST00000559895 3587 ntTSL 2 BASIC11.87□□□□□ -0.51
NKX2-1P43699 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC11.87□□□□□ -0.51
NKX2-1P43699 LINC02486-201ENST00000604157 3000 ntBASIC11.87□□□□□ -0.51
NKX2-1P43699 THSD4-201ENST00000261862 3133 ntTSL 5 BASIC11.87□□□□□ -0.51
NKX2-1P43699 RAB40A-202ENST00000372633 3126 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
NKX2-1P43699 COL6A2-203ENST00000397763 3101 ntTSL 5 BASIC11.87□□□□□ -0.51
NKX2-1P43699 CNN2-202ENST00000348419 2033 ntTSL 2 BASIC11.87□□□□□ -0.51
NKX2-1P43699 BAIAP3-203ENST00000421665 3875 ntTSL 2 BASIC11.87□□□□□ -0.51
NKX2-1P43699 AC141928.1-201ENST00000511928 4525 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
NKX2-1P43699 AC092143.1-201ENST00000556922 2776 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
NKX2-1P43699 WDR73-202ENST00000434634 5387 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
NKX2-1P43699 POTEE-201ENST00000356920 4159 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
NKX2-1P43699 OR6F1-204ENST00000641470 1762 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
NKX2-1P43699 LANCL1-205ENST00000443314 4781 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
NKX2-1P43699 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC11.87□□□□□ -0.51
NKX2-1P43699 C7orf57-202ENST00000420324 1957 ntTSL 5 BASIC11.87□□□□□ -0.51
NKX2-1P43699 LINC00324-201ENST00000315707 2082 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
NKX2-1P43699 ZSCAN16-AS1-201ENST00000600652 2163 ntTSL 2 BASIC11.86□□□□□ -0.51
NKX2-1P43699 AL138725.1-201ENST00000407347 1314 ntBASIC11.86□□□□□ -0.51
NKX2-1P43699 AC064801.2-201ENST00000625052 1303 ntBASIC11.86□□□□□ -0.51
NKX2-1P43699 SLC7A7-201ENST00000285850 2263 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
NKX2-1P43699 RUFY4-201ENST00000344321 2352 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
NKX2-1P43699 AGAP12P-201ENST00000585227 2359 ntBASIC11.86□□□□□ -0.51
NKX2-1P43699 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
NKX2-1P43699 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
NKX2-1P43699 MARK2P9-201ENST00000430958 1727 ntBASIC11.86□□□□□ -0.51
NKX2-1P43699 TSPAN31-201ENST00000257910 1849 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
NKX2-1P43699 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
NKX2-1P43699 FBXO32-203ENST00000517956 6744 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
NKX2-1P43699 AC011481.3-201ENST00000623895 5594 ntBASIC11.86□□□□□ -0.51
NKX2-1P43699 USP49-201ENST00000373006 3177 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
NKX2-1P43699 PNMA5-205ENST00000535214 3198 ntAPPRIS P2 TSL 3 BASIC11.86□□□□□ -0.51
NKX2-1P43699 KY-202ENST00000503669 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
NKX2-1P43699 PRPSAP1-206ENST00000446526 3660 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
NKX2-1P43699 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
NKX2-1P43699 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
NKX2-1P43699 WDR26-201ENST00000414423 6872 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
NKX2-1P43699 GOLGA6L10-209ENST00000621197 4160 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
NKX2-1P43699 KLHL13-209ENST00000545703 3322 ntAPPRIS ALT1 TSL 1 (best) BASIC11.86□□□□□ -0.51
NKX2-1P43699 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
NKX2-1P43699 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
NKX2-1P43699 AL139400.1-201ENST00000366220 510 ntBASIC11.86□□□□□ -0.51
NKX2-1P43699 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
NKX2-1P43699 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
NKX2-1P43699 USP17L6P-201ENST00000382470 1197 ntBASIC11.86□□□□□ -0.51
NKX2-1P43699 HNRNPFP1-201ENST00000391730 1133 ntBASIC11.86□□□□□ -0.51
NKX2-1P43699 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
NKX2-1P43699 AC136604.1-202ENST00000425471 771 ntBASIC11.86□□□□□ -0.51
NKX2-1P43699 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
NKX2-1P43699 AC114501.2-201ENST00000439631 535 ntBASIC11.86□□□□□ -0.51
NKX2-1P43699 CNN2P2-201ENST00000443536 909 ntBASIC11.86□□□□□ -0.51
NKX2-1P43699 CNN2P3-201ENST00000450201 906 ntBASIC11.86□□□□□ -0.51
NKX2-1P43699 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC11.86□□□□□ -0.51
NKX2-1P43699 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC11.86□□□□□ -0.51
NKX2-1P43699 LY6E-204ENST00000519546 971 ntTSL 2 BASIC11.86□□□□□ -0.51
NKX2-1P43699 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC11.86□□□□□ -0.51
NKX2-1P43699 AC025678.2-201ENST00000562061 970 ntBASIC11.86□□□□□ -0.51
NKX2-1P43699 SSH2-210ENST00000582084 560 ntTSL 3 BASIC11.86□□□□□ -0.51
NKX2-1P43699 AC027612.4-201ENST00000605371 583 ntBASIC11.86□□□□□ -0.51
NKX2-1P43699 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC11.86□□□□□ -0.51
NKX2-1P43699 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC11.86□□□□□ -0.51
NKX2-1P43699 BAP1-211ENST00000615113 489 ntBASIC11.86□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 93.8 ms