Protein–RNA interactions for Protein: P35527

KRT9, Keratin, type I cytoskeletal 9, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT9P35527 TUBGCP3-201ENST00000261965 3899 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
KRT9P35527 IL1RL2-201ENST00000264257 2615 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
KRT9P35527 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
KRT9P35527 ABCG8-201ENST00000272286 2665 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
KRT9P35527 CLOCK-211ENST00000513440 3580 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
KRT9P35527 LRSAM1-203ENST00000373322 2849 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
KRT9P35527 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
KRT9P35527 ZNRF3-202ENST00000406323 2878 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
KRT9P35527 SETD1A-201ENST00000262519 6451 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
KRT9P35527 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
KRT9P35527 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
KRT9P35527 EHMT2-204ENST00000395728 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
KRT9P35527 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC15.83■□□□□ 0.13
KRT9P35527 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC15.83■□□□□ 0.13
KRT9P35527 ZDHHC6-202ENST00000369405 2170 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
KRT9P35527 SLC23A1-201ENST00000348729 2299 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
KRT9P35527 ZNF135-205ENST00000511556 2253 ntAPPRIS P3 TSL 2 BASIC15.83■□□□□ 0.13
KRT9P35527 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
KRT9P35527 SF1-201ENST00000227503 2850 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
KRT9P35527 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC15.83■□□□□ 0.13
KRT9P35527 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
KRT9P35527 SLC35G1-201ENST00000371408 3490 ntAPPRIS P3 TSL 2 BASIC15.83■□□□□ 0.12
KRT9P35527 WASHC2C-201ENST00000336378 4669 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
KRT9P35527 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
KRT9P35527 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
KRT9P35527 NLRX1-201ENST00000292199 3744 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
KRT9P35527 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
KRT9P35527 SLC9B2-202ENST00000394785 3126 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
KRT9P35527 ACADM-218ENST00000541113 2535 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
KRT9P35527 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
KRT9P35527 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
KRT9P35527 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
KRT9P35527 MPV17-205ENST00000402310 906 ntTSL 5 BASIC15.83■□□□□ 0.12
KRT9P35527 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC15.83■□□□□ 0.12
KRT9P35527 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC15.83■□□□□ 0.12
KRT9P35527 ARSEP1-201ENST00000420443 635 ntBASIC15.83■□□□□ 0.12
KRT9P35527 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC15.83■□□□□ 0.12
KRT9P35527 AC007551.1-201ENST00000457394 519 ntBASIC15.83■□□□□ 0.12
KRT9P35527 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC15.83■□□□□ 0.12
KRT9P35527 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC15.83■□□□□ 0.12
KRT9P35527 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
KRT9P35527 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.12
KRT9P35527 CR383656.12-201ENST00000549567 513 ntBASIC15.83■□□□□ 0.12
KRT9P35527 AC005225.4-201ENST00000557330 545 ntBASIC15.83■□□□□ 0.12
KRT9P35527 AC027237.1-201ENST00000560942 655 ntBASIC15.83■□□□□ 0.12
KRT9P35527 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC15.83■□□□□ 0.12
KRT9P35527 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC15.83■□□□□ 0.12
KRT9P35527 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
KRT9P35527 KRT8P28-201ENST00000433288 1390 ntBASIC15.83■□□□□ 0.12
KRT9P35527 CRTC1-202ENST00000338797 6929 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.12
KRT9P35527 CMTR2-201ENST00000338099 4869 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
KRT9P35527 CCSER2-203ENST00000372088 7657 ntTSL 2 BASIC15.83■□□□□ 0.12
KRT9P35527 TRIM10-204ENST00000449742 3546 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
KRT9P35527 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
KRT9P35527 NDRG4-221ENST00000563799 3014 ntAPPRIS ALT1 TSL 2 BASIC15.83■□□□□ 0.12
KRT9P35527 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
KRT9P35527 LINC01725-203ENST00000417975 3177 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
KRT9P35527 STK3-218ENST00000617590 2485 ntTSL 5 BASIC15.83■□□□□ 0.12
KRT9P35527 SPATA20-227ENST00000634597 2587 ntAPPRIS ALT1 TSL 5 BASIC15.82■□□□□ 0.12
KRT9P35527 KRT36-202ENST00000393986 1707 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
KRT9P35527 ADAMTS13-202ENST00000356589 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
KRT9P35527 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC15.82■□□□□ 0.12
KRT9P35527 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
KRT9P35527 AL139193.2-201ENST00000553712 1954 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
KRT9P35527 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
KRT9P35527 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
KRT9P35527 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
KRT9P35527 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
KRT9P35527 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
KRT9P35527 MOG-221ENST00000376917 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
KRT9P35527 STK26-202ENST00000394334 3288 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
KRT9P35527 SYT1-204ENST00000457153 4592 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
KRT9P35527 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
KRT9P35527 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
KRT9P35527 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
KRT9P35527 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
KRT9P35527 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
KRT9P35527 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC15.82■□□□□ 0.12
KRT9P35527 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
KRT9P35527 FAM197Y7-201ENST00000432892 766 ntBASIC15.82■□□□□ 0.12
KRT9P35527 FAM8A4P-201ENST00000435433 1213 ntBASIC15.82■□□□□ 0.12
KRT9P35527 AL161932.2-201ENST00000435436 679 ntBASIC15.82■□□□□ 0.12
KRT9P35527 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC15.82■□□□□ 0.12
KRT9P35527 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC15.82■□□□□ 0.12
KRT9P35527 AL590640.2-201ENST00000457038 527 ntBASIC15.82■□□□□ 0.12
KRT9P35527 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC15.82■□□□□ 0.12
KRT9P35527 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC15.82■□□□□ 0.12
KRT9P35527 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC15.82■□□□□ 0.12
KRT9P35527 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
KRT9P35527 LINC02084-201ENST00000606069 1096 ntBASIC15.82■□□□□ 0.12
KRT9P35527 LARP4-220ENST00000615080 856 ntTSL 5 BASIC15.82■□□□□ 0.12
KRT9P35527 APBB1-201ENST00000299402 2636 ntAPPRIS P3 TSL 5 BASIC15.82■□□□□ 0.12
KRT9P35527 RBBP8NL-201ENST00000252998 2793 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
KRT9P35527 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
KRT9P35527 AP000593.2-201ENST00000542775 1433 ntBASIC15.82■□□□□ 0.12
KRT9P35527 CCDC57-203ENST00000392343 2896 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
KRT9P35527 MEX3B-202ENST00000558133 4333 ntBASIC15.82■□□□□ 0.12
KRT9P35527 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC15.82■□□□□ 0.12
KRT9P35527 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC15.82■□□□□ 0.12
KRT9P35527 ANKRD30BP2-201ENST00000435744 1610 ntBASIC15.82■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms