Protein–RNA interactions for Protein: P19338

NCL, Nucleolin, humanhuman

Known RBP Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCLP19338 ATP2C1-201ENST00000328560 3484 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
NCLP19338 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
NCLP19338 SCOC-210ENST00000608372 5129 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
NCLP19338 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NCLP19338 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
NCLP19338 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC17.32■□□□□ 0.36
NCLP19338 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
NCLP19338 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC17.32■□□□□ 0.36
NCLP19338 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
NCLP19338 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
NCLP19338 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC17.32■□□□□ 0.36
NCLP19338 AC123567.1-201ENST00000548294 1261 ntBASIC17.32■□□□□ 0.36
NCLP19338 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC17.32■□□□□ 0.36
NCLP19338 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC17.32■□□□□ 0.36
NCLP19338 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC17.32■□□□□ 0.36
NCLP19338 TMUB2-201ENST00000319511 2418 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
NCLP19338 CCHCR1-203ENST00000396268 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
NCLP19338 SLC52A1-203ENST00000512825 2989 ntTSL 2 BASIC17.32■□□□□ 0.36
NCLP19338 TRDMT1-203ENST00000377799 3527 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NCLP19338 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NCLP19338 SLC22A23-202ENST00000380302 2883 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
NCLP19338 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
NCLP19338 PCDHB5-201ENST00000231134 3408 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
NCLP19338 DLL4-201ENST00000249749 3372 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NCLP19338 MYH14-201ENST00000262269 3848 ntTSL 5 BASIC17.32■□□□□ 0.36
NCLP19338 UBE3A-226ENST00000637886 8725 ntAPPRIS ALT1 TSL 5 BASIC17.32■□□□□ 0.36
NCLP19338 KIF3C-202ENST00000405914 3180 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
NCLP19338 SLC8A2-203ENST00000542837 3603 ntTSL 2 BASIC17.32■□□□□ 0.36
NCLP19338 NCOR2-201ENST00000356219 7226 ntTSL 5 BASIC17.32■□□□□ 0.36
NCLP19338 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NCLP19338 EGR2-201ENST00000242480 2968 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NCLP19338 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
NCLP19338 TMC8-201ENST00000318430 4411 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
NCLP19338 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
NCLP19338 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
NCLP19338 C8orf31-201ENST00000395172 1875 ntTSL 2 BASIC17.31■□□□□ 0.36
NCLP19338 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
NCLP19338 MICB-202ENST00000399150 2346 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
NCLP19338 SCN8A-202ENST00000355133 5820 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
NCLP19338 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
NCLP19338 AC023794.5-201ENST00000564380 2157 ntBASIC17.31■□□□□ 0.36
NCLP19338 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
NCLP19338 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC17.31■□□□□ 0.36
NCLP19338 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC17.31■□□□□ 0.36
NCLP19338 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC17.31■□□□□ 0.36
NCLP19338 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
NCLP19338 GPR35-205ENST00000438013 3821 ntAPPRIS P3 BASIC17.31■□□□□ 0.36
NCLP19338 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC17.31■□□□□ 0.36
NCLP19338 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NCLP19338 MYCLP2-201ENST00000449268 967 ntBASIC17.31■□□□□ 0.36
NCLP19338 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC17.31■□□□□ 0.36
NCLP19338 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
NCLP19338 AC026410.3-201ENST00000514280 936 ntBASIC17.31■□□□□ 0.36
NCLP19338 FADS2-205ENST00000517839 469 ntTSL 3 BASIC17.31■□□□□ 0.36
NCLP19338 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC17.31■□□□□ 0.36
NCLP19338 RARRES2P5-201ENST00000564013 466 ntBASIC17.31■□□□□ 0.36
NCLP19338 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC17.31■□□□□ 0.36
NCLP19338 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
NCLP19338 AC093726.1-201ENST00000608064 963 ntBASIC17.31■□□□□ 0.36
NCLP19338 AL391069.4-201ENST00000609583 481 ntBASIC17.31■□□□□ 0.36
NCLP19338 PRKAR2A-202ENST00000296446 3318 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
NCLP19338 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC17.31■□□□□ 0.36
NCLP19338 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
NCLP19338 OR2I1P-208ENST00000641137 4948 ntBASIC17.31■□□□□ 0.36
NCLP19338 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
NCLP19338 SEMA3F-201ENST00000002829 3802 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
NCLP19338 ABCG8-201ENST00000272286 2665 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NCLP19338 METAP1D-201ENST00000315796 3419 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NCLP19338 SPOCK2-201ENST00000317376 5328 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
NCLP19338 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NCLP19338 USO1-201ENST00000264904 4135 ntTSL 2 BASIC17.31■□□□□ 0.36
NCLP19338 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NCLP19338 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NCLP19338 CACNA1G-209ENST00000502264 6921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
NCLP19338 CACNA1G-221ENST00000510115 6912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
NCLP19338 NDRG4-255ENST00000570248 3207 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
NCLP19338 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NCLP19338 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
NCLP19338 ARHGEF9-230ENST00000637178 2145 ntTSL 5 BASIC17.3■□□□□ 0.36
NCLP19338 TMCC2-201ENST00000329800 2818 ntTSL 2 BASIC17.3■□□□□ 0.36
NCLP19338 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NCLP19338 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
NCLP19338 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
NCLP19338 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
NCLP19338 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
NCLP19338 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC17.3■□□□□ 0.36
NCLP19338 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
NCLP19338 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC17.3■□□□□ 0.36
NCLP19338 SCNN1A-215ENST00000540037 3040 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
NCLP19338 RBM6-211ENST00000443081 4010 ntTSL 5 BASIC17.3■□□□□ 0.36
NCLP19338 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
NCLP19338 NR3C2-209ENST00000625323 5909 ntTSL 5 BASIC17.3■□□□□ 0.36
NCLP19338 TMEM248-201ENST00000341567 4229 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NCLP19338 GNAL-203ENST00000423027 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NCLP19338 CLOCK-211ENST00000513440 3580 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NCLP19338 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC17.3■□□□□ 0.36
NCLP19338 AP1B1-202ENST00000357586 4176 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
NCLP19338 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC17.3■□□□□ 0.36
NCLP19338 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
NCLP19338 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 66 ms