Protein–RNA interactions for Protein: P0DL12

SMIM17, Small integral membrane protein 17, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM17P0DL12 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC10.84□□□□□ -0.67
SMIM17P0DL12 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
SMIM17P0DL12 SH2D7-201ENST00000328828 2750 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
SMIM17P0DL12 MFSD2B-201ENST00000338315 2850 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
SMIM17P0DL12 SNX19-211ENST00000533214 3096 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
SMIM17P0DL12 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
SMIM17P0DL12 CHST6-201ENST00000332272 7957 ntAPPRIS P1 TSL 3 BASIC10.84□□□□□ -0.67
SMIM17P0DL12 GRIN1-207ENST00000371560 3640 ntAPPRIS ALT1 TSL 1 (best) BASIC10.84□□□□□ -0.67
SMIM17P0DL12 KCNIP3-201ENST00000295225 2940 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
SMIM17P0DL12 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
SMIM17P0DL12 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC10.84□□□□□ -0.67
SMIM17P0DL12 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
SMIM17P0DL12 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
SMIM17P0DL12 OSBPL5-201ENST00000263650 3889 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
SMIM17P0DL12 KCNAB2-206ENST00000378097 4201 ntAPPRIS P4 TSL 1 (best) BASIC10.83□□□□□ -0.68
SMIM17P0DL12 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
SMIM17P0DL12 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
SMIM17P0DL12 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
SMIM17P0DL12 SLC35F2-203ENST00000525071 3331 ntAPPRIS ALT2 TSL 2 BASIC10.83□□□□□ -0.68
SMIM17P0DL12 BCAP29-201ENST00000005259 4572 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
SMIM17P0DL12 ILF3-201ENST00000250241 3035 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
SMIM17P0DL12 EML1-203ENST00000334192 4064 ntTSL 5 BASIC10.83□□□□□ -0.68
SMIM17P0DL12 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
SMIM17P0DL12 SLC26A2-201ENST00000286298 8080 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
SMIM17P0DL12 MYO1C-202ENST00000361007 4734 ntAPPRIS P3 TSL 5 BASIC10.83□□□□□ -0.68
SMIM17P0DL12 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
SMIM17P0DL12 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
SMIM17P0DL12 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
SMIM17P0DL12 NCS1-201ENST00000372398 4991 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
SMIM17P0DL12 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
SMIM17P0DL12 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC10.83□□□□□ -0.68
SMIM17P0DL12 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
SMIM17P0DL12 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
SMIM17P0DL12 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
SMIM17P0DL12 MIR574-201ENST00000385209 96 ntBASIC10.83□□□□□ -0.68
SMIM17P0DL12 TSEN2-202ENST00000402228 2149 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
SMIM17P0DL12 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
SMIM17P0DL12 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC10.83□□□□□ -0.68
SMIM17P0DL12 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC10.83□□□□□ -0.68
SMIM17P0DL12 CNN2P2-201ENST00000443536 909 ntBASIC10.83□□□□□ -0.68
SMIM17P0DL12 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
SMIM17P0DL12 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC10.83□□□□□ -0.68
SMIM17P0DL12 CNN2P3-201ENST00000450201 906 ntBASIC10.83□□□□□ -0.68
SMIM17P0DL12 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC10.83□□□□□ -0.68
SMIM17P0DL12 RPL13AP25-201ENST00000484130 612 ntBASIC10.83□□□□□ -0.68
SMIM17P0DL12 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC10.83□□□□□ -0.68
SMIM17P0DL12 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC10.83□□□□□ -0.68
SMIM17P0DL12 AC069262.1-201ENST00000539058 672 ntBASIC10.83□□□□□ -0.68
SMIM17P0DL12 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC10.83□□□□□ -0.68
SMIM17P0DL12 AL512356.2-201ENST00000546955 174 ntBASIC10.83□□□□□ -0.68
SMIM17P0DL12 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC10.83□□□□□ -0.68
SMIM17P0DL12 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC10.83□□□□□ -0.68
SMIM17P0DL12 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC10.83□□□□□ -0.68
SMIM17P0DL12 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC10.83□□□□□ -0.68
SMIM17P0DL12 AC036164.1-201ENST00000570544 333 ntBASIC10.83□□□□□ -0.68
SMIM17P0DL12 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC10.83□□□□□ -0.68
SMIM17P0DL12 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC10.83□□□□□ -0.68
SMIM17P0DL12 SPDYE12P-201ENST00000618416 771 ntBASIC10.83□□□□□ -0.68
SMIM17P0DL12 AL136317.3-201ENST00000618497 906 ntBASIC10.83□□□□□ -0.68
SMIM17P0DL12 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
SMIM17P0DL12 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC10.83□□□□□ -0.68
SMIM17P0DL12 HSPB7-201ENST00000311890 2892 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
SMIM17P0DL12 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC10.83□□□□□ -0.68
SMIM17P0DL12 ALDH9A1-201ENST00000354775 2696 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
SMIM17P0DL12 CALD1-205ENST00000422748 2665 ntTSL 2 BASIC10.83□□□□□ -0.68
SMIM17P0DL12 C10orf105-202ENST00000441508 4836 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
SMIM17P0DL12 NSD2-205ENST00000382892 7706 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
SMIM17P0DL12 SUPV3L1-201ENST00000359655 2484 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
SMIM17P0DL12 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
SMIM17P0DL12 LINC00940-201ENST00000418006 2350 ntTSL 2 BASIC10.83□□□□□ -0.68
SMIM17P0DL12 SAFB-211ENST00000592224 3014 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
SMIM17P0DL12 EHD1-201ENST00000320631 4551 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
SMIM17P0DL12 AL121827.1-201ENST00000370257 3264 ntTSL 2 BASIC10.83□□□□□ -0.68
SMIM17P0DL12 MPRIP-202ENST00000341712 3846 ntAPPRIS P3 TSL 5 BASIC10.83□□□□□ -0.68
SMIM17P0DL12 KRT8P14-201ENST00000414254 1442 ntBASIC10.83□□□□□ -0.68
SMIM17P0DL12 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC10.83□□□□□ -0.68
SMIM17P0DL12 MCF2L-204ENST00000375608 3648 ntTSL 5 BASIC10.83□□□□□ -0.68
SMIM17P0DL12 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
SMIM17P0DL12 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
SMIM17P0DL12 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
SMIM17P0DL12 METTL13-203ENST00000367737 2865 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
SMIM17P0DL12 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
SMIM17P0DL12 AP003555.1-202ENST00000511013 1755 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
SMIM17P0DL12 UBE3A-209ENST00000625778 3217 ntTSL 5 BASIC10.82□□□□□ -0.68
SMIM17P0DL12 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
SMIM17P0DL12 NTRK2-208ENST00000395882 7111 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
SMIM17P0DL12 AAR2-202ENST00000373932 2689 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
SMIM17P0DL12 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
SMIM17P0DL12 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
SMIM17P0DL12 NBPF1-203ENST00000430580 5932 ntAPPRIS P5 TSL 5 BASIC10.82□□□□□ -0.68
SMIM17P0DL12 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
SMIM17P0DL12 CCDC144A-204ENST00000360524 5830 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
SMIM17P0DL12 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
SMIM17P0DL12 C8B-201ENST00000371237 2037 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
SMIM17P0DL12 PCDHGA9-201ENST00000573521 4605 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
SMIM17P0DL12 AP1G2-201ENST00000308724 3298 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
SMIM17P0DL12 AC114271.1-201ENST00000612689 2813 ntBASIC10.82□□□□□ -0.68
SMIM17P0DL12 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC10.82□□□□□ -0.68
SMIM17P0DL12 RBM33-207ENST00000401878 10149 ntAPPRIS P2 TSL 5 BASIC10.82□□□□□ -0.68
SMIM17P0DL12 CLIC4-201ENST00000374379 4346 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms