Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 AC024293.1-201ENST00000467930 498 ntBASIC15.5■□□□□ 0.07
CHRNA1P02708 RN7SL375P-201ENST00000492442 298 ntBASIC15.5■□□□□ 0.07
CHRNA1P02708 TMEM220-AS1-207ENST00000584714 541 ntTSL 4 BASIC15.5■□□□□ 0.07
CHRNA1P02708 AC073592.2-201ENST00000623062 780 ntBASIC15.5■□□□□ 0.07
CHRNA1P02708 LINC00969-257ENST00000625632 898 ntTSL 5 BASIC15.5■□□□□ 0.07
CHRNA1P02708 C1orf232-202ENST00000635463 466 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
CHRNA1P02708 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
CHRNA1P02708 KRT8P43-201ENST00000406052 1458 ntBASIC15.5■□□□□ 0.07
CHRNA1P02708 GUCY1B2-205ENST00000532104 1912 ntTSL 2 BASIC15.5■□□□□ 0.07
CHRNA1P02708 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CHRNA1P02708 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CHRNA1P02708 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CHRNA1P02708 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC15.5■□□□□ 0.07
CHRNA1P02708 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
CHRNA1P02708 Z84468.1-201ENST00000626321 1408 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CHRNA1P02708 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CHRNA1P02708 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
CHRNA1P02708 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC15.5■□□□□ 0.07
CHRNA1P02708 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CHRNA1P02708 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CHRNA1P02708 CYB5D2-203ENST00000575251 1588 ntTSL 2 BASIC15.49■□□□□ 0.07
CHRNA1P02708 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CHRNA1P02708 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
CHRNA1P02708 C12orf65-204ENST00000429587 1326 ntAPPRIS P2 TSL 2 BASIC15.49■□□□□ 0.07
CHRNA1P02708 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC15.49■□□□□ 0.07
CHRNA1P02708 TMEM45A-202ENST00000403410 1910 ntTSL 5 BASIC15.49■□□□□ 0.07
CHRNA1P02708 AC113367.3-201ENST00000508316 1912 ntBASIC15.49■□□□□ 0.07
CHRNA1P02708 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
CHRNA1P02708 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CHRNA1P02708 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CHRNA1P02708 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CHRNA1P02708 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CHRNA1P02708 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC15.49■□□□□ 0.07
CHRNA1P02708 SPATA8-201ENST00000328504 1083 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
CHRNA1P02708 FUNDC2P2-201ENST00000331369 1223 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CHRNA1P02708 MDS2-201ENST00000374555 1029 ntAPPRIS P5 TSL 1 (best) BASIC15.49■□□□□ 0.07
CHRNA1P02708 OR52M2P-201ENST00000414298 959 ntBASIC15.49■□□□□ 0.07
CHRNA1P02708 ACTG1P19-201ENST00000418987 1116 ntBASIC15.49■□□□□ 0.07
CHRNA1P02708 LINC02557-201ENST00000432249 477 ntTSL 3 BASIC15.49■□□□□ 0.07
CHRNA1P02708 PRRC2B-207ENST00000458550 899 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CHRNA1P02708 TMEM126A-203ENST00000528105 656 ntTSL 2 BASIC15.49■□□□□ 0.07
CHRNA1P02708 AC003982.2-201ENST00000536933 365 ntTSL 3 BASIC15.49■□□□□ 0.07
CHRNA1P02708 DNAJB13-203ENST00000537753 912 ntTSL 3 BASIC15.49■□□□□ 0.07
CHRNA1P02708 NT5C-204ENST00000578337 582 ntTSL 2 BASIC15.49■□□□□ 0.07
CHRNA1P02708 AC012073.1-201ENST00000606114 1108 ntBASIC15.49■□□□□ 0.07
CHRNA1P02708 HPX-213ENST00000615166 826 ntTSL 5 BASIC15.49■□□□□ 0.07
CHRNA1P02708 TP53-221ENST00000615910 1149 ntTSL 5 BASIC15.49■□□□□ 0.07
CHRNA1P02708 AL136040.2-201ENST00000618431 1130 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CHRNA1P02708 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
CHRNA1P02708 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CHRNA1P02708 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
CHRNA1P02708 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
CHRNA1P02708 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CHRNA1P02708 AC090505.1-201ENST00000430515 1834 ntBASIC15.49■□□□□ 0.07
CHRNA1P02708 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
CHRNA1P02708 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CHRNA1P02708 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CHRNA1P02708 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
CHRNA1P02708 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC15.49■□□□□ 0.07
CHRNA1P02708 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC15.49■□□□□ 0.07
CHRNA1P02708 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CHRNA1P02708 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
CHRNA1P02708 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
CHRNA1P02708 ADPRH-205ENST00000478927 1501 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
CHRNA1P02708 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CHRNA1P02708 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
CHRNA1P02708 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CHRNA1P02708 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC15.48■□□□□ 0.07
CHRNA1P02708 CTBP2P8-201ENST00000422584 1330 ntBASIC15.48■□□□□ 0.07
CHRNA1P02708 ETNPPL-206ENST00000510706 1692 ntTSL 2 BASIC15.48■□□□□ 0.07
CHRNA1P02708 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC15.48■□□□□ 0.07
CHRNA1P02708 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CHRNA1P02708 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
CHRNA1P02708 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CHRNA1P02708 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CHRNA1P02708 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC15.48■□□□□ 0.07
CHRNA1P02708 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
CHRNA1P02708 GTF3C6-201ENST00000329970 952 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CHRNA1P02708 FAM163B-201ENST00000356873 1131 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CHRNA1P02708 TRBV4-1-201ENST00000390357 373 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
CHRNA1P02708 TRBV4-2-201ENST00000390392 455 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
CHRNA1P02708 LY6G6E-227ENST00000409239 776 ntAPPRIS ALT2 TSL 4 BASIC15.48■□□□□ 0.07
CHRNA1P02708 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
CHRNA1P02708 GRAMD1A-203ENST00000424536 808 ntTSL 2 BASIC15.48■□□□□ 0.07
CHRNA1P02708 HORMAD2-AS1-202ENST00000432568 727 ntTSL 3 BASIC15.48■□□□□ 0.07
CHRNA1P02708 FOXP4-AS1-202ENST00000432751 409 ntTSL 2 BASIC15.48■□□□□ 0.07
CHRNA1P02708 AC010234.1-201ENST00000494599 870 ntBASIC15.48■□□□□ 0.07
CHRNA1P02708 PGAM1P12-201ENST00000505622 748 ntBASIC15.48■□□□□ 0.07
CHRNA1P02708 NUDCD2-202ENST00000517501 448 ntTSL 5 BASIC15.48■□□□□ 0.07
CHRNA1P02708 CD59-210ENST00000528700 652 ntAPPRIS P2 TSL 2 BASIC15.48■□□□□ 0.07
CHRNA1P02708 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC15.48■□□□□ 0.07
CHRNA1P02708 RAP1B-216ENST00000537460 1072 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
CHRNA1P02708 TNNI1-205ENST00000555948 580 ntTSL 5 BASIC15.48■□□□□ 0.07
CHRNA1P02708 AC115099.1-201ENST00000570413 362 ntTSL 3 BASIC15.48■□□□□ 0.07
CHRNA1P02708 AC011444.1-201ENST00000587836 639 ntTSL 3 BASIC15.48■□□□□ 0.07
CHRNA1P02708 AL359091.4-201ENST00000610052 409 ntBASIC15.48■□□□□ 0.07
CHRNA1P02708 AL137793.2-201ENST00000632635 659 ntTSL 3 BASIC15.48■□□□□ 0.07
CHRNA1P02708 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
CHRNA1P02708 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CHRNA1P02708 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 71.5 ms