Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC20.95■□□□□ 0.94
RAPGEF3O95398 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
RAPGEF3O95398 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC20.95■□□□□ 0.94
RAPGEF3O95398 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC20.95■□□□□ 0.94
RAPGEF3O95398 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
RAPGEF3O95398 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RAPGEF3O95398 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC20.95■□□□□ 0.94
RAPGEF3O95398 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RAPGEF3O95398 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
RAPGEF3O95398 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC20.95■□□□□ 0.94
RAPGEF3O95398 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
RAPGEF3O95398 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RAPGEF3O95398 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
RAPGEF3O95398 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
RAPGEF3O95398 PNLIP-201ENST00000369221 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RAPGEF3O95398 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RAPGEF3O95398 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RAPGEF3O95398 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC20.94■□□□□ 0.94
RAPGEF3O95398 NME7-203ENST00000472647 1590 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
RAPGEF3O95398 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
RAPGEF3O95398 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RAPGEF3O95398 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RAPGEF3O95398 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
RAPGEF3O95398 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RAPGEF3O95398 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
RAPGEF3O95398 CYCS-203ENST00000409764 799 ntAPPRIS P1 TSL 3 BASIC20.94■□□□□ 0.94
RAPGEF3O95398 AC026884.1-201ENST00000418296 457 ntBASIC20.94■□□□□ 0.94
RAPGEF3O95398 LINC01824-201ENST00000436082 528 ntTSL 4 BASIC20.94■□□□□ 0.94
RAPGEF3O95398 RN7SL69P-201ENST00000468423 272 ntBASIC20.94■□□□□ 0.94
RAPGEF3O95398 MIR4640-201ENST00000581824 90 ntBASIC20.94■□□□□ 0.94
RAPGEF3O95398 AC008982.2-201ENST00000600473 493 ntTSL 5 BASIC20.94■□□□□ 0.94
RAPGEF3O95398 AC008555.6-201ENST00000605047 458 ntTSL 2 BASIC20.94■□□□□ 0.94
RAPGEF3O95398 SNX20-205ENST00000610485 557 ntTSL 5 BASIC20.94■□□□□ 0.94
RAPGEF3O95398 Metazoa_SRP.173-201ENST00000614020 273 ntBASIC20.94■□□□□ 0.94
RAPGEF3O95398 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
RAPGEF3O95398 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC20.94■□□□□ 0.94
RAPGEF3O95398 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC20.94■□□□□ 0.94
RAPGEF3O95398 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC20.94■□□□□ 0.94
RAPGEF3O95398 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RAPGEF3O95398 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
RAPGEF3O95398 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC20.94■□□□□ 0.94
RAPGEF3O95398 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
RAPGEF3O95398 HSPA1L-201ENST00000375654 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RAPGEF3O95398 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC20.94■□□□□ 0.94
RAPGEF3O95398 ZFP1-201ENST00000332307 1502 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
RAPGEF3O95398 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RAPGEF3O95398 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
RAPGEF3O95398 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RAPGEF3O95398 LYRM1-202ENST00000396052 1659 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RAPGEF3O95398 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
RAPGEF3O95398 GLIPR1L2-201ENST00000320460 1729 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
RAPGEF3O95398 POLL-206ENST00000370172 2308 ntTSL 2 BASIC20.93■□□□□ 0.94
RAPGEF3O95398 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
RAPGEF3O95398 FUNDC1-201ENST00000378045 1196 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RAPGEF3O95398 C3orf84-201ENST00000432035 669 ntAPPRIS ALT1 TSL 5 BASIC20.93■□□□□ 0.94
RAPGEF3O95398 AC092865.2-201ENST00000439409 971 ntBASIC20.93■□□□□ 0.94
RAPGEF3O95398 OR4A49P-201ENST00000527050 632 ntBASIC20.93■□□□□ 0.94
RAPGEF3O95398 SLC25A3-206ENST00000547534 556 ntTSL 2 BASIC20.93■□□□□ 0.94
RAPGEF3O95398 ABCD1P3-201ENST00000562927 605 ntBASIC20.93■□□□□ 0.94
RAPGEF3O95398 LIMD2-210ENST00000582055 509 ntTSL 2 BASIC20.93■□□□□ 0.94
RAPGEF3O95398 AL035427.1-201ENST00000602441 387 ntTSL 3 BASIC20.93■□□□□ 0.94
RAPGEF3O95398 CHD2-218ENST00000629346 1249 ntTSL 5 BASIC20.93■□□□□ 0.94
RAPGEF3O95398 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RAPGEF3O95398 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
RAPGEF3O95398 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
RAPGEF3O95398 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
RAPGEF3O95398 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RAPGEF3O95398 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC20.92■□□□□ 0.94
RAPGEF3O95398 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC20.92■□□□□ 0.94
RAPGEF3O95398 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RAPGEF3O95398 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RAPGEF3O95398 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RAPGEF3O95398 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC20.92■□□□□ 0.94
RAPGEF3O95398 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RAPGEF3O95398 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
RAPGEF3O95398 PMM1-201ENST00000216259 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RAPGEF3O95398 RPSAP6-201ENST00000417882 882 ntBASIC20.92■□□□□ 0.94
RAPGEF3O95398 AL161727.1-201ENST00000457409 530 ntBASIC20.92■□□□□ 0.94
RAPGEF3O95398 RNA5SP288-201ENST00000516075 93 ntBASIC20.92■□□□□ 0.94
RAPGEF3O95398 RMDN1-218ENST00000523911 950 ntTSL 2 BASIC20.92■□□□□ 0.94
RAPGEF3O95398 EEF1AKMT3-203ENST00000548256 561 ntTSL 4 BASIC20.92■□□□□ 0.94
RAPGEF3O95398 AC090907.2-201ENST00000559857 720 ntTSL 3 BASIC20.92■□□□□ 0.94
RAPGEF3O95398 CYB5D2-202ENST00000573984 495 ntTSL 4 BASIC20.92■□□□□ 0.94
RAPGEF3O95398 AC021321.1-201ENST00000607397 1113 ntBASIC20.92■□□□□ 0.94
RAPGEF3O95398 AC083798.2-202ENST00000609469 553 ntTSL 4 BASIC20.92■□□□□ 0.94
RAPGEF3O95398 NR1I2-206ENST00000638727 1194 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
RAPGEF3O95398 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RAPGEF3O95398 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RAPGEF3O95398 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
RAPGEF3O95398 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC20.92■□□□□ 0.94
RAPGEF3O95398 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
RAPGEF3O95398 PPP1R32-201ENST00000338608 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RAPGEF3O95398 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
RAPGEF3O95398 PPARG-205ENST00000397010 2017 ntAPPRIS ALT1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RAPGEF3O95398 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RAPGEF3O95398 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
RAPGEF3O95398 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC20.92■□□□□ 0.94
RAPGEF3O95398 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RAPGEF3O95398 AC138035.3-201ENST00000622706 2791 ntBASIC20.91■□□□□ 0.94
RAPGEF3O95398 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC20.91■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 55 ms