Protein–RNA interactions for Protein: O75503

CLN5, Ceroid-lipofuscinosis neuronal protein 5, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5O75503 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC11.9□□□□□ -0.5
CLN5O75503 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
CLN5O75503 FAM90A12P-201ENST00000519497 2375 ntBASIC11.9□□□□□ -0.5
CLN5O75503 FAM90A24P-201ENST00000520792 2369 ntBASIC11.9□□□□□ -0.5
CLN5O75503 HERC5-201ENST00000264350 3513 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
CLN5O75503 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
CLN5O75503 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC11.9□□□□□ -0.5
CLN5O75503 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC11.9□□□□□ -0.5
CLN5O75503 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
CLN5O75503 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
CLN5O75503 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
CLN5O75503 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
CLN5O75503 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
CLN5O75503 VMA21-202ENST00000370361 693 ntTSL 5 BASIC11.9□□□□□ -0.5
CLN5O75503 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC11.9□□□□□ -0.5
CLN5O75503 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
CLN5O75503 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC11.9□□□□□ -0.5
CLN5O75503 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC11.9□□□□□ -0.5
CLN5O75503 AC009477.1-201ENST00000452936 217 ntBASIC11.9□□□□□ -0.5
CLN5O75503 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC11.9□□□□□ -0.5
CLN5O75503 RASA4-203ENST00000461209 3244 ntTSL 2 BASIC11.9□□□□□ -0.5
CLN5O75503 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
CLN5O75503 GUCY1B3-205ENST00000505764 2456 ntTSL 2 BASIC11.9□□□□□ -0.5
CLN5O75503 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
CLN5O75503 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC11.9□□□□□ -0.5
CLN5O75503 PATL2-208ENST00000560780 1863 ntAPPRIS ALT2 TSL 2 BASIC11.9□□□□□ -0.5
CLN5O75503 ANKRD20A1-201ENST00000562196 3379 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
CLN5O75503 PRR29-204ENST00000577953 565 ntTSL 4 BASIC11.9□□□□□ -0.5
CLN5O75503 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC11.9□□□□□ -0.5
CLN5O75503 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
CLN5O75503 DRC7-202ENST00000360716 3041 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
CLN5O75503 GPR173-201ENST00000332582 4485 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
CLN5O75503 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
CLN5O75503 KLHL38-201ENST00000325995 1982 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
CLN5O75503 SOGA1-201ENST00000237536 14371 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
CLN5O75503 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
CLN5O75503 STRA6-222ENST00000616000 2843 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
CLN5O75503 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
CLN5O75503 PHF13-201ENST00000377648 3681 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
CLN5O75503 HRC-201ENST00000252825 2385 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
CLN5O75503 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
CLN5O75503 HYOU1-220ENST00000617285 4529 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
CLN5O75503 PI4KB-203ENST00000368874 3934 ntAPPRIS ALT1 TSL 1 (best) BASIC11.9□□□□□ -0.51
CLN5O75503 GAP43-202ENST00000393780 1901 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
CLN5O75503 HNRNPUL1-207ENST00000595018 2794 ntTSL 2 BASIC11.9□□□□□ -0.51
CLN5O75503 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.51
CLN5O75503 DCAF13-201ENST00000297579 2642 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
CLN5O75503 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC11.89□□□□□ -0.51
CLN5O75503 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
CLN5O75503 PDE2A-218ENST00000540345 3027 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
CLN5O75503 HPS1-215ENST00000613394 3714 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
CLN5O75503 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC11.89□□□□□ -0.51
CLN5O75503 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
CLN5O75503 PDZD4-209ENST00000544474 3418 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
CLN5O75503 KIAA0930-201ENST00000251993 2723 ntTSL 2 BASIC11.89□□□□□ -0.51
CLN5O75503 USP17L7-201ENST00000530447 2022 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
CLN5O75503 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC11.89□□□□□ -0.51
CLN5O75503 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC11.89□□□□□ -0.51
CLN5O75503 PTPRVP-205ENST00000641549 5067 ntBASIC11.89□□□□□ -0.51
CLN5O75503 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC11.89□□□□□ -0.51
CLN5O75503 UBE2I-204ENST00000397515 3109 ntAPPRIS P1 TSL 3 BASIC11.89□□□□□ -0.51
CLN5O75503 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
CLN5O75503 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
CLN5O75503 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
CLN5O75503 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
CLN5O75503 TMEM233-201ENST00000426426 3081 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
CLN5O75503 PTCHD3-201ENST00000438700 2529 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
CLN5O75503 SMG9-201ENST00000270066 5510 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
CLN5O75503 LRPAP1-202ENST00000500728 7819 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
CLN5O75503 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
CLN5O75503 DNAJC14-202ENST00000317287 2774 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
CLN5O75503 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
CLN5O75503 ATN1-201ENST00000356654 4351 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
CLN5O75503 BCAM-211ENST00000611077 3430 ntTSL 5 BASIC11.89□□□□□ -0.51
CLN5O75503 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
CLN5O75503 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
CLN5O75503 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
CLN5O75503 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC11.89□□□□□ -0.51
CLN5O75503 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC11.89□□□□□ -0.51
CLN5O75503 NINL-203ENST00000422516 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
CLN5O75503 TSSK5P-201ENST00000423978 907 ntBASIC11.89□□□□□ -0.51
CLN5O75503 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC11.89□□□□□ -0.51
CLN5O75503 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC11.89□□□□□ -0.51
CLN5O75503 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC11.89□□□□□ -0.51
CLN5O75503 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
CLN5O75503 GAPDHP40-201ENST00000505218 1006 ntBASIC11.89□□□□□ -0.51
CLN5O75503 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
CLN5O75503 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC11.89□□□□□ -0.51
CLN5O75503 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC11.89□□□□□ -0.51
CLN5O75503 RPL28-205ENST00000558131 444 ntTSL 5 BASIC11.89□□□□□ -0.51
CLN5O75503 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC11.89□□□□□ -0.51
CLN5O75503 AC036164.1-201ENST00000570544 333 ntBASIC11.89□□□□□ -0.51
CLN5O75503 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC11.89□□□□□ -0.51
CLN5O75503 SH3TC1-201ENST00000245105 4226 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
CLN5O75503 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
CLN5O75503 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC11.89□□□□□ -0.51
CLN5O75503 AC009093.2-202ENST00000620513 2079 ntBASIC11.89□□□□□ -0.51
CLN5O75503 KRT74-203ENST00000549343 2858 ntTSL 5 BASIC11.89□□□□□ -0.51
CLN5O75503 TP73-203ENST00000357733 4899 ntTSL 5 BASIC11.89□□□□□ -0.51
CLN5O75503 FAM189A1-201ENST00000261275 4705 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 65.6 ms