Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
ZIC3O60481 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC12.92□□□□□ -0.34
ZIC3O60481 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
ZIC3O60481 FAM96A-203ENST00000557835 1536 ntTSL 2 BASIC12.92□□□□□ -0.34
ZIC3O60481 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
ZIC3O60481 BCAS4-201ENST00000358791 1378 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
ZIC3O60481 MPZL2-202ENST00000438295 1370 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
ZIC3O60481 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
ZIC3O60481 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
ZIC3O60481 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
ZIC3O60481 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
ZIC3O60481 TMEM45A-202ENST00000403410 1910 ntTSL 5 BASIC12.92□□□□□ -0.34
ZIC3O60481 ACVR1C-204ENST00000409680 1786 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
ZIC3O60481 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
ZIC3O60481 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
ZIC3O60481 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
ZIC3O60481 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
ZIC3O60481 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
ZIC3O60481 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
ZIC3O60481 KRT18P9-201ENST00000604826 1300 ntBASIC12.91□□□□□ -0.34
ZIC3O60481 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
ZIC3O60481 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC12.91□□□□□ -0.34
ZIC3O60481 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC12.91□□□□□ -0.34
ZIC3O60481 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
ZIC3O60481 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
ZIC3O60481 CYB5D2-203ENST00000575251 1588 ntTSL 2 BASIC12.91□□□□□ -0.34
ZIC3O60481 TBC1D3J-201ENST00000620719 1426 ntBASIC12.91□□□□□ -0.34
ZIC3O60481 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC12.91□□□□□ -0.34
ZIC3O60481 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
ZIC3O60481 SLC25A26-201ENST00000336733 1023 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
ZIC3O60481 DPCD-202ENST00000370151 858 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
ZIC3O60481 IGHV4-39-201ENST00000390619 425 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
ZIC3O60481 NACA-202ENST00000393891 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
ZIC3O60481 AC103592.1-201ENST00000394513 664 ntBASIC12.91□□□□□ -0.34
ZIC3O60481 PARVG-202ENST00000415224 999 ntTSL 2 BASIC12.91□□□□□ -0.34
ZIC3O60481 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC12.91□□□□□ -0.34
ZIC3O60481 AC131097.3-203ENST00000420272 1193 ntTSL 5 BASIC12.91□□□□□ -0.34
ZIC3O60481 AC007274.2-201ENST00000421675 662 ntBASIC12.91□□□□□ -0.34
ZIC3O60481 AC254562.2-201ENST00000428786 667 ntTSL 3 BASIC12.91□□□□□ -0.34
ZIC3O60481 AL591684.1-201ENST00000434533 234 ntTSL 5 BASIC12.91□□□□□ -0.34
ZIC3O60481 AL080250.1-201ENST00000438676 445 ntTSL 5 BASIC12.91□□□□□ -0.34
ZIC3O60481 NAGK-204ENST00000443872 878 ntTSL 3 BASIC12.91□□□□□ -0.34
ZIC3O60481 AL136982.2-201ENST00000451760 234 ntTSL 5 BASIC12.91□□□□□ -0.34
ZIC3O60481 WDYHV1-206ENST00000523356 869 ntTSL 3 BASIC12.91□□□□□ -0.34
ZIC3O60481 TMEM223-202ENST00000525631 736 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
ZIC3O60481 AC011603.2-203ENST00000547387 897 ntTSL 3 BASIC12.91□□□□□ -0.34
ZIC3O60481 NME1-NME2-203ENST00000555572 1193 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
ZIC3O60481 ANKRD11-208ENST00000563291 593 ntTSL 5 BASIC12.91□□□□□ -0.34
ZIC3O60481 PPCDC-205ENST00000563393 1149 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
ZIC3O60481 PPCDC-208ENST00000567336 892 ntTSL 5 BASIC12.91□□□□□ -0.34
ZIC3O60481 AL133499.1-201ENST00000596207 608 ntBASIC12.91□□□□□ -0.34
ZIC3O60481 AC006064.4-201ENST00000602946 422 ntTSL 2 BASIC12.91□□□□□ -0.34
ZIC3O60481 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC12.91□□□□□ -0.34
ZIC3O60481 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
ZIC3O60481 TCAM1P-207ENST00000485295 1537 ntBASIC12.91□□□□□ -0.34
ZIC3O60481 AC138761.4-201ENST00000578881 1514 ntTSL 3 BASIC12.91□□□□□ -0.34
ZIC3O60481 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC12.91□□□□□ -0.34
ZIC3O60481 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC12.91□□□□□ -0.34
ZIC3O60481 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
ZIC3O60481 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
ZIC3O60481 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC12.91□□□□□ -0.34
ZIC3O60481 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
ZIC3O60481 ORC6-201ENST00000219097 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
ZIC3O60481 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC12.91□□□□□ -0.34
ZIC3O60481 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
ZIC3O60481 TMEM144-209ENST00000509278 1633 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
ZIC3O60481 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
ZIC3O60481 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC12.91□□□□□ -0.34
ZIC3O60481 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC12.91□□□□□ -0.34
ZIC3O60481 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
ZIC3O60481 RPL13AP3-202ENST00000494676 1473 ntBASIC12.91□□□□□ -0.34
ZIC3O60481 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC12.91□□□□□ -0.34
ZIC3O60481 OLFML3-203ENST00000393300 1961 ntTSL 3 BASIC12.9□□□□□ -0.34
ZIC3O60481 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
ZIC3O60481 SHMT1P1-201ENST00000419974 1312 ntBASIC12.9□□□□□ -0.34
ZIC3O60481 SMARCE1-205ENST00000431889 1569 ntTSL 2 BASIC12.9□□□□□ -0.34
ZIC3O60481 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
ZIC3O60481 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
ZIC3O60481 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
ZIC3O60481 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
ZIC3O60481 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
ZIC3O60481 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
ZIC3O60481 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
ZIC3O60481 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
ZIC3O60481 MOGAT2-201ENST00000198801 1404 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
ZIC3O60481 CTSL-201ENST00000340342 1436 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
ZIC3O60481 KRT8P31-201ENST00000504812 1408 ntBASIC12.9□□□□□ -0.34
ZIC3O60481 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
ZIC3O60481 TGOLN2-204ENST00000409015 2276 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
ZIC3O60481 GOLGA8VP-201ENST00000559009 1798 ntBASIC12.9□□□□□ -0.34
ZIC3O60481 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC12.9□□□□□ -0.34
ZIC3O60481 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
ZIC3O60481 C6orf52-201ENST00000259983 619 ntAPPRIS P2 TSL 5 BASIC12.9□□□□□ -0.34
ZIC3O60481 C19orf18-201ENST00000314391 915 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
ZIC3O60481 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
ZIC3O60481 TCEAL6-201ENST00000372773 983 ntAPPRIS P1 TSL 3 BASIC12.9□□□□□ -0.34
ZIC3O60481 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
ZIC3O60481 TMEM216-202ENST00000398979 908 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
ZIC3O60481 AC012506.3-201ENST00000415245 892 ntTSL 3 BASIC12.9□□□□□ -0.34
ZIC3O60481 AL589843.1-201ENST00000423924 425 ntTSL 2 BASIC12.9□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms