Protein–RNA interactions for Protein: A7E2U8

C4orf47, UPF0602 protein C4orf47, humanhuman

Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf47A7E2U8 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
C4orf47A7E2U8 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
C4orf47A7E2U8 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC14.03□□□□□ -0.16
C4orf47A7E2U8 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
C4orf47A7E2U8 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC14.03□□□□□ -0.16
C4orf47A7E2U8 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
C4orf47A7E2U8 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
C4orf47A7E2U8 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC14.03□□□□□ -0.16
C4orf47A7E2U8 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC14.03□□□□□ -0.16
C4orf47A7E2U8 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC14.03□□□□□ -0.16
C4orf47A7E2U8 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
C4orf47A7E2U8 TNNT3-201ENST00000278317 1210 ntAPPRIS P3 TSL 5 BASIC14.03□□□□□ -0.16
C4orf47A7E2U8 TNNT3-207ENST00000381589 1060 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
C4orf47A7E2U8 KRTAP2-2-201ENST00000398477 733 ntAPPRIS P2 BASIC14.03□□□□□ -0.16
C4orf47A7E2U8 AC112721.1-201ENST00000409162 588 ntTSL 3 BASIC14.03□□□□□ -0.16
C4orf47A7E2U8 TPRKB-203ENST00000409716 816 ntTSL 5 BASIC14.03□□□□□ -0.16
C4orf47A7E2U8 AL451105.2-201ENST00000413763 1234 ntTSL 5 BASIC14.03□□□□□ -0.16
C4orf47A7E2U8 IGLV9-49-201ENST00000427632 409 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
C4orf47A7E2U8 ST13P19-201ENST00000442505 1124 ntBASIC14.03□□□□□ -0.16
C4orf47A7E2U8 CSAG1-204ENST00000452779 627 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
C4orf47A7E2U8 AC122719.1-201ENST00000507989 559 ntTSL 4 BASIC14.03□□□□□ -0.16
C4orf47A7E2U8 AC090136.2-201ENST00000517809 420 ntBASIC14.03□□□□□ -0.16
C4orf47A7E2U8 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC14.03□□□□□ -0.16
C4orf47A7E2U8 ZNF576-205ENST00000529930 830 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
C4orf47A7E2U8 AC016266.1-201ENST00000557558 729 ntTSL 3 BASIC14.03□□□□□ -0.16
C4orf47A7E2U8 TRMT112P3-201ENST00000580149 358 ntBASIC14.03□□□□□ -0.16
C4orf47A7E2U8 AC008972.2-201ENST00000606587 494 ntBASIC14.03□□□□□ -0.16
C4orf47A7E2U8 HELLS-212ENST00000630929 400 ntTSL 5 BASIC14.03□□□□□ -0.16
C4orf47A7E2U8 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
C4orf47A7E2U8 IQCJ-201ENST00000397832 1460 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
C4orf47A7E2U8 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC14.03□□□□□ -0.16
C4orf47A7E2U8 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
C4orf47A7E2U8 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC14.03□□□□□ -0.16
C4orf47A7E2U8 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
C4orf47A7E2U8 AC010096.1-201ENST00000443897 1709 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
C4orf47A7E2U8 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
C4orf47A7E2U8 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC14.03□□□□□ -0.16
C4orf47A7E2U8 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC14.03□□□□□ -0.16
C4orf47A7E2U8 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
C4orf47A7E2U8 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC14.03□□□□□ -0.16
C4orf47A7E2U8 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
C4orf47A7E2U8 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC14.03□□□□□ -0.16
C4orf47A7E2U8 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
C4orf47A7E2U8 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC14.03□□□□□ -0.16
C4orf47A7E2U8 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
C4orf47A7E2U8 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
C4orf47A7E2U8 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
C4orf47A7E2U8 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
C4orf47A7E2U8 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
C4orf47A7E2U8 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.16
C4orf47A7E2U8 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
C4orf47A7E2U8 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
C4orf47A7E2U8 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
C4orf47A7E2U8 ARMC8-213ENST00000470821 1656 ntTSL 5 BASIC14.02□□□□□ -0.16
C4orf47A7E2U8 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC14.02□□□□□ -0.16
C4orf47A7E2U8 PAIP2-201ENST00000265192 1459 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
C4orf47A7E2U8 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
C4orf47A7E2U8 TMEM176B-204ENST00000447204 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
C4orf47A7E2U8 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
C4orf47A7E2U8 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
C4orf47A7E2U8 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
C4orf47A7E2U8 TMEM95-202ENST00000389982 1191 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
C4orf47A7E2U8 RBM4-203ENST00000398692 921 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
C4orf47A7E2U8 VCX3A-202ENST00000398729 808 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
C4orf47A7E2U8 GYPC-203ENST00000409836 932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
C4orf47A7E2U8 XG-202ENST00000419513 979 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
C4orf47A7E2U8 FTCDNL1-203ENST00000420922 772 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
C4orf47A7E2U8 ACYP2-204ENST00000422521 1115 ntTSL 5 BASIC14.02□□□□□ -0.17
C4orf47A7E2U8 AL157832.2-206ENST00000428178 601 ntTSL 3 BASIC14.02□□□□□ -0.17
C4orf47A7E2U8 AC006372.2-201ENST00000433660 292 ntTSL 3 BASIC14.02□□□□□ -0.17
C4orf47A7E2U8 AC092580.1-201ENST00000433998 658 ntBASIC14.02□□□□□ -0.17
C4orf47A7E2U8 AL663074.1-201ENST00000436642 299 ntTSL 3 BASIC14.02□□□□□ -0.17
C4orf47A7E2U8 BRI3P1-201ENST00000440440 378 ntBASIC14.02□□□□□ -0.17
C4orf47A7E2U8 AL583839.1-201ENST00000445280 691 ntTSL 3 BASIC14.02□□□□□ -0.17
C4orf47A7E2U8 S100A2-205ENST00000487430 752 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
C4orf47A7E2U8 ALG1L3P-201ENST00000503331 765 ntBASIC14.02□□□□□ -0.17
C4orf47A7E2U8 RBM4-207ENST00000506523 654 ntTSL 3 BASIC14.02□□□□□ -0.17
C4orf47A7E2U8 IMMP1L-202ENST00000526776 469 ntTSL 3 BASIC14.02□□□□□ -0.17
C4orf47A7E2U8 AC009779.3-204ENST00000549424 367 ntTSL 3 BASIC14.02□□□□□ -0.17
C4orf47A7E2U8 SNHG21-204ENST00000559366 674 ntTSL 2 BASIC14.02□□□□□ -0.17
C4orf47A7E2U8 FTLP5-201ENST00000586853 534 ntBASIC14.02□□□□□ -0.17
C4orf47A7E2U8 PTOV1-AS2-203ENST00000601893 719 ntTSL 4 BASIC14.02□□□□□ -0.17
C4orf47A7E2U8 LINC00969-294ENST00000627609 992 ntTSL 5 BASIC14.02□□□□□ -0.17
C4orf47A7E2U8 CD79B-201ENST00000006750 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
C4orf47A7E2U8 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
C4orf47A7E2U8 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
C4orf47A7E2U8 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
C4orf47A7E2U8 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
C4orf47A7E2U8 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
C4orf47A7E2U8 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC14.02□□□□□ -0.17
C4orf47A7E2U8 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
C4orf47A7E2U8 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
C4orf47A7E2U8 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
C4orf47A7E2U8 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
C4orf47A7E2U8 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC14.02□□□□□ -0.17
C4orf47A7E2U8 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC14.01□□□□□ -0.17
C4orf47A7E2U8 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
C4orf47A7E2U8 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
C4orf47A7E2U8 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
C4orf47A7E2U8 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms