Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 AFF1-201ENST00000307808 9390 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
RCL1Q9Y2P8 SCOC-210ENST00000608372 5129 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
RCL1Q9Y2P8 KCNMA1-291ENST00000640834 3664 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
RCL1Q9Y2P8 UGGT2-201ENST00000376712 2240 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
RCL1Q9Y2P8 TNNI1-202ENST00000361379 5413 ntAPPRIS P2 TSL 5 BASIC11.86□□□□□ -0.51
RCL1Q9Y2P8 ACIN1-202ENST00000338631 2445 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
RCL1Q9Y2P8 RAB3D-201ENST00000222120 4273 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
RCL1Q9Y2P8 RAB37-204ENST00000392613 2617 ntAPPRIS ALT1 TSL 2 BASIC11.86□□□□□ -0.51
RCL1Q9Y2P8 DMTN-220ENST00000523266 2735 ntTSL 5 BASIC11.86□□□□□ -0.51
RCL1Q9Y2P8 LINC00567-201ENST00000569854 3409 ntBASIC11.86□□□□□ -0.51
RCL1Q9Y2P8 JOSD1-201ENST00000216039 3648 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
RCL1Q9Y2P8 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
RCL1Q9Y2P8 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC11.86□□□□□ -0.51
RCL1Q9Y2P8 CMC4-201ENST00000369479 864 ntAPPRIS P1 TSL 3 BASIC11.86□□□□□ -0.51
RCL1Q9Y2P8 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
RCL1Q9Y2P8 MIR940-201ENST00000401276 94 ntBASIC11.86□□□□□ -0.51
RCL1Q9Y2P8 LSM5-207ENST00000410044 687 ntTSL 3 BASIC11.86□□□□□ -0.51
RCL1Q9Y2P8 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
RCL1Q9Y2P8 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC11.86□□□□□ -0.51
RCL1Q9Y2P8 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
RCL1Q9Y2P8 AC023141.5-201ENST00000458585 616 ntBASIC11.86□□□□□ -0.51
RCL1Q9Y2P8 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC11.86□□□□□ -0.51
RCL1Q9Y2P8 GCOM2-201ENST00000509133 1104 ntBASIC11.86□□□□□ -0.51
RCL1Q9Y2P8 AP000344.2-201ENST00000512987 629 ntBASIC11.86□□□□□ -0.51
RCL1Q9Y2P8 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC11.86□□□□□ -0.51
RCL1Q9Y2P8 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC11.86□□□□□ -0.51
RCL1Q9Y2P8 KRT18P8-201ENST00000581937 1246 ntBASIC11.86□□□□□ -0.51
RCL1Q9Y2P8 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC11.86□□□□□ -0.51
RCL1Q9Y2P8 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC11.86□□□□□ -0.51
RCL1Q9Y2P8 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC11.86□□□□□ -0.51
RCL1Q9Y2P8 BAP1-211ENST00000615113 489 ntBASIC11.86□□□□□ -0.51
RCL1Q9Y2P8 AP001002.3-201ENST00000623482 206 ntBASIC11.86□□□□□ -0.51
RCL1Q9Y2P8 BX539320.1-201ENST00000623759 877 ntBASIC11.86□□□□□ -0.51
RCL1Q9Y2P8 FAM122B-203ENST00000370790 4246 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
RCL1Q9Y2P8 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
RCL1Q9Y2P8 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC11.86□□□□□ -0.51
RCL1Q9Y2P8 DLX4-206ENST00000611342 1662 ntBASIC11.86□□□□□ -0.51
RCL1Q9Y2P8 SCN2B-201ENST00000278947 5826 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
RCL1Q9Y2P8 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
RCL1Q9Y2P8 DCAF6-201ENST00000312263 3186 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
RCL1Q9Y2P8 AC022497.1-201ENST00000624916 3691 ntBASIC11.86□□□□□ -0.51
RCL1Q9Y2P8 TP53INP2-202ENST00000374810 4184 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
RCL1Q9Y2P8 ANKRD30B-202ENST00000358984 4359 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
RCL1Q9Y2P8 TECPR1-204ENST00000447648 6564 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
RCL1Q9Y2P8 MTMR4-204ENST00000579925 5622 ntTSL 5 BASIC11.86□□□□□ -0.51
RCL1Q9Y2P8 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
RCL1Q9Y2P8 DPP8-204ENST00000358939 2822 ntTSL 2 BASIC11.86□□□□□ -0.51
RCL1Q9Y2P8 GLB1L-201ENST00000295759 2745 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
RCL1Q9Y2P8 C19orf44-203ENST00000594035 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
RCL1Q9Y2P8 CICP1-201ENST00000416803 2410 ntBASIC11.86□□□□□ -0.51
RCL1Q9Y2P8 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
RCL1Q9Y2P8 EWSAT1-201ENST00000415504 2214 ntTSL 2 BASIC11.86□□□□□ -0.51
RCL1Q9Y2P8 KIF12-201ENST00000374118 2001 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
RCL1Q9Y2P8 SGK2-203ENST00000373092 1906 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
RCL1Q9Y2P8 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
RCL1Q9Y2P8 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
RCL1Q9Y2P8 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
RCL1Q9Y2P8 SMIM12-206ENST00000521580 3454 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
RCL1Q9Y2P8 RAPGEF1-201ENST00000372189 6085 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
RCL1Q9Y2P8 TUBGCP5-208ENST00000620435 3342 ntTSL 2 BASIC11.85□□□□□ -0.51
RCL1Q9Y2P8 AC005394.2-201ENST00000592347 3113 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
RCL1Q9Y2P8 TVP23C-CDRT4-203ENST00000522212 2833 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
RCL1Q9Y2P8 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
RCL1Q9Y2P8 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
RCL1Q9Y2P8 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC11.85□□□□□ -0.51
RCL1Q9Y2P8 BAIAP3-203ENST00000421665 3875 ntTSL 2 BASIC11.85□□□□□ -0.51
RCL1Q9Y2P8 MCC-201ENST00000302475 8257 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
RCL1Q9Y2P8 TUBGCP4-201ENST00000260383 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC11.85□□□□□ -0.51
RCL1Q9Y2P8 C1S-202ENST00000360817 2635 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
RCL1Q9Y2P8 PCDHGA5-201ENST00000518069 4602 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
RCL1Q9Y2P8 TMC5-204ENST00000541464 3581 ntTSL 2 BASIC11.85□□□□□ -0.51
RCL1Q9Y2P8 TECTA-201ENST00000264037 6468 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
RCL1Q9Y2P8 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
RCL1Q9Y2P8 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
RCL1Q9Y2P8 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC11.85□□□□□ -0.51
RCL1Q9Y2P8 PGAM5P1-201ENST00000518923 814 ntBASIC11.85□□□□□ -0.51
RCL1Q9Y2P8 CCND1-203ENST00000536559 553 ntTSL 3 BASIC11.85□□□□□ -0.51
RCL1Q9Y2P8 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC11.85□□□□□ -0.51
RCL1Q9Y2P8 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC11.85□□□□□ -0.51
RCL1Q9Y2P8 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC11.85□□□□□ -0.51
RCL1Q9Y2P8 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC11.85□□□□□ -0.51
RCL1Q9Y2P8 AL049840.4-201ENST00000602422 811 ntBASIC11.85□□□□□ -0.51
RCL1Q9Y2P8 AL121894.2-201ENST00000602977 491 ntBASIC11.85□□□□□ -0.51
RCL1Q9Y2P8 AL603764.1-201ENST00000636452 321 ntBASIC11.85□□□□□ -0.51
RCL1Q9Y2P8 VHL-201ENST00000256474 3737 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
RCL1Q9Y2P8 KIZ-213ENST00000620891 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
RCL1Q9Y2P8 DHX34-201ENST00000328771 4372 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
RCL1Q9Y2P8 BDH1-203ENST00000392379 3546 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
RCL1Q9Y2P8 MYRIP-204ENST00000444716 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
RCL1Q9Y2P8 PEG10-205ENST00000612748 2585 ntAPPRIS P5 TSL 5 BASIC11.85□□□□□ -0.51
RCL1Q9Y2P8 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC11.85□□□□□ -0.51
RCL1Q9Y2P8 TOE1-201ENST00000372090 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
RCL1Q9Y2P8 IL21R-204ENST00000564089 3009 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
RCL1Q9Y2P8 ZNF419-202ENST00000347466 3654 ntAPPRIS P3 TSL 2 BASIC11.85□□□□□ -0.51
RCL1Q9Y2P8 MSMO1-201ENST00000261507 2269 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
RCL1Q9Y2P8 CAMKV-201ENST00000296471 2913 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
RCL1Q9Y2P8 PTPN5-205ENST00000477854 2826 ntTSL 5 BASIC11.85□□□□□ -0.51
RCL1Q9Y2P8 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
RCL1Q9Y2P8 BRAP-202ENST00000419234 4026 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
RCL1Q9Y2P8 ADCY4-202ENST00000418030 3353 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms