Protein–RNA interactions for Protein: Q9UPP1

PHF8, Histone lysine demethylase PHF8, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF8Q9UPP1 SLC47A1-206ENST00000571335 1415 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PHF8Q9UPP1 SNAPC2-206ENST00000597584 1413 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PHF8Q9UPP1 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PHF8Q9UPP1 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PHF8Q9UPP1 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PHF8Q9UPP1 AC073347.1-201ENST00000421633 2643 ntBASIC19.24■□□□□ 0.67
PHF8Q9UPP1 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
PHF8Q9UPP1 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC19.24■□□□□ 0.67
PHF8Q9UPP1 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PHF8Q9UPP1 SERPINA1-209ENST00000449399 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PHF8Q9UPP1 INSC-205ENST00000525218 1576 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PHF8Q9UPP1 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PHF8Q9UPP1 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PHF8Q9UPP1 RHOC-205ENST00000369636 786 ntTSL 2 BASIC19.24■□□□□ 0.67
PHF8Q9UPP1 RHOC-207ENST00000369638 1028 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
PHF8Q9UPP1 MOCS1-207ENST00000432280 1071 ntTSL 5 BASIC19.24■□□□□ 0.67
PHF8Q9UPP1 EEF1DP2-201ENST00000433698 843 ntBASIC19.24■□□□□ 0.67
PHF8Q9UPP1 PRKCZ-AS1-202ENST00000444529 622 ntTSL 3 BASIC19.24■□□□□ 0.67
PHF8Q9UPP1 AC025594.1-201ENST00000469533 543 ntBASIC19.24■□□□□ 0.67
PHF8Q9UPP1 AC025171.3-201ENST00000509036 472 ntTSL 2 BASIC19.24■□□□□ 0.67
PHF8Q9UPP1 AC022447.6-201ENST00000515522 438 ntBASIC19.24■□□□□ 0.67
PHF8Q9UPP1 AC078814.4-201ENST00000546650 327 ntBASIC19.24■□□□□ 0.67
PHF8Q9UPP1 AC073569.2-201ENST00000551995 354 ntTSL 5 BASIC19.24■□□□□ 0.67
PHF8Q9UPP1 HNRNPA1P16-201ENST00000575692 955 ntBASIC19.24■□□□□ 0.67
PHF8Q9UPP1 FAAP24-203ENST00000589646 836 ntTSL 3 BASIC19.24■□□□□ 0.67
PHF8Q9UPP1 GGNBP1-204ENST00000613113 887 ntBASIC19.24■□□□□ 0.67
PHF8Q9UPP1 Metazoa_SRP.127-201ENST00000614914 302 ntBASIC19.24■□□□□ 0.67
PHF8Q9UPP1 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PHF8Q9UPP1 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
PHF8Q9UPP1 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PHF8Q9UPP1 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PHF8Q9UPP1 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PHF8Q9UPP1 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
PHF8Q9UPP1 KCTD6-205ENST00000490264 1759 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
PHF8Q9UPP1 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
PHF8Q9UPP1 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC19.23■□□□□ 0.67
PHF8Q9UPP1 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
PHF8Q9UPP1 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PHF8Q9UPP1 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC19.23■□□□□ 0.67
PHF8Q9UPP1 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC19.23■□□□□ 0.67
PHF8Q9UPP1 AC022532.1-201ENST00000624563 1728 ntBASIC19.23■□□□□ 0.67
PHF8Q9UPP1 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
PHF8Q9UPP1 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PHF8Q9UPP1 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
PHF8Q9UPP1 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PHF8Q9UPP1 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PHF8Q9UPP1 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PHF8Q9UPP1 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC19.23■□□□□ 0.67
PHF8Q9UPP1 TSC22D3-202ENST00000372382 1216 ntTSL 3 BASIC19.23■□□□□ 0.67
PHF8Q9UPP1 HCRTR1-201ENST00000373705 1170 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PHF8Q9UPP1 ARSEP1-202ENST00000430152 499 ntTSL 3 BASIC19.23■□□□□ 0.67
PHF8Q9UPP1 AC023141.7-201ENST00000430646 407 ntBASIC19.23■□□□□ 0.67
PHF8Q9UPP1 AL022332.1-202ENST00000432495 426 ntTSL 3 BASIC19.23■□□□□ 0.67
PHF8Q9UPP1 BRI3P1-201ENST00000440440 378 ntBASIC19.23■□□□□ 0.67
PHF8Q9UPP1 AC078785.1-204ENST00000460707 764 ntTSL 3 BASIC19.23■□□□□ 0.67
PHF8Q9UPP1 RPS18P9-201ENST00000482817 460 ntBASIC19.23■□□□□ 0.67
PHF8Q9UPP1 LINC00301-203ENST00000527161 749 ntTSL 2 BASIC19.23■□□□□ 0.67
PHF8Q9UPP1 C12orf57-204ENST00000540506 551 ntTSL 2 BASIC19.23■□□□□ 0.67
PHF8Q9UPP1 AC010504.1-201ENST00000591311 585 ntTSL 3 BASIC19.23■□□□□ 0.67
PHF8Q9UPP1 ATF7-212ENST00000591397 860 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PHF8Q9UPP1 LINC01082-201ENST00000601250 441 ntTSL 2 BASIC19.23■□□□□ 0.67
PHF8Q9UPP1 MSRA-201ENST00000317173 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PHF8Q9UPP1 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC19.23■□□□□ 0.67
PHF8Q9UPP1 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PHF8Q9UPP1 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
PHF8Q9UPP1 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PHF8Q9UPP1 ZNF691-201ENST00000372502 1910 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
PHF8Q9UPP1 MECR-202ENST00000373791 2416 ntTSL 2 BASIC19.23■□□□□ 0.67
PHF8Q9UPP1 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
PHF8Q9UPP1 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC19.23■□□□□ 0.67
PHF8Q9UPP1 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC19.23■□□□□ 0.67
PHF8Q9UPP1 C7orf49-214ENST00000620897 1349 ntTSL 3 BASIC19.23■□□□□ 0.67
PHF8Q9UPP1 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
PHF8Q9UPP1 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PHF8Q9UPP1 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PHF8Q9UPP1 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC19.23■□□□□ 0.67
PHF8Q9UPP1 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PHF8Q9UPP1 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
PHF8Q9UPP1 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PHF8Q9UPP1 AC015909.5-201ENST00000624336 2266 ntBASIC19.22■□□□□ 0.67
PHF8Q9UPP1 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
PHF8Q9UPP1 GSN-209ENST00000449733 2702 ntTSL 2 BASIC19.22■□□□□ 0.67
PHF8Q9UPP1 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
PHF8Q9UPP1 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
PHF8Q9UPP1 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PHF8Q9UPP1 TMSB4X-202ENST00000380635 767 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
PHF8Q9UPP1 LINC01983-201ENST00000413586 574 ntTSL 2 BASIC19.22■□□□□ 0.67
PHF8Q9UPP1 LINC00339-202ENST00000416769 1077 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PHF8Q9UPP1 AL161733.1-201ENST00000421067 462 ntTSL 3 BASIC19.22■□□□□ 0.67
PHF8Q9UPP1 EFNA4-203ENST00000427683 1052 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
PHF8Q9UPP1 AC004895.1-203ENST00000428901 540 ntTSL 4 BASIC19.22■□□□□ 0.67
PHF8Q9UPP1 KLF3-AS1-203ENST00000504219 627 ntTSL 3 BASIC19.22■□□□□ 0.67
PHF8Q9UPP1 SNRPF-204ENST00000552085 815 ntTSL 3 BASIC19.22■□□□□ 0.67
PHF8Q9UPP1 MIAT_exon5_3.1-201ENST00000613656 377 ntBASIC19.22■□□□□ 0.67
PHF8Q9UPP1 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
PHF8Q9UPP1 AP2M1-207ENST00000439647 1950 ntAPPRIS ALT1 TSL 2 BASIC19.22■□□□□ 0.67
PHF8Q9UPP1 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PHF8Q9UPP1 CHRNA2-201ENST00000240132 1735 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
PHF8Q9UPP1 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PHF8Q9UPP1 USP39-220ENST00000613444 2161 ntTSL 2 BASIC19.22■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms