Protein–RNA interactions for Protein: Q9UHC9

NPC1L1, Niemann-Pick C1-like protein 1, humanhuman

Predictions only

Length 1,359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1Q9UHC9 SIRT2-219ENST00000613542 1170 ntTSL 5 BASIC19.05■□□□□ 0.64
NPC1L1Q9UHC9 NCF4-201ENST00000248899 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
NPC1L1Q9UHC9 MINDY4B-201ENST00000465419 1383 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
NPC1L1Q9UHC9 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
NPC1L1Q9UHC9 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
NPC1L1Q9UHC9 ATP6V0A1-206ENST00000585525 2679 ntTSL 2 BASIC19.04■□□□□ 0.64
NPC1L1Q9UHC9 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
NPC1L1Q9UHC9 AP4M1-204ENST00000421755 1572 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
NPC1L1Q9UHC9 IKBKG-208ENST00000611176 1654 ntTSL 2 BASIC19.04■□□□□ 0.64
NPC1L1Q9UHC9 AL117190.1-201ENST00000637474 1985 ntTSL 5 BASIC19.04■□□□□ 0.64
NPC1L1Q9UHC9 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
NPC1L1Q9UHC9 LINC01230-201ENST00000625222 3017 ntBASIC19.04■□□□□ 0.64
NPC1L1Q9UHC9 CROCCP1-201ENST00000426910 5675 ntBASIC19.04■□□□□ 0.64
NPC1L1Q9UHC9 PDXDC2P-206ENST00000534700 1315 ntBASIC19.04■□□□□ 0.64
NPC1L1Q9UHC9 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
NPC1L1Q9UHC9 SEC13-202ENST00000350697 1425 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
NPC1L1Q9UHC9 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
NPC1L1Q9UHC9 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
NPC1L1Q9UHC9 CETP-203ENST00000566128 1733 ntTSL 5 BASIC19.04■□□□□ 0.64
NPC1L1Q9UHC9 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC19.04■□□□□ 0.64
NPC1L1Q9UHC9 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
NPC1L1Q9UHC9 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC19.04■□□□□ 0.64
NPC1L1Q9UHC9 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC19.04■□□□□ 0.64
NPC1L1Q9UHC9 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
NPC1L1Q9UHC9 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
NPC1L1Q9UHC9 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
NPC1L1Q9UHC9 AL109924.1-201ENST00000444586 914 ntTSL 3 BASIC19.04■□□□□ 0.64
NPC1L1Q9UHC9 EFCAB10-201ENST00000460135 717 ntTSL 2 BASIC19.04■□□□□ 0.64
NPC1L1Q9UHC9 AC112487.1-201ENST00000498032 1097 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
NPC1L1Q9UHC9 AC145285.5-201ENST00000562217 361 ntBASIC19.04■□□□□ 0.64
NPC1L1Q9UHC9 AC242426.4-201ENST00000606856 573 ntTSL 5 BASIC19.04■□□□□ 0.64
NPC1L1Q9UHC9 AC091769.1-201ENST00000619576 568 ntBASIC19.04■□□□□ 0.64
NPC1L1Q9UHC9 AC025262.2-201ENST00000623975 1056 ntBASIC19.04■□□□□ 0.64
NPC1L1Q9UHC9 DSG1-202ENST00000462981 1857 ntTSL 2 BASIC19.04■□□□□ 0.64
NPC1L1Q9UHC9 RERG-201ENST00000256953 2264 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
NPC1L1Q9UHC9 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
NPC1L1Q9UHC9 HELLS-202ENST00000348459 3099 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
NPC1L1Q9UHC9 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC19.04■□□□□ 0.64
NPC1L1Q9UHC9 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
NPC1L1Q9UHC9 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
NPC1L1Q9UHC9 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
NPC1L1Q9UHC9 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
NPC1L1Q9UHC9 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
NPC1L1Q9UHC9 CDH16-201ENST00000299752 2954 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
NPC1L1Q9UHC9 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
NPC1L1Q9UHC9 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
NPC1L1Q9UHC9 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
NPC1L1Q9UHC9 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
NPC1L1Q9UHC9 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
NPC1L1Q9UHC9 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
NPC1L1Q9UHC9 LINC01535-206ENST00000592712 1699 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
NPC1L1Q9UHC9 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
NPC1L1Q9UHC9 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC19.03■□□□□ 0.64
NPC1L1Q9UHC9 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC19.03■□□□□ 0.64
NPC1L1Q9UHC9 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
NPC1L1Q9UHC9 AC091046.1-201ENST00000331871 207 ntBASIC19.03■□□□□ 0.64
NPC1L1Q9UHC9 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
NPC1L1Q9UHC9 SAT1-201ENST00000379251 801 ntTSL 2 BASIC19.03■□□□□ 0.64
NPC1L1Q9UHC9 SAT1-202ENST00000379253 909 ntTSL 2 BASIC19.03■□□□□ 0.64
NPC1L1Q9UHC9 SAT1-203ENST00000379254 868 ntTSL 3 BASIC19.03■□□□□ 0.64
NPC1L1Q9UHC9 SAT1-204ENST00000379270 1065 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
NPC1L1Q9UHC9 AL512430.1-201ENST00000392575 860 ntBASIC19.03■□□□□ 0.64
NPC1L1Q9UHC9 GS1-124K5.4-201ENST00000445681 540 ntTSL 2 BASIC19.03■□□□□ 0.64
NPC1L1Q9UHC9 AC007279.1-201ENST00000448547 837 ntBASIC19.03■□□□□ 0.64
NPC1L1Q9UHC9 Z99943.1-201ENST00000451545 718 ntTSL 3 BASIC19.03■□□□□ 0.64
NPC1L1Q9UHC9 RTN4RL2-203ENST00000533205 637 ntTSL 3 BASIC19.03■□□□□ 0.64
NPC1L1Q9UHC9 TNNI1-205ENST00000555948 580 ntTSL 5 BASIC19.03■□□□□ 0.64
NPC1L1Q9UHC9 AC090825.1-202ENST00000560059 665 ntTSL 3 BASIC19.03■□□□□ 0.64
NPC1L1Q9UHC9 LINC01543-201ENST00000578367 900 ntTSL 5 BASIC19.03■□□□□ 0.64
NPC1L1Q9UHC9 AL049840.2-201ENST00000602722 535 ntBASIC19.03■□□□□ 0.64
NPC1L1Q9UHC9 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
NPC1L1Q9UHC9 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC19.03■□□□□ 0.64
NPC1L1Q9UHC9 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
NPC1L1Q9UHC9 MS4A15-201ENST00000337911 1536 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
NPC1L1Q9UHC9 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
NPC1L1Q9UHC9 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
NPC1L1Q9UHC9 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
NPC1L1Q9UHC9 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC19.02■□□□□ 0.64
NPC1L1Q9UHC9 SYT4-205ENST00000590752 1765 ntTSL 2 BASIC19.02■□□□□ 0.64
NPC1L1Q9UHC9 HPSE2-206ENST00000628193 1760 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
NPC1L1Q9UHC9 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
NPC1L1Q9UHC9 LMAN2L-202ENST00000377079 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
NPC1L1Q9UHC9 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
NPC1L1Q9UHC9 PIGV-202ENST00000374145 2713 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
NPC1L1Q9UHC9 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
NPC1L1Q9UHC9 XRCC6-202ENST00000360079 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
NPC1L1Q9UHC9 PRR26-202ENST00000441152 2251 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
NPC1L1Q9UHC9 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC19.02■□□□□ 0.64
NPC1L1Q9UHC9 BCL2L13-206ENST00000399782 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
NPC1L1Q9UHC9 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
NPC1L1Q9UHC9 DDC-204ENST00000426377 1700 ntTSL 3 BASIC19.02■□□□□ 0.64
NPC1L1Q9UHC9 PES1P2-201ENST00000449745 1735 ntBASIC19.02■□□□□ 0.64
NPC1L1Q9UHC9 NUDT2-201ENST00000346365 960 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
NPC1L1Q9UHC9 NUDT1-203ENST00000356714 662 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
NPC1L1Q9UHC9 NUDT2-202ENST00000379155 1002 ntAPPRIS P1 TSL 3 BASIC19.02■□□□□ 0.64
NPC1L1Q9UHC9 IGHV1-3-201ENST00000390595 395 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
NPC1L1Q9UHC9 HLA-DMA-203ENST00000395305 777 ntBASIC19.02■□□□□ 0.64
NPC1L1Q9UHC9 NUDT1-204ENST00000397046 712 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
NPC1L1Q9UHC9 GGTLC4P-201ENST00000402176 664 ntBASIC19.02■□□□□ 0.64
NPC1L1Q9UHC9 CELP-201ENST00000411440 1249 ntTSL 5 BASIC19.02■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 60.5 ms