Protein–RNA interactions for Protein: Q9UBQ0

VPS29, Vacuolar protein sorting-associated protein 29, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29Q9UBQ0 MOV10L1-202ENST00000354853 1701 ntTSL 2 BASIC13.86□□□□□ -0.19
VPS29Q9UBQ0 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC13.86□□□□□ -0.19
VPS29Q9UBQ0 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
VPS29Q9UBQ0 TMEM132C-201ENST00000435159 4947 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
VPS29Q9UBQ0 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
VPS29Q9UBQ0 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
VPS29Q9UBQ0 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
VPS29Q9UBQ0 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
VPS29Q9UBQ0 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
VPS29Q9UBQ0 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
VPS29Q9UBQ0 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC13.86□□□□□ -0.19
VPS29Q9UBQ0 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC13.86□□□□□ -0.19
VPS29Q9UBQ0 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
VPS29Q9UBQ0 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
VPS29Q9UBQ0 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
VPS29Q9UBQ0 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
VPS29Q9UBQ0 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
VPS29Q9UBQ0 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
VPS29Q9UBQ0 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
VPS29Q9UBQ0 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
VPS29Q9UBQ0 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC13.85□□□□□ -0.19
VPS29Q9UBQ0 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
VPS29Q9UBQ0 GLB1L-202ENST00000392089 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
VPS29Q9UBQ0 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC13.85□□□□□ -0.19
VPS29Q9UBQ0 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC13.85□□□□□ -0.19
VPS29Q9UBQ0 COASY-211ENST00000590958 1976 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
VPS29Q9UBQ0 EPHA5-204ENST00000511294 5176 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
VPS29Q9UBQ0 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
VPS29Q9UBQ0 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
VPS29Q9UBQ0 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
VPS29Q9UBQ0 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC13.85□□□□□ -0.19
VPS29Q9UBQ0 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
VPS29Q9UBQ0 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
VPS29Q9UBQ0 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
VPS29Q9UBQ0 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
VPS29Q9UBQ0 HMOX2-216ENST00000613539 1703 ntTSL 5 BASIC13.85□□□□□ -0.19
VPS29Q9UBQ0 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
VPS29Q9UBQ0 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
VPS29Q9UBQ0 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC13.85□□□□□ -0.19
VPS29Q9UBQ0 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
VPS29Q9UBQ0 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
VPS29Q9UBQ0 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
VPS29Q9UBQ0 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
VPS29Q9UBQ0 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
VPS29Q9UBQ0 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC13.85□□□□□ -0.19
VPS29Q9UBQ0 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC13.85□□□□□ -0.19
VPS29Q9UBQ0 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC13.85□□□□□ -0.19
VPS29Q9UBQ0 AC079178.1-201ENST00000420915 656 ntBASIC13.85□□□□□ -0.19
VPS29Q9UBQ0 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC13.85□□□□□ -0.19
VPS29Q9UBQ0 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
VPS29Q9UBQ0 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC13.85□□□□□ -0.19
VPS29Q9UBQ0 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC13.85□□□□□ -0.19
VPS29Q9UBQ0 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC13.85□□□□□ -0.19
VPS29Q9UBQ0 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
VPS29Q9UBQ0 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
VPS29Q9UBQ0 AC009884.2-201ENST00000603110 324 ntBASIC13.85□□□□□ -0.19
VPS29Q9UBQ0 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
VPS29Q9UBQ0 EFHC1-230ENST00000637263 2089 ntTSL 5 BASIC13.85□□□□□ -0.19
VPS29Q9UBQ0 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
VPS29Q9UBQ0 ARHGEF10-207ENST00000520359 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
VPS29Q9UBQ0 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC13.85□□□□□ -0.19
VPS29Q9UBQ0 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
VPS29Q9UBQ0 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
VPS29Q9UBQ0 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
VPS29Q9UBQ0 HS3ST5-201ENST00000312719 3901 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
VPS29Q9UBQ0 AC015712.6-201ENST00000431060 5068 ntTSL 2 BASIC13.85□□□□□ -0.19
VPS29Q9UBQ0 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
VPS29Q9UBQ0 LAP3P2-201ENST00000454686 1454 ntBASIC13.85□□□□□ -0.19
VPS29Q9UBQ0 AOC1-201ENST00000360937 2649 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
VPS29Q9UBQ0 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
VPS29Q9UBQ0 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
VPS29Q9UBQ0 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
VPS29Q9UBQ0 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC13.84□□□□□ -0.19
VPS29Q9UBQ0 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
VPS29Q9UBQ0 AMT-239ENST00000636865 1914 ntTSL 5 BASIC13.84□□□□□ -0.19
VPS29Q9UBQ0 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC13.84□□□□□ -0.19
VPS29Q9UBQ0 ADAMTS7P1-201ENST00000613213 4793 ntBASIC13.84□□□□□ -0.19
VPS29Q9UBQ0 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
VPS29Q9UBQ0 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
VPS29Q9UBQ0 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
VPS29Q9UBQ0 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
VPS29Q9UBQ0 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
VPS29Q9UBQ0 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
VPS29Q9UBQ0 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
VPS29Q9UBQ0 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC13.84□□□□□ -0.19
VPS29Q9UBQ0 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
VPS29Q9UBQ0 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
VPS29Q9UBQ0 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
VPS29Q9UBQ0 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
VPS29Q9UBQ0 TPO-206ENST00000382269 1155 ntTSL 5 BASIC13.84□□□□□ -0.19
VPS29Q9UBQ0 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
VPS29Q9UBQ0 GSAP-205ENST00000430584 600 ntTSL 5 BASIC13.84□□□□□ -0.19
VPS29Q9UBQ0 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC13.84□□□□□ -0.19
VPS29Q9UBQ0 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC13.84□□□□□ -0.19
VPS29Q9UBQ0 AC104989.1-201ENST00000519711 778 ntBASIC13.84□□□□□ -0.19
VPS29Q9UBQ0 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
VPS29Q9UBQ0 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC13.84□□□□□ -0.19
VPS29Q9UBQ0 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
VPS29Q9UBQ0 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC13.84□□□□□ -0.19
VPS29Q9UBQ0 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC13.84□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 52.4 ms