Protein–RNA interactions for Protein: Q9HCN8

SDF2L1, Stromal cell-derived factor 2-like protein 1, humanhuman

Predictions only

Length 221 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2L1Q9HCN8 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC11.32□□□□□ -0.6
SDF2L1Q9HCN8 HOTTIP_1.1-201ENST00000620415 57 ntBASIC11.32□□□□□ -0.6
SDF2L1Q9HCN8 LINC00628-201ENST00000628516 1289 ntBASIC11.32□□□□□ -0.6
SDF2L1Q9HCN8 MNT-201ENST00000174618 4996 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
SDF2L1Q9HCN8 INTS3-204ENST00000435409 3597 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
SDF2L1Q9HCN8 KIF3A-208ENST00000618515 3333 ntTSL 5 BASIC11.32□□□□□ -0.6
SDF2L1Q9HCN8 PCDHB17P-202ENST00000623466 3066 ntBASIC11.32□□□□□ -0.6
SDF2L1Q9HCN8 YLPM1-207ENST00000552421 4899 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
SDF2L1Q9HCN8 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC11.32□□□□□ -0.6
SDF2L1Q9HCN8 LRRC41-206ENST00000615587 2842 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
SDF2L1Q9HCN8 PRKD1-201ENST00000331968 3726 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
SDF2L1Q9HCN8 PCID2-205ENST00000375477 1654 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
SDF2L1Q9HCN8 TRMT61A-202ENST00000389749 3229 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
SDF2L1Q9HCN8 C10orf90-202ENST00000356858 2995 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
SDF2L1Q9HCN8 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
SDF2L1Q9HCN8 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
SDF2L1Q9HCN8 BCL2L12-211ENST00000614495 1402 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
SDF2L1Q9HCN8 VRK3-209ENST00000594948 1847 ntAPPRIS P3 TSL 2 BASIC11.32□□□□□ -0.6
SDF2L1Q9HCN8 C9orf47-203ENST00000375851 4837 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
SDF2L1Q9HCN8 AP3M2-202ENST00000396926 3545 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
SDF2L1Q9HCN8 ALPL-206ENST00000539907 2241 ntTSL 2 BASIC11.32□□□□□ -0.6
SDF2L1Q9HCN8 CTNNB1-202ENST00000396183 3268 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
SDF2L1Q9HCN8 VAMP7-202ENST00000286448 2646 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
SDF2L1Q9HCN8 LEPROTL1-201ENST00000321250 3173 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
SDF2L1Q9HCN8 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
SDF2L1Q9HCN8 AC021218.1-201ENST00000377722 2536 ntTSL 2 BASIC11.32□□□□□ -0.6
SDF2L1Q9HCN8 COBLL1-225ENST00000629362 3868 ntAPPRIS ALT2 TSL 2 BASIC11.32□□□□□ -0.6
SDF2L1Q9HCN8 AC018445.4-201ENST00000624066 2291 ntBASIC11.32□□□□□ -0.6
SDF2L1Q9HCN8 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
SDF2L1Q9HCN8 EOGT-202ENST00000383701 4731 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
SDF2L1Q9HCN8 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
SDF2L1Q9HCN8 CIPC-201ENST00000361786 4486 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
SDF2L1Q9HCN8 ACO2-201ENST00000216254 2741 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
SDF2L1Q9HCN8 AMDHD2-202ENST00000302956 3273 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
SDF2L1Q9HCN8 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
SDF2L1Q9HCN8 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC11.31□□□□□ -0.6
SDF2L1Q9HCN8 ZBED2-201ENST00000317012 2311 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
SDF2L1Q9HCN8 MSH6-214ENST00000616033 3429 ntTSL 5 BASIC11.31□□□□□ -0.6
SDF2L1Q9HCN8 ATXN2L-205ENST00000395547 3981 ntAPPRIS P4 TSL 1 (best) BASIC11.31□□□□□ -0.6
SDF2L1Q9HCN8 ERAL1-201ENST00000254928 1925 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
SDF2L1Q9HCN8 DCAF13-201ENST00000297579 2642 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
SDF2L1Q9HCN8 CSNK1E-201ENST00000359867 2642 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
SDF2L1Q9HCN8 ZNF335-201ENST00000322927 4430 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
SDF2L1Q9HCN8 WDFY2-203ENST00000612477 6932 ntTSL 2 BASIC11.31□□□□□ -0.6
SDF2L1Q9HCN8 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC11.31□□□□□ -0.6
SDF2L1Q9HCN8 GFPT2-201ENST00000253778 3093 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
SDF2L1Q9HCN8 ERAP1-201ENST00000296754 5495 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
SDF2L1Q9HCN8 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
SDF2L1Q9HCN8 UHMK1-203ENST00000538489 8446 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
SDF2L1Q9HCN8 DUOX2-205ENST00000603300 6345 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
SDF2L1Q9HCN8 TRMT1L-201ENST00000367506 4392 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
SDF2L1Q9HCN8 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
SDF2L1Q9HCN8 CDK5RAP1-202ENST00000346416 2122 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
SDF2L1Q9HCN8 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC11.31□□□□□ -0.6
SDF2L1Q9HCN8 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
SDF2L1Q9HCN8 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
SDF2L1Q9HCN8 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC11.31□□□□□ -0.6
SDF2L1Q9HCN8 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC11.31□□□□□ -0.6
SDF2L1Q9HCN8 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
SDF2L1Q9HCN8 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC11.31□□□□□ -0.6
SDF2L1Q9HCN8 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
SDF2L1Q9HCN8 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC11.31□□□□□ -0.6
SDF2L1Q9HCN8 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC11.31□□□□□ -0.6
SDF2L1Q9HCN8 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC11.31□□□□□ -0.6
SDF2L1Q9HCN8 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC11.31□□□□□ -0.6
SDF2L1Q9HCN8 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
SDF2L1Q9HCN8 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC11.31□□□□□ -0.6
SDF2L1Q9HCN8 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
SDF2L1Q9HCN8 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC11.31□□□□□ -0.6
SDF2L1Q9HCN8 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC11.31□□□□□ -0.6
SDF2L1Q9HCN8 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC11.31□□□□□ -0.6
SDF2L1Q9HCN8 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
SDF2L1Q9HCN8 AL033527.5-202ENST00000641632 1098 ntBASIC11.31□□□□□ -0.6
SDF2L1Q9HCN8 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
SDF2L1Q9HCN8 PPP1R11-205ENST00000376772 1731 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
SDF2L1Q9HCN8 RBM15-202ENST00000487146 3316 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
SDF2L1Q9HCN8 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC11.31□□□□□ -0.6
SDF2L1Q9HCN8 PSKH1-201ENST00000291041 3481 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
SDF2L1Q9HCN8 AC016738.1-201ENST00000452364 3485 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
SDF2L1Q9HCN8 VAMP2-201ENST00000316509 2153 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
SDF2L1Q9HCN8 YWHAZ-206ENST00000395957 5248 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
SDF2L1Q9HCN8 SUPV3L1-201ENST00000359655 2484 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
SDF2L1Q9HCN8 MTHFSD-204ENST00000546093 2451 ntTSL 2 BASIC11.31□□□□□ -0.6
SDF2L1Q9HCN8 H1FX-AS1-201ENST00000383461 2600 ntTSL 2 BASIC11.31□□□□□ -0.6
SDF2L1Q9HCN8 ATG7-201ENST00000354449 4959 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
SDF2L1Q9HCN8 TRAK1-201ENST00000327628 5293 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
SDF2L1Q9HCN8 AC022497.1-201ENST00000624916 3691 ntBASIC11.31□□□□□ -0.6
SDF2L1Q9HCN8 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
SDF2L1Q9HCN8 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
SDF2L1Q9HCN8 UBE3A-226ENST00000637886 8725 ntAPPRIS ALT1 TSL 5 BASIC11.31□□□□□ -0.6
SDF2L1Q9HCN8 DAO-201ENST00000228476 1756 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
SDF2L1Q9HCN8 SDR9C7-201ENST00000293502 1765 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
SDF2L1Q9HCN8 PGM3-201ENST00000283977 2219 ntTSL 5 BASIC11.31□□□□□ -0.6
SDF2L1Q9HCN8 CDH8-201ENST00000299345 3728 ntTSL 5 BASIC11.31□□□□□ -0.6
SDF2L1Q9HCN8 TRIM3-203ENST00000525074 3044 ntAPPRIS P1 TSL 2 BASIC11.3□□□□□ -0.6
SDF2L1Q9HCN8 AC102953.2-201ENST00000609755 3026 ntBASIC11.3□□□□□ -0.6
SDF2L1Q9HCN8 GRIPAP1-215ENST00000622599 2881 ntTSL 5 BASIC11.3□□□□□ -0.6
SDF2L1Q9HCN8 TRPC7-202ENST00000378459 2406 ntTSL 5 BASIC11.3□□□□□ -0.6
SDF2L1Q9HCN8 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC11.3□□□□□ -0.6
SDF2L1Q9HCN8 AC004623.1-201ENST00000624592 2127 ntBASIC11.3□□□□□ -0.6
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms