Protein–RNA interactions for Protein: Q9C0H6

KLHL4, Kelch-like protein 4, humanhuman

Predictions only

Length 718 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL4Q9C0H6 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC14.04□□□□□ -0.16
KLHL4Q9C0H6 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
KLHL4Q9C0H6 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC14.04□□□□□ -0.16
KLHL4Q9C0H6 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC14.04□□□□□ -0.16
KLHL4Q9C0H6 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC14.04□□□□□ -0.16
KLHL4Q9C0H6 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
KLHL4Q9C0H6 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC14.04□□□□□ -0.16
KLHL4Q9C0H6 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC14.04□□□□□ -0.16
KLHL4Q9C0H6 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
KLHL4Q9C0H6 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC14.04□□□□□ -0.16
KLHL4Q9C0H6 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC14.04□□□□□ -0.16
KLHL4Q9C0H6 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC14.04□□□□□ -0.16
KLHL4Q9C0H6 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC14.04□□□□□ -0.16
KLHL4Q9C0H6 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC14.04□□□□□ -0.16
KLHL4Q9C0H6 LINC01115-203ENST00000606068 577 ntBASIC14.04□□□□□ -0.16
KLHL4Q9C0H6 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC14.04□□□□□ -0.16
KLHL4Q9C0H6 5S_rRNA.22-201ENST00000614916 106 ntBASIC14.04□□□□□ -0.16
KLHL4Q9C0H6 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
KLHL4Q9C0H6 PRR29-202ENST00000412177 3127 ntAPPRIS P3 TSL 2 BASIC14.04□□□□□ -0.16
KLHL4Q9C0H6 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
KLHL4Q9C0H6 AL391825.1-201ENST00000457671 1364 ntBASIC14.04□□□□□ -0.16
KLHL4Q9C0H6 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
KLHL4Q9C0H6 C19orf12-209ENST00000623113 4242 ntTSL 2 BASIC14.04□□□□□ -0.16
KLHL4Q9C0H6 DLGAP4-202ENST00000340491 2392 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
KLHL4Q9C0H6 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
KLHL4Q9C0H6 TXNDC12-201ENST00000371626 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
KLHL4Q9C0H6 TRIB2-201ENST00000155926 4391 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
KLHL4Q9C0H6 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
KLHL4Q9C0H6 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
KLHL4Q9C0H6 SGTB-201ENST00000381007 5469 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
KLHL4Q9C0H6 CADM1-204ENST00000536727 3520 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
KLHL4Q9C0H6 COL16A1-202ENST00000373668 3643 ntTSL 2 BASIC14.04□□□□□ -0.16
KLHL4Q9C0H6 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
KLHL4Q9C0H6 PLIN4-201ENST00000301286 6353 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
KLHL4Q9C0H6 SMIM14-201ENST00000295958 6483 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
KLHL4Q9C0H6 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
KLHL4Q9C0H6 TUBB8-206ENST00000568584 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
KLHL4Q9C0H6 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC14.04□□□□□ -0.16
KLHL4Q9C0H6 ATP2C2-AS1-201ENST00000565700 2998 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
KLHL4Q9C0H6 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
KLHL4Q9C0H6 CPN1-201ENST00000370418 1863 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
KLHL4Q9C0H6 NISCH-212ENST00000488380 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
KLHL4Q9C0H6 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC14.03□□□□□ -0.16
KLHL4Q9C0H6 NRG1-201ENST00000287842 2035 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
KLHL4Q9C0H6 USP22-201ENST00000261497 5220 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
KLHL4Q9C0H6 CICP1-201ENST00000416803 2410 ntBASIC14.03□□□□□ -0.16
KLHL4Q9C0H6 VENTXP1-201ENST00000569334 2716 ntBASIC14.03□□□□□ -0.16
KLHL4Q9C0H6 USP19-207ENST00000434032 4677 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
KLHL4Q9C0H6 AC127496.1-201ENST00000576234 3133 ntTSL 2 BASIC14.03□□□□□ -0.16
KLHL4Q9C0H6 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC14.03□□□□□ -0.16
KLHL4Q9C0H6 PKIG-203ENST00000372887 769 ntTSL 3 BASIC14.03□□□□□ -0.16
KLHL4Q9C0H6 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC14.03□□□□□ -0.16
KLHL4Q9C0H6 AC244107.1-201ENST00000442033 332 ntBASIC14.03□□□□□ -0.16
KLHL4Q9C0H6 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
KLHL4Q9C0H6 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC14.03□□□□□ -0.16
KLHL4Q9C0H6 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC14.03□□□□□ -0.16
KLHL4Q9C0H6 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC14.03□□□□□ -0.16
KLHL4Q9C0H6 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC14.03□□□□□ -0.16
KLHL4Q9C0H6 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC14.03□□□□□ -0.16
KLHL4Q9C0H6 SAMD11P1-201ENST00000571429 661 ntBASIC14.03□□□□□ -0.16
KLHL4Q9C0H6 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC14.03□□□□□ -0.16
KLHL4Q9C0H6 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC14.03□□□□□ -0.16
KLHL4Q9C0H6 AC008494.3-201ENST00000606615 944 ntBASIC14.03□□□□□ -0.16
KLHL4Q9C0H6 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC14.03□□□□□ -0.16
KLHL4Q9C0H6 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC14.03□□□□□ -0.16
KLHL4Q9C0H6 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
KLHL4Q9C0H6 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
KLHL4Q9C0H6 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
KLHL4Q9C0H6 MKRN5P-201ENST00000445263 1467 ntBASIC14.03□□□□□ -0.16
KLHL4Q9C0H6 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
KLHL4Q9C0H6 WDFY1-201ENST00000233055 4660 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
KLHL4Q9C0H6 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
KLHL4Q9C0H6 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC14.03□□□□□ -0.16
KLHL4Q9C0H6 OCRL-201ENST00000357121 5138 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
KLHL4Q9C0H6 MTMR3-204ENST00000401950 6018 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
KLHL4Q9C0H6 AC011498.7-201ENST00000624986 2027 ntBASIC14.03□□□□□ -0.16
KLHL4Q9C0H6 CCND3-215ENST00000511642 2394 ntTSL 2 BASIC14.03□□□□□ -0.16
KLHL4Q9C0H6 CCNC-210ENST00000520429 2473 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
KLHL4Q9C0H6 ADD2-202ENST00000355733 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
KLHL4Q9C0H6 CDH16-204ENST00000565796 2694 ntTSL 2 BASIC14.03□□□□□ -0.16
KLHL4Q9C0H6 PTPN5-205ENST00000477854 2826 ntTSL 5 BASIC14.03□□□□□ -0.16
KLHL4Q9C0H6 ARHGEF2-201ENST00000313667 2958 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
KLHL4Q9C0H6 PPP3R1-201ENST00000234310 3023 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
KLHL4Q9C0H6 SECISBP2-202ENST00000375807 3462 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
KLHL4Q9C0H6 KCNMA1-291ENST00000640834 3664 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
KLHL4Q9C0H6 MAP7D2-201ENST00000379643 3918 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
KLHL4Q9C0H6 SLC35E2B-205ENST00000617444 6283 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
KLHL4Q9C0H6 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
KLHL4Q9C0H6 CCDC117-205ENST00000448492 3937 ntTSL 2 BASIC14.02□□□□□ -0.16
KLHL4Q9C0H6 LIPE-201ENST00000244289 3813 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
KLHL4Q9C0H6 CYTH1-215ENST00000591455 3286 ntAPPRIS P3 TSL 2 BASIC14.02□□□□□ -0.16
KLHL4Q9C0H6 BCL2-201ENST00000333681 3209 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
KLHL4Q9C0H6 PRKN-205ENST00000366897 2877 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
KLHL4Q9C0H6 SLC29A4-201ENST00000297195 2839 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
KLHL4Q9C0H6 FES-201ENST00000328850 2829 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
KLHL4Q9C0H6 GUCY1B3-205ENST00000505764 2456 ntTSL 2 BASIC14.02□□□□□ -0.16
KLHL4Q9C0H6 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC14.02□□□□□ -0.16
KLHL4Q9C0H6 ZNF683-205ENST00000436292 1712 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
KLHL4Q9C0H6 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC14.02□□□□□ -0.16
KLHL4Q9C0H6 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms