Protein–RNA interactions for Protein: Q9C0D0

PHACTR1, Phosphatase and actin regulator 1, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR1Q9C0D0 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
PHACTR1Q9C0D0 TASP1-201ENST00000337743 2352 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
PHACTR1Q9C0D0 DLGAP4-202ENST00000340491 2392 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
PHACTR1Q9C0D0 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
PHACTR1Q9C0D0 TNK1-207ENST00000576812 3023 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
PHACTR1Q9C0D0 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
PHACTR1Q9C0D0 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC14.69□□□□□ -0.06
PHACTR1Q9C0D0 CCT6B-201ENST00000314144 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
PHACTR1Q9C0D0 LGALS12-204ENST00000415491 1816 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
PHACTR1Q9C0D0 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
PHACTR1Q9C0D0 IL20RA-207ENST00000541547 3382 ntTSL 2 BASIC14.69□□□□□ -0.06
PHACTR1Q9C0D0 USP39-207ENST00000450066 2086 ntTSL 2 BASIC14.69□□□□□ -0.06
PHACTR1Q9C0D0 ROPN1-206ENST00000479867 2056 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
PHACTR1Q9C0D0 FAM200B-201ENST00000422728 2962 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
PHACTR1Q9C0D0 DPEP2-202ENST00000393847 1697 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
PHACTR1Q9C0D0 INMT-201ENST00000013222 2559 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
PHACTR1Q9C0D0 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
PHACTR1Q9C0D0 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
PHACTR1Q9C0D0 AC010141.1-201ENST00000411585 623 ntBASIC14.69□□□□□ -0.06
PHACTR1Q9C0D0 HNRNPA1P27-201ENST00000412087 955 ntBASIC14.69□□□□□ -0.06
PHACTR1Q9C0D0 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC14.69□□□□□ -0.06
PHACTR1Q9C0D0 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC14.69□□□□□ -0.06
PHACTR1Q9C0D0 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC14.69□□□□□ -0.06
PHACTR1Q9C0D0 WDR53-203ENST00000429115 683 ntTSL 2 BASIC14.69□□□□□ -0.06
PHACTR1Q9C0D0 HMGN1P19-201ENST00000436976 333 ntBASIC14.69□□□□□ -0.06
PHACTR1Q9C0D0 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC14.69□□□□□ -0.06
PHACTR1Q9C0D0 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
PHACTR1Q9C0D0 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
PHACTR1Q9C0D0 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
PHACTR1Q9C0D0 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC14.69□□□□□ -0.06
PHACTR1Q9C0D0 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
PHACTR1Q9C0D0 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC14.69□□□□□ -0.06
PHACTR1Q9C0D0 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC14.69□□□□□ -0.06
PHACTR1Q9C0D0 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC14.69□□□□□ -0.06
PHACTR1Q9C0D0 AC025279.2-201ENST00000569730 653 ntBASIC14.69□□□□□ -0.06
PHACTR1Q9C0D0 MIR5189-201ENST00000577370 114 ntBASIC14.69□□□□□ -0.06
PHACTR1Q9C0D0 AL033527.5-201ENST00000641382 801 ntBASIC14.69□□□□□ -0.06
PHACTR1Q9C0D0 HGNC:18790-201ENST00000397958 2650 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
PHACTR1Q9C0D0 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC14.69□□□□□ -0.06
PHACTR1Q9C0D0 ASS1-203ENST00000372393 1548 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
PHACTR1Q9C0D0 KARS-201ENST00000302445 2005 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
PHACTR1Q9C0D0 LDHAL6A-201ENST00000280706 2526 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
PHACTR1Q9C0D0 CATSPERE-201ENST00000366531 3038 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
PHACTR1Q9C0D0 CHFR-205ENST00000450056 3250 ntTSL 2 BASIC14.69□□□□□ -0.06
PHACTR1Q9C0D0 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
PHACTR1Q9C0D0 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
PHACTR1Q9C0D0 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
PHACTR1Q9C0D0 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
PHACTR1Q9C0D0 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC14.69□□□□□ -0.06
PHACTR1Q9C0D0 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
PHACTR1Q9C0D0 VPS52-212ENST00000445902 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
PHACTR1Q9C0D0 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
PHACTR1Q9C0D0 ATP6V0A4-202ENST00000353492 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
PHACTR1Q9C0D0 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
PHACTR1Q9C0D0 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
PHACTR1Q9C0D0 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
PHACTR1Q9C0D0 MAGI3-202ENST00000369611 3596 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
PHACTR1Q9C0D0 ZNF683-205ENST00000436292 1712 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
PHACTR1Q9C0D0 SPIN3-245ENST00000640768 1722 ntTSL 5 BASIC14.69□□□□□ -0.06
PHACTR1Q9C0D0 MAPK12-203ENST00000395780 1459 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
PHACTR1Q9C0D0 TMCC2-201ENST00000329800 2818 ntTSL 2 BASIC14.69□□□□□ -0.06
PHACTR1Q9C0D0 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC14.69□□□□□ -0.06
PHACTR1Q9C0D0 CLCNKA-202ENST00000375692 2581 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
PHACTR1Q9C0D0 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
PHACTR1Q9C0D0 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
PHACTR1Q9C0D0 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
PHACTR1Q9C0D0 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
PHACTR1Q9C0D0 TUBB4AP1-201ENST00000450755 1325 ntBASIC14.68□□□□□ -0.06
PHACTR1Q9C0D0 ATP2C2-AS1-201ENST00000565700 2998 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
PHACTR1Q9C0D0 CENPBD1-201ENST00000314994 2744 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
PHACTR1Q9C0D0 REXO1L6P-201ENST00000603433 1515 ntBASIC14.68□□□□□ -0.06
PHACTR1Q9C0D0 PPP2R1B-204ENST00000426998 1888 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
PHACTR1Q9C0D0 FAM109A-201ENST00000361483 3256 ntAPPRIS ALT2 TSL 3 BASIC14.68□□□□□ -0.06
PHACTR1Q9C0D0 DCD-201ENST00000293371 645 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
PHACTR1Q9C0D0 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
PHACTR1Q9C0D0 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PHACTR1Q9C0D0 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
PHACTR1Q9C0D0 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
PHACTR1Q9C0D0 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
PHACTR1Q9C0D0 AL136309.1-201ENST00000403917 691 ntBASIC14.68□□□□□ -0.06
PHACTR1Q9C0D0 INE1-201ENST00000456273 945 ntBASIC14.68□□□□□ -0.06
PHACTR1Q9C0D0 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC14.68□□□□□ -0.06
PHACTR1Q9C0D0 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC14.68□□□□□ -0.06
PHACTR1Q9C0D0 AC084866.2-201ENST00000509956 449 ntTSL 2 BASIC14.68□□□□□ -0.06
PHACTR1Q9C0D0 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
PHACTR1Q9C0D0 AC022182.2-201ENST00000525556 859 ntTSL 2 BASIC14.68□□□□□ -0.06
PHACTR1Q9C0D0 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC14.68□□□□□ -0.06
PHACTR1Q9C0D0 MIR4745-201ENST00000577608 62 ntBASIC14.68□□□□□ -0.06
PHACTR1Q9C0D0 GNRHR2-203ENST00000581100 1187 ntBASIC14.68□□□□□ -0.06
PHACTR1Q9C0D0 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC14.68□□□□□ -0.06
PHACTR1Q9C0D0 ANKRD20A19P-202ENST00000442969 2796 ntTSL 2 BASIC14.68□□□□□ -0.06
PHACTR1Q9C0D0 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
PHACTR1Q9C0D0 LAMP2-203ENST00000434600 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
PHACTR1Q9C0D0 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PHACTR1Q9C0D0 LIMK1-208ENST00000538333 2170 ntTSL 2 BASIC14.68□□□□□ -0.06
PHACTR1Q9C0D0 INVS-201ENST00000262456 2968 ntTSL 5 BASIC14.68□□□□□ -0.06
PHACTR1Q9C0D0 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC14.68□□□□□ -0.06
PHACTR1Q9C0D0 F2-205ENST00000530231 1849 ntTSL 5 BASIC14.68□□□□□ -0.06
PHACTR1Q9C0D0 RIN3-201ENST00000216487 3859 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
PHACTR1Q9C0D0 PPP4R3B-205ENST00000616288 4310 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms