Protein–RNA interactions for Protein: Q96ST3

SIN3A, Paired amphipathic helix protein Sin3a, humanhuman

Predictions only

Length 1,273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3AQ96ST3 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
SIN3AQ96ST3 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
SIN3AQ96ST3 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC20.77■□□□□ 0.92
SIN3AQ96ST3 AC073869.1-201ENST00000415574 2762 ntBASIC20.77■□□□□ 0.92
SIN3AQ96ST3 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC20.77■□□□□ 0.92
SIN3AQ96ST3 MOGAT2-201ENST00000198801 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
SIN3AQ96ST3 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.91
SIN3AQ96ST3 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
SIN3AQ96ST3 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.91
SIN3AQ96ST3 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC20.77■□□□□ 0.91
SIN3AQ96ST3 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SIN3AQ96ST3 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SIN3AQ96ST3 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC20.76■□□□□ 0.91
SIN3AQ96ST3 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SIN3AQ96ST3 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC20.76■□□□□ 0.91
SIN3AQ96ST3 NR4A1-202ENST00000360284 2589 ntTSL 2 BASIC20.76■□□□□ 0.91
SIN3AQ96ST3 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
SIN3AQ96ST3 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SIN3AQ96ST3 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SIN3AQ96ST3 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC20.76■□□□□ 0.91
SIN3AQ96ST3 SF3B1-204ENST00000414963 651 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SIN3AQ96ST3 AC060234.1-201ENST00000422966 474 ntTSL 3 BASIC20.76■□□□□ 0.91
SIN3AQ96ST3 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC20.76■□□□□ 0.91
SIN3AQ96ST3 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC20.76■□□□□ 0.91
SIN3AQ96ST3 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC20.76■□□□□ 0.91
SIN3AQ96ST3 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC20.76■□□□□ 0.91
SIN3AQ96ST3 REC114-202ENST00000560581 833 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
SIN3AQ96ST3 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC20.76■□□□□ 0.91
SIN3AQ96ST3 AL109837.1-201ENST00000603272 613 ntBASIC20.76■□□□□ 0.91
SIN3AQ96ST3 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC20.76■□□□□ 0.91
SIN3AQ96ST3 INTS14-201ENST00000313182 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SIN3AQ96ST3 FAM96A-203ENST00000557835 1536 ntTSL 2 BASIC20.76■□□□□ 0.91
SIN3AQ96ST3 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SIN3AQ96ST3 AC046130.1-201ENST00000501954 2179 ntTSL 5 BASIC20.76■□□□□ 0.91
SIN3AQ96ST3 CCDC187-203ENST00000569961 3158 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
SIN3AQ96ST3 ADAM33-207ENST00000619289 3195 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SIN3AQ96ST3 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SIN3AQ96ST3 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
SIN3AQ96ST3 CYB5D2-203ENST00000575251 1588 ntTSL 2 BASIC20.76■□□□□ 0.91
SIN3AQ96ST3 AC005014.1-201ENST00000432006 2976 ntBASIC20.76■□□□□ 0.91
SIN3AQ96ST3 ATP6V0A4-202ENST00000353492 2709 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SIN3AQ96ST3 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SIN3AQ96ST3 GOLGA8EP-201ENST00000530246 1959 ntBASIC20.76■□□□□ 0.91
SIN3AQ96ST3 GRK6P1-201ENST00000400595 1711 ntBASIC20.75■□□□□ 0.91
SIN3AQ96ST3 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SIN3AQ96ST3 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
SIN3AQ96ST3 ORC6-201ENST00000219097 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SIN3AQ96ST3 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC20.75■□□□□ 0.91
SIN3AQ96ST3 HMGCS2-201ENST00000369406 2428 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SIN3AQ96ST3 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SIN3AQ96ST3 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
SIN3AQ96ST3 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC20.75■□□□□ 0.91
SIN3AQ96ST3 USP39-207ENST00000450066 2086 ntTSL 2 BASIC20.75■□□□□ 0.91
SIN3AQ96ST3 CRYBA4-201ENST00000354760 811 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SIN3AQ96ST3 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC20.75■□□□□ 0.91
SIN3AQ96ST3 OR2K2-202ENST00000374428 1038 ntBASIC20.75■□□□□ 0.91
SIN3AQ96ST3 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
SIN3AQ96ST3 IGHV4-39-201ENST00000390619 425 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
SIN3AQ96ST3 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC20.75■□□□□ 0.91
SIN3AQ96ST3 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC20.75■□□□□ 0.91
SIN3AQ96ST3 AC116345.2-201ENST00000512837 523 ntBASIC20.75■□□□□ 0.91
SIN3AQ96ST3 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC20.75■□□□□ 0.91
SIN3AQ96ST3 MIR3619-201ENST00000579667 83 ntBASIC20.75■□□□□ 0.91
SIN3AQ96ST3 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC20.75■□□□□ 0.91
SIN3AQ96ST3 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC20.75■□□□□ 0.91
SIN3AQ96ST3 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC20.75■□□□□ 0.91
SIN3AQ96ST3 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC20.75■□□□□ 0.91
SIN3AQ96ST3 TMBIM6-217ENST00000549385 2771 ntAPPRIS P3 TSL 5 BASIC20.75■□□□□ 0.91
SIN3AQ96ST3 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SIN3AQ96ST3 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SIN3AQ96ST3 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC20.75■□□□□ 0.91
SIN3AQ96ST3 PRAME-205ENST00000405655 2179 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
SIN3AQ96ST3 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
SIN3AQ96ST3 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC20.74■□□□□ 0.91
SIN3AQ96ST3 SERPINF1-201ENST00000254722 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SIN3AQ96ST3 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC20.74■□□□□ 0.91
SIN3AQ96ST3 LGALS12-204ENST00000415491 1816 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SIN3AQ96ST3 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SIN3AQ96ST3 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
SIN3AQ96ST3 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
SIN3AQ96ST3 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SIN3AQ96ST3 C6orf136-202ENST00000376471 614 ntTSL 3 BASIC20.74■□□□□ 0.91
SIN3AQ96ST3 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC20.74■□□□□ 0.91
SIN3AQ96ST3 DUX4L50-201ENST00000455245 715 ntBASIC20.74■□□□□ 0.91
SIN3AQ96ST3 NUP210P1-202ENST00000504322 710 ntBASIC20.74■□□□□ 0.91
SIN3AQ96ST3 SNHG21-204ENST00000559366 674 ntTSL 2 BASIC20.74■□□□□ 0.91
SIN3AQ96ST3 AC023794.5-201ENST00000564380 2157 ntBASIC20.74■□□□□ 0.91
SIN3AQ96ST3 AL021578.1-201ENST00000613646 709 ntBASIC20.74■□□□□ 0.91
SIN3AQ96ST3 SLC4A1-206ENST00000631130 1433 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SIN3AQ96ST3 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
SIN3AQ96ST3 PPM1M-203ENST00000409502 1790 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SIN3AQ96ST3 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC20.74■□□□□ 0.91
SIN3AQ96ST3 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC20.74■□□□□ 0.91
SIN3AQ96ST3 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
SIN3AQ96ST3 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
SIN3AQ96ST3 FRMPD2B-201ENST00000431305 1347 ntBASIC20.74■□□□□ 0.91
SIN3AQ96ST3 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC20.74■□□□□ 0.91
SIN3AQ96ST3 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC20.74■□□□□ 0.91
SIN3AQ96ST3 IL1RN-201ENST00000259206 1810 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SIN3AQ96ST3 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms