Protein–RNA interactions for Protein: Q96SN8

CDK5RAP2, CDK5 regulatory subunit-associated protein 2, humanhuman

Predictions only

Length 1,893 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2Q96SN8 AL359219.1-201ENST00000556311 934 ntBASIC16.52■□□□□ 0.23
CDK5RAP2Q96SN8 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC16.52■□□□□ 0.23
CDK5RAP2Q96SN8 RN7SL725P-201ENST00000606439 259 ntBASIC16.52■□□□□ 0.23
CDK5RAP2Q96SN8 AL356417.2-202ENST00000608986 532 ntTSL 3 BASIC16.52■□□□□ 0.23
CDK5RAP2Q96SN8 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC16.52■□□□□ 0.23
CDK5RAP2Q96SN8 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
CDK5RAP2Q96SN8 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
CDK5RAP2Q96SN8 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC16.52■□□□□ 0.23
CDK5RAP2Q96SN8 OXSM-201ENST00000280701 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CDK5RAP2Q96SN8 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CDK5RAP2Q96SN8 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
CDK5RAP2Q96SN8 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CDK5RAP2Q96SN8 AC139795.2-201ENST00000499900 1751 ntTSL 2 BASIC16.51■□□□□ 0.23
CDK5RAP2Q96SN8 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CDK5RAP2Q96SN8 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
CDK5RAP2Q96SN8 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
CDK5RAP2Q96SN8 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CDK5RAP2Q96SN8 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CDK5RAP2Q96SN8 LILRB3-201ENST00000245620 2066 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CDK5RAP2Q96SN8 AC092115.1-201ENST00000566277 1402 ntBASIC16.51■□□□□ 0.23
CDK5RAP2Q96SN8 AL928654.5-201ENST00000624831 2501 ntBASIC16.51■□□□□ 0.23
CDK5RAP2Q96SN8 DSTN-203ENST00000474024 1853 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CDK5RAP2Q96SN8 AC093462.1-201ENST00000621167 1683 ntBASIC16.51■□□□□ 0.23
CDK5RAP2Q96SN8 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC16.51■□□□□ 0.23
CDK5RAP2Q96SN8 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CDK5RAP2Q96SN8 AC023908.3-201ENST00000564211 3047 ntBASIC16.51■□□□□ 0.23
CDK5RAP2Q96SN8 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC16.51■□□□□ 0.23
CDK5RAP2Q96SN8 HPGD-201ENST00000296521 1171 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CDK5RAP2Q96SN8 NSMCE1-201ENST00000361439 1067 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CDK5RAP2Q96SN8 RPRD2-201ENST00000369067 1043 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
CDK5RAP2Q96SN8 PIFO-201ENST00000369737 746 ntTSL 2 BASIC16.51■□□□□ 0.23
CDK5RAP2Q96SN8 SNORA50C-201ENST00000408535 133 ntBASIC16.51■□□□□ 0.23
CDK5RAP2Q96SN8 ACTBP14-201ENST00000411655 1089 ntBASIC16.51■□□□□ 0.23
CDK5RAP2Q96SN8 SLC12A9-AS1-201ENST00000412754 369 ntTSL 3 BASIC16.51■□□□□ 0.23
CDK5RAP2Q96SN8 RPL9-203ENST00000449470 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CDK5RAP2Q96SN8 GULOP-201ENST00000454030 748 ntBASIC16.51■□□□□ 0.23
CDK5RAP2Q96SN8 EEF1GP8-201ENST00000506566 1154 ntBASIC16.51■□□□□ 0.23
CDK5RAP2Q96SN8 C10orf113-201ENST00000529198 614 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CDK5RAP2Q96SN8 AC141586.1-203ENST00000567242 366 ntBASIC16.51■□□□□ 0.23
CDK5RAP2Q96SN8 AC012073.1-201ENST00000606114 1108 ntBASIC16.51■□□□□ 0.23
CDK5RAP2Q96SN8 Metazoa_SRP.144-201ENST00000617007 311 ntBASIC16.51■□□□□ 0.23
CDK5RAP2Q96SN8 ADAMTSL4-AS1-203ENST00000617352 1036 ntTSL 5 BASIC16.51■□□□□ 0.23
CDK5RAP2Q96SN8 SNORA50.1-201ENST00000628590 135 ntBASIC16.51■□□□□ 0.23
CDK5RAP2Q96SN8 YWHAQ-201ENST00000238081 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CDK5RAP2Q96SN8 PPP1R32-201ENST00000338608 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CDK5RAP2Q96SN8 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CDK5RAP2Q96SN8 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CDK5RAP2Q96SN8 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
CDK5RAP2Q96SN8 AL109809.1-201ENST00000418979 1367 ntBASIC16.51■□□□□ 0.23
CDK5RAP2Q96SN8 RFX8-201ENST00000428343 1686 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
CDK5RAP2Q96SN8 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
CDK5RAP2Q96SN8 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
CDK5RAP2Q96SN8 HFE-203ENST00000336625 804 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CDK5RAP2Q96SN8 U3.5-201ENST00000363448 216 ntBASIC16.5■□□□□ 0.23
CDK5RAP2Q96SN8 AC097059.1-201ENST00000413103 885 ntTSL 5 BASIC16.5■□□□□ 0.23
CDK5RAP2Q96SN8 CCL24-202ENST00000416943 585 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CDK5RAP2Q96SN8 AC111149.2-202ENST00000518355 599 ntTSL 4 BASIC16.5■□□□□ 0.23
CDK5RAP2Q96SN8 AC090004.1-201ENST00000608606 653 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
CDK5RAP2Q96SN8 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CDK5RAP2Q96SN8 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
CDK5RAP2Q96SN8 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
CDK5RAP2Q96SN8 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CDK5RAP2Q96SN8 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CDK5RAP2Q96SN8 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
CDK5RAP2Q96SN8 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CDK5RAP2Q96SN8 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC16.5■□□□□ 0.23
CDK5RAP2Q96SN8 IFT22-210ENST00000517481 1657 ntTSL 2 BASIC16.5■□□□□ 0.23
CDK5RAP2Q96SN8 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CDK5RAP2Q96SN8 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CDK5RAP2Q96SN8 RCC2P5-201ENST00000492126 1487 ntBASIC16.5■□□□□ 0.23
CDK5RAP2Q96SN8 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CDK5RAP2Q96SN8 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CDK5RAP2Q96SN8 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC16.5■□□□□ 0.23
CDK5RAP2Q96SN8 AL672207.1-201ENST00000328462 1570 ntBASIC16.5■□□□□ 0.23
CDK5RAP2Q96SN8 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CDK5RAP2Q96SN8 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC16.5■□□□□ 0.23
CDK5RAP2Q96SN8 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CDK5RAP2Q96SN8 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CDK5RAP2Q96SN8 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CDK5RAP2Q96SN8 GDPGP1-201ENST00000329600 1193 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
CDK5RAP2Q96SN8 MAL-204ENST00000354078 831 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CDK5RAP2Q96SN8 PDLIM5-203ENST00000359265 1189 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CDK5RAP2Q96SN8 S100A3-202ENST00000368713 856 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CDK5RAP2Q96SN8 MIR1307-201ENST00000408840 149 ntBASIC16.5■□□□□ 0.23
CDK5RAP2Q96SN8 TPRKB-203ENST00000409716 816 ntTSL 5 BASIC16.5■□□□□ 0.23
CDK5RAP2Q96SN8 LAMTOR4-209ENST00000488241 613 ntTSL 2 BASIC16.5■□□□□ 0.23
CDK5RAP2Q96SN8 MIR4326-201ENST00000582203 59 ntBASIC16.5■□□□□ 0.23
CDK5RAP2Q96SN8 AP005264.6-204ENST00000588436 719 ntBASIC16.5■□□□□ 0.23
CDK5RAP2Q96SN8 AC011247.3-201ENST00000603297 438 ntBASIC16.5■□□□□ 0.23
CDK5RAP2Q96SN8 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
CDK5RAP2Q96SN8 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
CDK5RAP2Q96SN8 CDH16-201ENST00000299752 2954 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CDK5RAP2Q96SN8 MAGEH1-201ENST00000342972 1462 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
CDK5RAP2Q96SN8 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CDK5RAP2Q96SN8 ZSCAN2-202ENST00000327179 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CDK5RAP2Q96SN8 BTNL8-203ENST00000400707 1512 ntTSL 2 BASIC16.49■□□□□ 0.23
CDK5RAP2Q96SN8 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
CDK5RAP2Q96SN8 LINC02021-201ENST00000504808 1608 ntTSL 3 BASIC16.49■□□□□ 0.23
CDK5RAP2Q96SN8 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CDK5RAP2Q96SN8 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC16.49■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms