Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
RPRD1AQ96P16 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
RPRD1AQ96P16 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RPRD1AQ96P16 AC023908.3-201ENST00000564211 3047 ntBASIC14.87□□□□□ -0.03
RPRD1AQ96P16 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RPRD1AQ96P16 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
RPRD1AQ96P16 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC14.87□□□□□ -0.03
RPRD1AQ96P16 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC14.87□□□□□ -0.03
RPRD1AQ96P16 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC14.87□□□□□ -0.03
RPRD1AQ96P16 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
RPRD1AQ96P16 AL596276.2-201ENST00000447525 331 ntBASIC14.87□□□□□ -0.03
RPRD1AQ96P16 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC14.87□□□□□ -0.03
RPRD1AQ96P16 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC14.87□□□□□ -0.03
RPRD1AQ96P16 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC14.87□□□□□ -0.03
RPRD1AQ96P16 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC14.87□□□□□ -0.03
RPRD1AQ96P16 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC14.87□□□□□ -0.03
RPRD1AQ96P16 AC140658.4-201ENST00000561990 352 ntBASIC14.87□□□□□ -0.03
RPRD1AQ96P16 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC14.87□□□□□ -0.03
RPRD1AQ96P16 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC14.87□□□□□ -0.03
RPRD1AQ96P16 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC14.87□□□□□ -0.03
RPRD1AQ96P16 AP001505.2-201ENST00000616815 443 ntBASIC14.87□□□□□ -0.03
RPRD1AQ96P16 PARVB-201ENST00000338758 5429 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RPRD1AQ96P16 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RPRD1AQ96P16 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RPRD1AQ96P16 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
RPRD1AQ96P16 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
RPRD1AQ96P16 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC14.87□□□□□ -0.03
RPRD1AQ96P16 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RPRD1AQ96P16 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC14.87□□□□□ -0.03
RPRD1AQ96P16 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
RPRD1AQ96P16 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RPRD1AQ96P16 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC14.87□□□□□ -0.03
RPRD1AQ96P16 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RPRD1AQ96P16 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
RPRD1AQ96P16 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RPRD1AQ96P16 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC14.87□□□□□ -0.03
RPRD1AQ96P16 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
RPRD1AQ96P16 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
RPRD1AQ96P16 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
RPRD1AQ96P16 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC14.87□□□□□ -0.03
RPRD1AQ96P16 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC14.87□□□□□ -0.03
RPRD1AQ96P16 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
RPRD1AQ96P16 AC008132.1-202ENST00000342005 1389 ntBASIC14.86□□□□□ -0.03
RPRD1AQ96P16 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RPRD1AQ96P16 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC14.86□□□□□ -0.03
RPRD1AQ96P16 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RPRD1AQ96P16 AP002353.1-201ENST00000528257 1599 ntBASIC14.86□□□□□ -0.03
RPRD1AQ96P16 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
RPRD1AQ96P16 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
RPRD1AQ96P16 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RPRD1AQ96P16 AC092053.3-201ENST00000641308 4975 ntBASIC14.86□□□□□ -0.03
RPRD1AQ96P16 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
RPRD1AQ96P16 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RPRD1AQ96P16 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC14.86□□□□□ -0.03
RPRD1AQ96P16 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RPRD1AQ96P16 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC14.86□□□□□ -0.03
RPRD1AQ96P16 AC239868.1-201ENST00000369385 493 ntBASIC14.86□□□□□ -0.03
RPRD1AQ96P16 CMC1-204ENST00000423894 549 ntTSL 2 BASIC14.86□□□□□ -0.03
RPRD1AQ96P16 ISCA2P1-201ENST00000425548 448 ntBASIC14.86□□□□□ -0.03
RPRD1AQ96P16 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC14.86□□□□□ -0.03
RPRD1AQ96P16 IGHJ2P-201ENST00000454480 60 ntBASIC14.86□□□□□ -0.03
RPRD1AQ96P16 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
RPRD1AQ96P16 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RPRD1AQ96P16 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC14.86□□□□□ -0.03
RPRD1AQ96P16 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC14.86□□□□□ -0.03
RPRD1AQ96P16 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC14.86□□□□□ -0.03
RPRD1AQ96P16 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC14.86□□□□□ -0.03
RPRD1AQ96P16 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC14.86□□□□□ -0.03
RPRD1AQ96P16 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC14.86□□□□□ -0.03
RPRD1AQ96P16 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC14.86□□□□□ -0.03
RPRD1AQ96P16 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC14.86□□□□□ -0.03
RPRD1AQ96P16 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC14.86□□□□□ -0.03
RPRD1AQ96P16 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC14.86□□□□□ -0.03
RPRD1AQ96P16 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
RPRD1AQ96P16 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RPRD1AQ96P16 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC14.86□□□□□ -0.03
RPRD1AQ96P16 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC14.86□□□□□ -0.03
RPRD1AQ96P16 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
RPRD1AQ96P16 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC14.86□□□□□ -0.03
RPRD1AQ96P16 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC14.86□□□□□ -0.03
RPRD1AQ96P16 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC14.86□□□□□ -0.03
RPRD1AQ96P16 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
RPRD1AQ96P16 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC14.86□□□□□ -0.03
RPRD1AQ96P16 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
RPRD1AQ96P16 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC14.86□□□□□ -0.03
RPRD1AQ96P16 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC14.85□□□□□ -0.03
RPRD1AQ96P16 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RPRD1AQ96P16 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC14.85□□□□□ -0.03
RPRD1AQ96P16 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC14.85□□□□□ -0.03
RPRD1AQ96P16 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
RPRD1AQ96P16 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RPRD1AQ96P16 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC14.85□□□□□ -0.03
RPRD1AQ96P16 FAM45BP-202ENST00000592932 1624 ntBASIC14.85□□□□□ -0.03
RPRD1AQ96P16 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC14.85□□□□□ -0.03
RPRD1AQ96P16 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC14.85□□□□□ -0.03
RPRD1AQ96P16 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
RPRD1AQ96P16 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RPRD1AQ96P16 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RPRD1AQ96P16 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RPRD1AQ96P16 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms