Protein–RNA interactions for Protein: Q92574

TSC1, Hamartin, humanhuman

Predictions only

Length 1,164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSC1Q92574 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
TSC1Q92574 CT62-203ENST00000566432 2822 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
TSC1Q92574 CLK3P2-201ENST00000427566 1453 ntBASIC16.03■□□□□ 0.16
TSC1Q92574 ROPN1B-202ENST00000504401 2050 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TSC1Q92574 TBC1D3E-201ENST00000621587 2076 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TSC1Q92574 COL2A1-201ENST00000337299 4257 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
TSC1Q92574 C1orf109-201ENST00000358011 2355 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
TSC1Q92574 FAM224A-201ENST00000419557 2031 ntTSL 2 BASIC16.02■□□□□ 0.16
TSC1Q92574 SVIL-AS1-204ENST00000427063 2025 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
TSC1Q92574 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC16.02■□□□□ 0.16
TSC1Q92574 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
TSC1Q92574 LOXL4-201ENST00000260702 3653 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TSC1Q92574 MUC20-203ENST00000436408 2463 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
TSC1Q92574 ZSCAN16-AS1-201ENST00000600652 2163 ntTSL 2 BASIC16.02■□□□□ 0.16
TSC1Q92574 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC16.02■□□□□ 0.16
TSC1Q92574 ANKRD36BP2-202ENST00000421951 1899 ntTSL 3 BASIC16.02■□□□□ 0.16
TSC1Q92574 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC16.02■□□□□ 0.16
TSC1Q92574 CPN2-201ENST00000323830 3028 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TSC1Q92574 CST3-203ENST00000398411 3286 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TSC1Q92574 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TSC1Q92574 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
TSC1Q92574 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
TSC1Q92574 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
TSC1Q92574 ARSEP1-201ENST00000420443 635 ntBASIC16.02■□□□□ 0.16
TSC1Q92574 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.16
TSC1Q92574 HLA-V-201ENST00000429037 534 ntBASIC16.02■□□□□ 0.16
TSC1Q92574 U91328.1-201ENST00000437528 223 ntBASIC16.02■□□□□ 0.16
TSC1Q92574 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC16.02■□□□□ 0.16
TSC1Q92574 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC16.02■□□□□ 0.16
TSC1Q92574 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
TSC1Q92574 GAPDHP40-201ENST00000505218 1006 ntBASIC16.02■□□□□ 0.16
TSC1Q92574 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC16.02■□□□□ 0.16
TSC1Q92574 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
TSC1Q92574 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC16.02■□□□□ 0.16
TSC1Q92574 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC16.02■□□□□ 0.16
TSC1Q92574 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC16.02■□□□□ 0.16
TSC1Q92574 GPX4-206ENST00000588919 803 ntTSL 2 BASIC16.02■□□□□ 0.16
TSC1Q92574 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC16.02■□□□□ 0.16
TSC1Q92574 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC16.02■□□□□ 0.16
TSC1Q92574 GPR39-203ENST00000622084 900 ntTSL 5 BASIC16.02■□□□□ 0.16
TSC1Q92574 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
TSC1Q92574 URGCP-207ENST00000453200 4042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
TSC1Q92574 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
TSC1Q92574 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
TSC1Q92574 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
TSC1Q92574 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
TSC1Q92574 RPP30-202ENST00000371703 2589 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
TSC1Q92574 AC011498.7-201ENST00000624986 2027 ntBASIC16.02■□□□□ 0.15
TSC1Q92574 TTC39B-201ENST00000297615 3053 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.15
TSC1Q92574 TRPV1-209ENST00000576351 2525 ntTSL 5 BASIC16.02■□□□□ 0.15
TSC1Q92574 ZSWIM3-201ENST00000255152 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
TSC1Q92574 YWHAQ-201ENST00000238081 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
TSC1Q92574 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC16.02■□□□□ 0.15
TSC1Q92574 GDPD5-209ENST00000529721 3222 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
TSC1Q92574 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC16.02■□□□□ 0.15
TSC1Q92574 ELK1-201ENST00000247161 2695 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
TSC1Q92574 AC012531.1-201ENST00000562848 2680 ntBASIC16.02■□□□□ 0.15
TSC1Q92574 TBC1D2-204ENST00000375066 3198 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TSC1Q92574 LIPE-201ENST00000244289 3813 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TSC1Q92574 TKT-203ENST00000423525 2831 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TSC1Q92574 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TSC1Q92574 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TSC1Q92574 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TSC1Q92574 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
TSC1Q92574 TVP23A-201ENST00000299866 3360 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
TSC1Q92574 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
TSC1Q92574 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TSC1Q92574 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TSC1Q92574 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
TSC1Q92574 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC16.01■□□□□ 0.15
TSC1Q92574 AC010740.1-201ENST00000417035 684 ntBASIC16.01■□□□□ 0.15
TSC1Q92574 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TSC1Q92574 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC16.01■□□□□ 0.15
TSC1Q92574 HNRNPA1P23-201ENST00000491091 1133 ntBASIC16.01■□□□□ 0.15
TSC1Q92574 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC16.01■□□□□ 0.15
TSC1Q92574 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC16.01■□□□□ 0.15
TSC1Q92574 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TSC1Q92574 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC16.01■□□□□ 0.15
TSC1Q92574 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC16.01■□□□□ 0.15
TSC1Q92574 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TSC1Q92574 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TSC1Q92574 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
TSC1Q92574 AC135782.3-201ENST00000562782 2105 ntBASIC16.01■□□□□ 0.15
TSC1Q92574 MTMR11-201ENST00000369140 2324 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
TSC1Q92574 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
TSC1Q92574 MEG3-213ENST00000455531 4867 ntTSL 2 BASIC16.01■□□□□ 0.15
TSC1Q92574 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TSC1Q92574 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC16■□□□□ 0.15
TSC1Q92574 UBE2I-202ENST00000355803 3253 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
TSC1Q92574 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TSC1Q92574 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC16■□□□□ 0.15
TSC1Q92574 GPR107-208ENST00000610997 2813 ntTSL 5 BASIC16■□□□□ 0.15
TSC1Q92574 CNTD1-204ENST00000588408 2369 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TSC1Q92574 GRM2-202ENST00000395052 3151 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
TSC1Q92574 TAX1BP1-207ENST00000433216 3174 ntTSL 2 BASIC16■□□□□ 0.15
TSC1Q92574 GMCL1-201ENST00000282570 4191 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TSC1Q92574 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TSC1Q92574 BDH1-201ENST00000358186 3330 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
TSC1Q92574 PERM1-202ENST00000433179 3340 ntAPPRIS P2 TSL 5 BASIC16■□□□□ 0.15
TSC1Q92574 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC16■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 66.8 ms