Protein–RNA interactions for Protein: Q8WV60

PTCD2, Pentatricopeptide repeat-containing protein 2, mitochondrial, humanhuman

Known RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2Q8WV60 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PTCD2Q8WV60 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
PTCD2Q8WV60 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
PTCD2Q8WV60 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC14.81□□□□□ -0.04
PTCD2Q8WV60 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC14.81□□□□□ -0.04
PTCD2Q8WV60 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
PTCD2Q8WV60 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PTCD2Q8WV60 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PTCD2Q8WV60 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
PTCD2Q8WV60 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
PTCD2Q8WV60 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
PTCD2Q8WV60 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PTCD2Q8WV60 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
PTCD2Q8WV60 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC14.81□□□□□ -0.04
PTCD2Q8WV60 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PTCD2Q8WV60 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC14.81□□□□□ -0.04
PTCD2Q8WV60 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PTCD2Q8WV60 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
PTCD2Q8WV60 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC14.81□□□□□ -0.04
PTCD2Q8WV60 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PTCD2Q8WV60 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
PTCD2Q8WV60 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC14.81□□□□□ -0.04
PTCD2Q8WV60 RLN2-201ENST00000381627 1177 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PTCD2Q8WV60 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC14.81□□□□□ -0.04
PTCD2Q8WV60 PTPA-215ENST00000432124 567 ntTSL 4 BASIC14.81□□□□□ -0.04
PTCD2Q8WV60 AC005324.2-201ENST00000433051 415 ntTSL 5 BASIC14.81□□□□□ -0.04
PTCD2Q8WV60 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC14.81□□□□□ -0.04
PTCD2Q8WV60 AL035414.1-201ENST00000451327 857 ntBASIC14.81□□□□□ -0.04
PTCD2Q8WV60 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
PTCD2Q8WV60 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PTCD2Q8WV60 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC14.81□□□□□ -0.04
PTCD2Q8WV60 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC14.81□□□□□ -0.04
PTCD2Q8WV60 AC090568.1-201ENST00000509499 856 ntBASIC14.81□□□□□ -0.04
PTCD2Q8WV60 RN7SKP157-201ENST00000516174 282 ntBASIC14.81□□□□□ -0.04
PTCD2Q8WV60 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC14.81□□□□□ -0.04
PTCD2Q8WV60 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC14.81□□□□□ -0.04
PTCD2Q8WV60 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC14.81□□□□□ -0.04
PTCD2Q8WV60 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC14.81□□□□□ -0.04
PTCD2Q8WV60 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC14.81□□□□□ -0.04
PTCD2Q8WV60 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC14.81□□□□□ -0.04
PTCD2Q8WV60 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC14.81□□□□□ -0.04
PTCD2Q8WV60 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC14.81□□□□□ -0.04
PTCD2Q8WV60 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC14.81□□□□□ -0.04
PTCD2Q8WV60 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC14.81□□□□□ -0.04
PTCD2Q8WV60 AC007423.1-201ENST00000605009 627 ntBASIC14.81□□□□□ -0.04
PTCD2Q8WV60 AC091271.1-201ENST00000611877 1162 ntBASIC14.81□□□□□ -0.04
PTCD2Q8WV60 AC005695.3-201ENST00000614522 232 ntBASIC14.81□□□□□ -0.04
PTCD2Q8WV60 PRKN-211ENST00000615065 261 ntTSL 5 BASIC14.81□□□□□ -0.04
PTCD2Q8WV60 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
PTCD2Q8WV60 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
PTCD2Q8WV60 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PTCD2Q8WV60 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC14.81□□□□□ -0.04
PTCD2Q8WV60 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PTCD2Q8WV60 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
PTCD2Q8WV60 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC14.81□□□□□ -0.04
PTCD2Q8WV60 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
PTCD2Q8WV60 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PTCD2Q8WV60 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
PTCD2Q8WV60 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC14.81□□□□□ -0.04
PTCD2Q8WV60 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
PTCD2Q8WV60 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC14.81□□□□□ -0.04
PTCD2Q8WV60 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
PTCD2Q8WV60 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
PTCD2Q8WV60 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC14.81□□□□□ -0.04
PTCD2Q8WV60 AC009093.10-201ENST00000641956 1442 ntBASIC14.81□□□□□ -0.04
PTCD2Q8WV60 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC14.81□□□□□ -0.04
PTCD2Q8WV60 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC14.81□□□□□ -0.04
PTCD2Q8WV60 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC14.81□□□□□ -0.04
PTCD2Q8WV60 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PTCD2Q8WV60 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC14.81□□□□□ -0.04
PTCD2Q8WV60 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
PTCD2Q8WV60 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC14.81□□□□□ -0.04
PTCD2Q8WV60 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
PTCD2Q8WV60 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
PTCD2Q8WV60 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
PTCD2Q8WV60 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
PTCD2Q8WV60 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC14.81□□□□□ -0.04
PTCD2Q8WV60 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PTCD2Q8WV60 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC14.81□□□□□ -0.04
PTCD2Q8WV60 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PTCD2Q8WV60 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
PTCD2Q8WV60 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
PTCD2Q8WV60 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC14.81□□□□□ -0.04
PTCD2Q8WV60 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
PTCD2Q8WV60 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
PTCD2Q8WV60 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC14.8□□□□□ -0.04
PTCD2Q8WV60 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
PTCD2Q8WV60 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
PTCD2Q8WV60 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC14.8□□□□□ -0.04
PTCD2Q8WV60 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC14.8□□□□□ -0.04
PTCD2Q8WV60 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC14.8□□□□□ -0.04
PTCD2Q8WV60 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC14.8□□□□□ -0.04
PTCD2Q8WV60 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
PTCD2Q8WV60 LINC01230-201ENST00000625222 3017 ntBASIC14.8□□□□□ -0.04
PTCD2Q8WV60 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
PTCD2Q8WV60 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PTCD2Q8WV60 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
PTCD2Q8WV60 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PTCD2Q8WV60 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PTCD2Q8WV60 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms