Protein–RNA interactions for Protein: Q8TDI0

CHD5, Chromodomain-helicase-DNA-binding protein 5, humanhuman

Predictions only

Length 1,954 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD5Q8TDI0 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CHD5Q8TDI0 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
CHD5Q8TDI0 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CHD5Q8TDI0 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
CHD5Q8TDI0 ARMCX3-203ENST00000471229 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CHD5Q8TDI0 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CHD5Q8TDI0 CATSPERE-202ENST00000366533 3019 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
CHD5Q8TDI0 LAIR1-201ENST00000348231 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CHD5Q8TDI0 PLEKHG6-201ENST00000011684 2881 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CHD5Q8TDI0 AC245100.1-201ENST00000452996 1331 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CHD5Q8TDI0 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
CHD5Q8TDI0 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
CHD5Q8TDI0 PSMG2-201ENST00000317615 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CHD5Q8TDI0 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CHD5Q8TDI0 GPNMB-203ENST00000409458 1673 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CHD5Q8TDI0 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
CHD5Q8TDI0 HLA-DQB1-202ENST00000399079 1501 ntBASIC14.37□□□□□ -0.11
CHD5Q8TDI0 TMPO-202ENST00000266732 3615 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CHD5Q8TDI0 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CHD5Q8TDI0 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CHD5Q8TDI0 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CHD5Q8TDI0 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CHD5Q8TDI0 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CHD5Q8TDI0 AC026316.1-201ENST00000398900 414 ntBASIC14.37□□□□□ -0.11
CHD5Q8TDI0 DCST1-AS1-201ENST00000452962 822 ntTSL 2 BASIC14.37□□□□□ -0.11
CHD5Q8TDI0 RMDN1-218ENST00000523911 950 ntTSL 2 BASIC14.37□□□□□ -0.11
CHD5Q8TDI0 AC084781.1-201ENST00000613737 656 ntBASIC14.37□□□□□ -0.11
CHD5Q8TDI0 Metazoa_SRP.65-201ENST00000615602 264 ntBASIC14.37□□□□□ -0.11
CHD5Q8TDI0 AC128714.1-201ENST00000637035 887 ntBASIC14.37□□□□□ -0.11
CHD5Q8TDI0 KRT33A-201ENST00000007735 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CHD5Q8TDI0 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CHD5Q8TDI0 AC111170.3-201ENST00000624282 2464 ntBASIC14.37□□□□□ -0.11
CHD5Q8TDI0 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC14.37□□□□□ -0.11
CHD5Q8TDI0 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CHD5Q8TDI0 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
CHD5Q8TDI0 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
CHD5Q8TDI0 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC14.37□□□□□ -0.11
CHD5Q8TDI0 AC109460.1-201ENST00000567209 1478 ntTSL 3 BASIC14.37□□□□□ -0.11
CHD5Q8TDI0 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
CHD5Q8TDI0 NOP58-201ENST00000264279 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CHD5Q8TDI0 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CHD5Q8TDI0 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CHD5Q8TDI0 AC015909.5-201ENST00000624336 2266 ntBASIC14.37□□□□□ -0.11
CHD5Q8TDI0 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CHD5Q8TDI0 BCL2L13-206ENST00000399782 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CHD5Q8TDI0 C7orf57-201ENST00000348904 2125 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
CHD5Q8TDI0 GOLGA8EP-201ENST00000530246 1959 ntBASIC14.37□□□□□ -0.11
CHD5Q8TDI0 CRYM-202ENST00000543948 1400 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
CHD5Q8TDI0 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CHD5Q8TDI0 RBM4B-206ENST00000531036 1646 ntTSL 2 BASIC14.37□□□□□ -0.11
CHD5Q8TDI0 KCNIP1-210ENST00000636734 1613 ntTSL 5 BASIC14.37□□□□□ -0.11
CHD5Q8TDI0 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
CHD5Q8TDI0 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC14.36□□□□□ -0.11
CHD5Q8TDI0 IL17B-201ENST00000261796 696 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CHD5Q8TDI0 TMEM208-201ENST00000304800 793 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CHD5Q8TDI0 NUDT2-201ENST00000346365 960 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CHD5Q8TDI0 NUDT2-202ENST00000379155 1002 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
CHD5Q8TDI0 LINC00466-203ENST00000436475 1059 ntTSL 5 BASIC14.36□□□□□ -0.11
CHD5Q8TDI0 CD81-209ENST00000492627 886 ntTSL 3 BASIC14.36□□□□□ -0.11
CHD5Q8TDI0 LINC01598-205ENST00000508763 719 ntTSL 5 BASIC14.36□□□□□ -0.11
CHD5Q8TDI0 NEU3-205ENST00000531619 582 ntTSL 5 BASIC14.36□□□□□ -0.11
CHD5Q8TDI0 NEU3-207ENST00000534628 746 ntTSL 2 BASIC14.36□□□□□ -0.11
CHD5Q8TDI0 FAM60A-207ENST00000542983 738 ntTSL 4 BASIC14.36□□□□□ -0.11
CHD5Q8TDI0 ALG10B-203ENST00000551464 571 ntTSL 3 BASIC14.36□□□□□ -0.11
CHD5Q8TDI0 TMEM205-210ENST00000588560 840 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
CHD5Q8TDI0 COX10-AS1-206ENST00000602743 576 ntTSL 5 BASIC14.36□□□□□ -0.11
CHD5Q8TDI0 NUDT2-204ENST00000618590 825 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
CHD5Q8TDI0 AC004554.1-201ENST00000422830 1468 ntBASIC14.36□□□□□ -0.11
CHD5Q8TDI0 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CHD5Q8TDI0 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC14.36□□□□□ -0.11
CHD5Q8TDI0 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CHD5Q8TDI0 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CHD5Q8TDI0 RELL1-201ENST00000314117 1326 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CHD5Q8TDI0 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
CHD5Q8TDI0 CFAP157-206ENST00000614677 1796 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
CHD5Q8TDI0 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CHD5Q8TDI0 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
CHD5Q8TDI0 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CHD5Q8TDI0 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CHD5Q8TDI0 API5-208ENST00000531273 1868 ntTSL 2 BASIC14.36□□□□□ -0.11
CHD5Q8TDI0 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC14.36□□□□□ -0.11
CHD5Q8TDI0 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
CHD5Q8TDI0 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CHD5Q8TDI0 CPA5-206ENST00000474905 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CHD5Q8TDI0 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC14.36□□□□□ -0.11
CHD5Q8TDI0 GSG1L-201ENST00000380897 1173 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CHD5Q8TDI0 AC145207.1-201ENST00000415556 691 ntTSL 4 BASIC14.36□□□□□ -0.11
CHD5Q8TDI0 AL391415.1-201ENST00000439844 400 ntTSL 3 BASIC14.36□□□□□ -0.11
CHD5Q8TDI0 RAMP3-202ENST00000481345 559 ntAPPRIS P2 TSL 4 BASIC14.36□□□□□ -0.11
CHD5Q8TDI0 RAMP3-203ENST00000496212 543 ntAPPRIS ALT2 TSL 4 BASIC14.36□□□□□ -0.11
CHD5Q8TDI0 APOC1P1-201ENST00000507983 630 ntTSL 4 BASIC14.36□□□□□ -0.11
CHD5Q8TDI0 ADM-203ENST00000525063 867 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
CHD5Q8TDI0 TMEM218-205ENST00000527271 706 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
CHD5Q8TDI0 SIRT3-210ENST00000529382 1225 ntTSL 2 BASIC14.36□□□□□ -0.11
CHD5Q8TDI0 AC111170.1-201ENST00000591110 1132 ntTSL 3 BASIC14.36□□□□□ -0.11
CHD5Q8TDI0 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CHD5Q8TDI0 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
CHD5Q8TDI0 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CHD5Q8TDI0 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CHD5Q8TDI0 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC14.36□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms