Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 AL023775.1-201ENST00000454907 1746 ntBASIC14.86□□□□□ -0.03
CDKL3Q8IVW4 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CDKL3Q8IVW4 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CDKL3Q8IVW4 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CDKL3Q8IVW4 ATP2B3-201ENST00000263519 6420 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CDKL3Q8IVW4 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC14.86□□□□□ -0.03
CDKL3Q8IVW4 RAPGEF3-205ENST00000449771 6061 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
CDKL3Q8IVW4 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC14.85□□□□□ -0.03
CDKL3Q8IVW4 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
CDKL3Q8IVW4 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CDKL3Q8IVW4 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CDKL3Q8IVW4 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CDKL3Q8IVW4 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CDKL3Q8IVW4 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
CDKL3Q8IVW4 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CDKL3Q8IVW4 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
CDKL3Q8IVW4 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CDKL3Q8IVW4 LINC01873-201ENST00000428647 1679 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CDKL3Q8IVW4 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC14.85□□□□□ -0.03
CDKL3Q8IVW4 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CDKL3Q8IVW4 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
CDKL3Q8IVW4 CMTR2-201ENST00000338099 4869 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CDKL3Q8IVW4 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CDKL3Q8IVW4 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CDKL3Q8IVW4 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
CDKL3Q8IVW4 AL035633.1-201ENST00000406139 838 ntBASIC14.85□□□□□ -0.03
CDKL3Q8IVW4 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC14.85□□□□□ -0.03
CDKL3Q8IVW4 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CDKL3Q8IVW4 COX20P2-201ENST00000452636 358 ntBASIC14.85□□□□□ -0.03
CDKL3Q8IVW4 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC14.85□□□□□ -0.03
CDKL3Q8IVW4 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC14.85□□□□□ -0.03
CDKL3Q8IVW4 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC14.85□□□□□ -0.03
CDKL3Q8IVW4 RPS24-214ENST00000613865 538 ntTSL 5 BASIC14.85□□□□□ -0.03
CDKL3Q8IVW4 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC14.85□□□□□ -0.03
CDKL3Q8IVW4 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CDKL3Q8IVW4 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
CDKL3Q8IVW4 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CDKL3Q8IVW4 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
CDKL3Q8IVW4 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC14.85□□□□□ -0.03
CDKL3Q8IVW4 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
CDKL3Q8IVW4 POM121-201ENST00000358357 5320 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
CDKL3Q8IVW4 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CDKL3Q8IVW4 TMEM87A-201ENST00000307216 1598 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CDKL3Q8IVW4 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CDKL3Q8IVW4 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CDKL3Q8IVW4 ITGB3-201ENST00000559488 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CDKL3Q8IVW4 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC14.84□□□□□ -0.03
CDKL3Q8IVW4 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
CDKL3Q8IVW4 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
CDKL3Q8IVW4 COASY-211ENST00000590958 1976 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CDKL3Q8IVW4 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CDKL3Q8IVW4 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
CDKL3Q8IVW4 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC14.84□□□□□ -0.03
CDKL3Q8IVW4 C19orf18-201ENST00000314391 915 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CDKL3Q8IVW4 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
CDKL3Q8IVW4 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
CDKL3Q8IVW4 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC14.84□□□□□ -0.03
CDKL3Q8IVW4 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC14.84□□□□□ -0.03
CDKL3Q8IVW4 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC14.84□□□□□ -0.03
CDKL3Q8IVW4 KRT17P8-201ENST00000540749 863 ntBASIC14.84□□□□□ -0.03
CDKL3Q8IVW4 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC14.84□□□□□ -0.03
CDKL3Q8IVW4 AC009884.2-201ENST00000603110 324 ntBASIC14.84□□□□□ -0.03
CDKL3Q8IVW4 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC14.84□□□□□ -0.03
CDKL3Q8IVW4 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC14.84□□□□□ -0.03
CDKL3Q8IVW4 AL162274.1-201ENST00000617191 1098 ntBASIC14.84□□□□□ -0.03
CDKL3Q8IVW4 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC14.84□□□□□ -0.03
CDKL3Q8IVW4 XPO7-201ENST00000252512 4861 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CDKL3Q8IVW4 PPIP5K1-209ENST00000420765 5718 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
CDKL3Q8IVW4 ALDH7A1-201ENST00000409134 4964 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
CDKL3Q8IVW4 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CDKL3Q8IVW4 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CDKL3Q8IVW4 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CDKL3Q8IVW4 JMJD6-203ENST00000445478 5303 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CDKL3Q8IVW4 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
CDKL3Q8IVW4 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CDKL3Q8IVW4 MAPT-IT1-201ENST00000624111 3016 ntBASIC14.84□□□□□ -0.03
CDKL3Q8IVW4 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC14.84□□□□□ -0.03
CDKL3Q8IVW4 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CDKL3Q8IVW4 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
CDKL3Q8IVW4 SYT1-204ENST00000457153 4592 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.03
CDKL3Q8IVW4 ADAMTS13-202ENST00000356589 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
CDKL3Q8IVW4 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
CDKL3Q8IVW4 EFHC1-230ENST00000637263 2089 ntTSL 5 BASIC14.83□□□□□ -0.03
CDKL3Q8IVW4 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC14.83□□□□□ -0.03
CDKL3Q8IVW4 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC14.83□□□□□ -0.03
CDKL3Q8IVW4 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
CDKL3Q8IVW4 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
CDKL3Q8IVW4 AGAP10P-201ENST00000454844 2418 ntBASIC14.83□□□□□ -0.04
CDKL3Q8IVW4 FLAD1-206ENST00000368432 1839 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CDKL3Q8IVW4 ARHGEF10-207ENST00000520359 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
CDKL3Q8IVW4 DDX31-204ENST00000372159 4577 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
CDKL3Q8IVW4 AC015818.8-201ENST00000587907 1519 ntBASIC14.83□□□□□ -0.04
CDKL3Q8IVW4 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC14.83□□□□□ -0.04
CDKL3Q8IVW4 DHCR24-201ENST00000371269 4250 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CDKL3Q8IVW4 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CDKL3Q8IVW4 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC14.83□□□□□ -0.04
CDKL3Q8IVW4 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC14.83□□□□□ -0.04
CDKL3Q8IVW4 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
CDKL3Q8IVW4 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
CDKL3Q8IVW4 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 73.6 ms