Protein–RNA interactions for Protein: Q6DD88

ATL3, Atlastin-3, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3Q6DD88 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
ATL3Q6DD88 TEX26-AS1-205ENST00000585870 2053 ntTSL 2 BASIC16.46■□□□□ 0.22
ATL3Q6DD88 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC16.45■□□□□ 0.22
ATL3Q6DD88 AL590824.1-201ENST00000403828 1349 ntBASIC16.45■□□□□ 0.22
ATL3Q6DD88 RXRG-204ENST00000619224 2252 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
ATL3Q6DD88 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
ATL3Q6DD88 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
ATL3Q6DD88 AGAP5-201ENST00000374094 2394 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
ATL3Q6DD88 ASS1-203ENST00000372393 1548 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
ATL3Q6DD88 EHD1-202ENST00000359393 3618 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
ATL3Q6DD88 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
ATL3Q6DD88 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
ATL3Q6DD88 CFAP43-201ENST00000278064 2963 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
ATL3Q6DD88 PGAP2-202ENST00000300730 1843 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
ATL3Q6DD88 PGAP2-203ENST00000396986 1837 ntTSL 2 BASIC16.45■□□□□ 0.22
ATL3Q6DD88 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC16.45■□□□□ 0.22
ATL3Q6DD88 CYP20A1-201ENST00000356079 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
ATL3Q6DD88 KIF12-201ENST00000374118 2001 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
ATL3Q6DD88 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
ATL3Q6DD88 ENO2-201ENST00000229277 2423 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
ATL3Q6DD88 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
ATL3Q6DD88 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
ATL3Q6DD88 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
ATL3Q6DD88 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC16.45■□□□□ 0.22
ATL3Q6DD88 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
ATL3Q6DD88 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC16.45■□□□□ 0.22
ATL3Q6DD88 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC16.45■□□□□ 0.22
ATL3Q6DD88 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
ATL3Q6DD88 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
ATL3Q6DD88 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
ATL3Q6DD88 USB1-202ENST00000423271 1217 ntTSL 2 BASIC16.45■□□□□ 0.22
ATL3Q6DD88 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC16.45■□□□□ 0.22
ATL3Q6DD88 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC16.45■□□□□ 0.22
ATL3Q6DD88 KRT43P-201ENST00000434019 910 ntBASIC16.45■□□□□ 0.22
ATL3Q6DD88 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
ATL3Q6DD88 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
ATL3Q6DD88 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
ATL3Q6DD88 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
ATL3Q6DD88 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC16.45■□□□□ 0.22
ATL3Q6DD88 TECR-220ENST00000600083 1204 ntTSL 2 BASIC16.45■□□□□ 0.22
ATL3Q6DD88 AC009884.2-201ENST00000603110 324 ntBASIC16.45■□□□□ 0.22
ATL3Q6DD88 AL358472.5-202ENST00000641448 1267 ntBASIC16.45■□□□□ 0.22
ATL3Q6DD88 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC16.45■□□□□ 0.22
ATL3Q6DD88 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
ATL3Q6DD88 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC16.45■□□□□ 0.22
ATL3Q6DD88 RCC2P1-201ENST00000452257 1476 ntBASIC16.45■□□□□ 0.22
ATL3Q6DD88 AC126335.2-201ENST00000623362 4637 ntBASIC16.45■□□□□ 0.22
ATL3Q6DD88 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC16.45■□□□□ 0.22
ATL3Q6DD88 AC244394.1-201ENST00000435000 1665 ntBASIC16.45■□□□□ 0.22
ATL3Q6DD88 ARSH-201ENST00000381130 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
ATL3Q6DD88 MED6-201ENST00000256379 1995 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
ATL3Q6DD88 RIOK3-207ENST00000581585 1966 ntTSL 2 BASIC16.45■□□□□ 0.22
ATL3Q6DD88 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
ATL3Q6DD88 ITGB3-201ENST00000559488 3995 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
ATL3Q6DD88 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
ATL3Q6DD88 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC16.45■□□□□ 0.22
ATL3Q6DD88 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
ATL3Q6DD88 AC114271.1-201ENST00000612689 2813 ntBASIC16.45■□□□□ 0.22
ATL3Q6DD88 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
ATL3Q6DD88 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC16.45■□□□□ 0.22
ATL3Q6DD88 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
ATL3Q6DD88 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
ATL3Q6DD88 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
ATL3Q6DD88 CDH16-204ENST00000565796 2694 ntTSL 2 BASIC16.44■□□□□ 0.22
ATL3Q6DD88 USP39-220ENST00000613444 2161 ntTSL 2 BASIC16.44■□□□□ 0.22
ATL3Q6DD88 CPNE2-204ENST00000565874 1976 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
ATL3Q6DD88 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC16.44■□□□□ 0.22
ATL3Q6DD88 ACTR10-201ENST00000254286 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
ATL3Q6DD88 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC16.44■□□□□ 0.22
ATL3Q6DD88 CPT1B-202ENST00000360719 2319 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
ATL3Q6DD88 LDB3-209ENST00000623056 2314 ntTSL 5 BASIC16.44■□□□□ 0.22
ATL3Q6DD88 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
ATL3Q6DD88 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC16.44■□□□□ 0.22
ATL3Q6DD88 C19orf33-201ENST00000301246 467 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
ATL3Q6DD88 LBX2-201ENST00000341396 886 ntTSL 3 BASIC16.44■□□□□ 0.22
ATL3Q6DD88 GZMB-202ENST00000382540 816 ntTSL 5 BASIC16.44■□□□□ 0.22
ATL3Q6DD88 PTPA-220ENST00000436883 532 ntTSL 4 BASIC16.44■□□□□ 0.22
ATL3Q6DD88 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC16.44■□□□□ 0.22
ATL3Q6DD88 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC16.44■□□□□ 0.22
ATL3Q6DD88 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC16.44■□□□□ 0.22
ATL3Q6DD88 AC003686.1-201ENST00000550956 1034 ntBASIC16.44■□□□□ 0.22
ATL3Q6DD88 AC140658.4-201ENST00000561990 352 ntBASIC16.44■□□□□ 0.22
ATL3Q6DD88 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC16.44■□□□□ 0.22
ATL3Q6DD88 AC011479.1-202ENST00000591889 528 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
ATL3Q6DD88 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC16.44■□□□□ 0.22
ATL3Q6DD88 AL355385.1-201ENST00000606123 409 ntBASIC16.44■□□□□ 0.22
ATL3Q6DD88 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC16.44■□□□□ 0.22
ATL3Q6DD88 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
ATL3Q6DD88 Z98259.2-201ENST00000641583 609 ntBASIC16.44■□□□□ 0.22
ATL3Q6DD88 SYT1-204ENST00000457153 4592 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
ATL3Q6DD88 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
ATL3Q6DD88 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC16.44■□□□□ 0.22
ATL3Q6DD88 KRBA2-202ENST00000396267 2562 ntTSL 2 BASIC16.44■□□□□ 0.22
ATL3Q6DD88 CXorf40A-212ENST00000514208 1840 ntAPPRIS ALT1 TSL 5 BASIC16.44■□□□□ 0.22
ATL3Q6DD88 F2-205ENST00000530231 1849 ntTSL 5 BASIC16.44■□□□□ 0.22
ATL3Q6DD88 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
ATL3Q6DD88 SELENOV-202ENST00000423711 1701 ntTSL 5 BASIC16.44■□□□□ 0.22
ATL3Q6DD88 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
ATL3Q6DD88 LIMK1-208ENST00000538333 2170 ntTSL 2 BASIC16.44■□□□□ 0.22
ATL3Q6DD88 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC16.44■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms