Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 FAM163B-201ENST00000356873 1131 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LYSMD4Q5XG99 TNNI2-202ENST00000381905 706 ntAPPRIS ALT1 TSL 3 BASIC13.99□□□□□ -0.17
LYSMD4Q5XG99 TNNI2-203ENST00000381906 745 ntAPPRIS P3 TSL 3 BASIC13.99□□□□□ -0.17
LYSMD4Q5XG99 TNNI2-204ENST00000381911 743 ntAPPRIS P3 TSL 2 BASIC13.99□□□□□ -0.17
LYSMD4Q5XG99 KRT18P4-201ENST00000422599 1288 ntBASIC13.99□□□□□ -0.17
LYSMD4Q5XG99 ASS1P2-201ENST00000439895 1223 ntBASIC13.99□□□□□ -0.17
LYSMD4Q5XG99 KRT18P62-201ENST00000446618 1287 ntBASIC13.99□□□□□ -0.17
LYSMD4Q5XG99 TAGLN3-203ENST00000455401 1164 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LYSMD4Q5XG99 TMEM222-204ENST00000466759 368 ntTSL 3 BASIC13.99□□□□□ -0.17
LYSMD4Q5XG99 IGKV1D-43-201ENST00000468879 532 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
LYSMD4Q5XG99 EEF1GP8-201ENST00000506566 1154 ntBASIC13.99□□□□□ -0.17
LYSMD4Q5XG99 MRPS36-204ENST00000512880 1200 ntTSL 5 BASIC13.99□□□□□ -0.17
LYSMD4Q5XG99 AC068831.5-201ENST00000557387 328 ntBASIC13.99□□□□□ -0.17
LYSMD4Q5XG99 AC023825.2-201ENST00000562970 672 ntTSL 2 BASIC13.99□□□□□ -0.17
LYSMD4Q5XG99 MRPS36-205ENST00000602380 1200 ntTSL 2 BASIC13.99□□□□□ -0.17
LYSMD4Q5XG99 AL078590.3-205ENST00000606039 465 ntTSL 5 BASIC13.99□□□□□ -0.17
LYSMD4Q5XG99 AL009176.1-201ENST00000607876 650 ntBASIC13.99□□□□□ -0.17
LYSMD4Q5XG99 TP53-221ENST00000615910 1149 ntTSL 5 BASIC13.99□□□□□ -0.17
LYSMD4Q5XG99 PROX1-AS1-235ENST00000628896 711 ntTSL 5 BASIC13.99□□□□□ -0.17
LYSMD4Q5XG99 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC13.99□□□□□ -0.17
LYSMD4Q5XG99 MX1-218ENST00000619682 1980 ntTSL 5 BASIC13.99□□□□□ -0.17
LYSMD4Q5XG99 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC13.99□□□□□ -0.17
LYSMD4Q5XG99 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LYSMD4Q5XG99 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC13.99□□□□□ -0.17
LYSMD4Q5XG99 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC13.99□□□□□ -0.17
LYSMD4Q5XG99 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
LYSMD4Q5XG99 PHB-210ENST00000511832 1509 ntTSL 2 BASIC13.99□□□□□ -0.17
LYSMD4Q5XG99 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LYSMD4Q5XG99 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
LYSMD4Q5XG99 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
LYSMD4Q5XG99 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
LYSMD4Q5XG99 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LYSMD4Q5XG99 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
LYSMD4Q5XG99 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LYSMD4Q5XG99 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC13.99□□□□□ -0.17
LYSMD4Q5XG99 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LYSMD4Q5XG99 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
LYSMD4Q5XG99 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
LYSMD4Q5XG99 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LYSMD4Q5XG99 CICP6-201ENST00000457191 2729 ntBASIC13.99□□□□□ -0.17
LYSMD4Q5XG99 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
LYSMD4Q5XG99 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
LYSMD4Q5XG99 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC13.98□□□□□ -0.17
LYSMD4Q5XG99 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC13.98□□□□□ -0.17
LYSMD4Q5XG99 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LYSMD4Q5XG99 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LYSMD4Q5XG99 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
LYSMD4Q5XG99 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC13.98□□□□□ -0.17
LYSMD4Q5XG99 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC13.98□□□□□ -0.17
LYSMD4Q5XG99 GOT2-202ENST00000434819 1615 ntTSL 2 BASIC13.98□□□□□ -0.17
LYSMD4Q5XG99 PDXDC2P-206ENST00000534700 1315 ntBASIC13.98□□□□□ -0.17
LYSMD4Q5XG99 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC13.98□□□□□ -0.17
LYSMD4Q5XG99 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
LYSMD4Q5XG99 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
LYSMD4Q5XG99 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC13.98□□□□□ -0.17
LYSMD4Q5XG99 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC13.98□□□□□ -0.17
LYSMD4Q5XG99 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LYSMD4Q5XG99 ZNF226-201ENST00000300823 817 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
LYSMD4Q5XG99 HNRNPA1-201ENST00000330752 1294 ntTSL 5 BASIC13.98□□□□□ -0.17
LYSMD4Q5XG99 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LYSMD4Q5XG99 OPN1MW2-201ENST00000369929 1261 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LYSMD4Q5XG99 TRBV7-3-201ENST00000390361 397 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
LYSMD4Q5XG99 AL512599.1-201ENST00000430724 685 ntBASIC13.98□□□□□ -0.17
LYSMD4Q5XG99 HORMAD2-AS1-202ENST00000432568 727 ntTSL 3 BASIC13.98□□□□□ -0.17
LYSMD4Q5XG99 AL353150.1-201ENST00000456944 583 ntTSL 2 BASIC13.98□□□□□ -0.17
LYSMD4Q5XG99 AADACL2-AS1-202ENST00000483843 628 ntTSL 5 BASIC13.98□□□□□ -0.17
LYSMD4Q5XG99 AC106047.2-201ENST00000511723 743 ntBASIC13.98□□□□□ -0.17
LYSMD4Q5XG99 AC100858.1-201ENST00000514059 1228 ntBASIC13.98□□□□□ -0.17
LYSMD4Q5XG99 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LYSMD4Q5XG99 KRT18P37-201ENST00000520711 1282 ntBASIC13.98□□□□□ -0.17
LYSMD4Q5XG99 TMEM123-208ENST00000532161 743 ntAPPRIS ALT2 TSL 3 BASIC13.98□□□□□ -0.17
LYSMD4Q5XG99 AL162632.1-201ENST00000546784 548 ntTSL 4 BASIC13.98□□□□□ -0.17
LYSMD4Q5XG99 AC009779.3-204ENST00000549424 367 ntTSL 3 BASIC13.98□□□□□ -0.17
LYSMD4Q5XG99 TROAP-213ENST00000550709 778 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
LYSMD4Q5XG99 AL132994.1-201ENST00000554098 400 ntBASIC13.98□□□□□ -0.17
LYSMD4Q5XG99 TGFB3-204ENST00000556285 1280 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
LYSMD4Q5XG99 AC015712.5-201ENST00000558568 564 ntTSL 2 BASIC13.98□□□□□ -0.17
LYSMD4Q5XG99 SRP14-204ENST00000558720 780 ntTSL 2 BASIC13.98□□□□□ -0.17
LYSMD4Q5XG99 NT5C-204ENST00000578337 582 ntTSL 2 BASIC13.98□□□□□ -0.17
LYSMD4Q5XG99 AC004528.1-201ENST00000588380 641 ntTSL 5 BASIC13.98□□□□□ -0.17
LYSMD4Q5XG99 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
LYSMD4Q5XG99 AC215219.1-201ENST00000400706 1817 ntBASIC13.98□□□□□ -0.17
LYSMD4Q5XG99 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LYSMD4Q5XG99 UBOX5-AS1-201ENST00000446537 1792 ntTSL 2 BASIC13.98□□□□□ -0.17
LYSMD4Q5XG99 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LYSMD4Q5XG99 SCAMP1-AS1-201ENST00000421004 1479 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
LYSMD4Q5XG99 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LYSMD4Q5XG99 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
LYSMD4Q5XG99 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LYSMD4Q5XG99 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LYSMD4Q5XG99 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
LYSMD4Q5XG99 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LYSMD4Q5XG99 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
LYSMD4Q5XG99 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
LYSMD4Q5XG99 AL161772.1-201ENST00000610494 4412 ntBASIC13.97□□□□□ -0.17
LYSMD4Q5XG99 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
LYSMD4Q5XG99 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC13.97□□□□□ -0.17
LYSMD4Q5XG99 PPT1-215ENST00000641471 2368 ntBASIC13.97□□□□□ -0.17
LYSMD4Q5XG99 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
LYSMD4Q5XG99 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 59.7 ms