Protein–RNA interactions for Protein: Q5VT40

FAM78B, Protein FAM78B, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM78BQ5VT40 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
FAM78BQ5VT40 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
FAM78BQ5VT40 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC11.56□□□□□ -0.56
FAM78BQ5VT40 APLP2-201ENST00000263574 3727 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
FAM78BQ5VT40 PEX1-201ENST00000248633 4385 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
FAM78BQ5VT40 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
FAM78BQ5VT40 TMEM260-201ENST00000261556 4264 ntAPPRIS P1 TSL 2 BASIC11.56□□□□□ -0.56
FAM78BQ5VT40 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
FAM78BQ5VT40 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
FAM78BQ5VT40 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
FAM78BQ5VT40 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC11.56□□□□□ -0.56
FAM78BQ5VT40 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC11.56□□□□□ -0.56
FAM78BQ5VT40 MPV17-208ENST00000405076 603 ntTSL 5 BASIC11.56□□□□□ -0.56
FAM78BQ5VT40 AC055876.3-201ENST00000431496 288 ntBASIC11.56□□□□□ -0.56
FAM78BQ5VT40 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC11.56□□□□□ -0.56
FAM78BQ5VT40 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
FAM78BQ5VT40 SLC26A6-213ENST00000455886 2460 ntTSL 2 BASIC11.56□□□□□ -0.56
FAM78BQ5VT40 DRD5P1-201ENST00000456605 1438 ntBASIC11.56□□□□□ -0.56
FAM78BQ5VT40 AP001999.1-201ENST00000513405 3684 ntTSL 2 BASIC11.56□□□□□ -0.56
FAM78BQ5VT40 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC11.56□□□□□ -0.56
FAM78BQ5VT40 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
FAM78BQ5VT40 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC11.56□□□□□ -0.56
FAM78BQ5VT40 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC11.56□□□□□ -0.56
FAM78BQ5VT40 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC11.56□□□□□ -0.56
FAM78BQ5VT40 ZNF890P-202ENST00000530367 1156 ntBASIC11.56□□□□□ -0.56
FAM78BQ5VT40 FOS-202ENST00000535987 1402 ntTSL 2 BASIC11.56□□□□□ -0.56
FAM78BQ5VT40 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC11.56□□□□□ -0.56
FAM78BQ5VT40 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC11.56□□□□□ -0.56
FAM78BQ5VT40 GFAP-214ENST00000588735 6538 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
FAM78BQ5VT40 LIX1L-201ENST00000604000 3975 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
FAM78BQ5VT40 AC107373.2-201ENST00000607735 490 ntBASIC11.56□□□□□ -0.56
FAM78BQ5VT40 AC138649.4-201ENST00000612222 287 ntBASIC11.56□□□□□ -0.56
FAM78BQ5VT40 5S_rRNA.22-201ENST00000614916 106 ntBASIC11.56□□□□□ -0.56
FAM78BQ5VT40 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC11.56□□□□□ -0.56
FAM78BQ5VT40 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
FAM78BQ5VT40 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC11.56□□□□□ -0.56
FAM78BQ5VT40 CACNA1G-222ENST00000510366 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
FAM78BQ5VT40 CACNA1G-227ENST00000513964 6735 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
FAM78BQ5VT40 PCDHGA5-201ENST00000518069 4602 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
FAM78BQ5VT40 CYTH1-215ENST00000591455 3286 ntAPPRIS P3 TSL 2 BASIC11.56□□□□□ -0.56
FAM78BQ5VT40 MYOM3-201ENST00000338909 2693 ntTSL 2 BASIC11.56□□□□□ -0.56
FAM78BQ5VT40 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC11.56□□□□□ -0.56
FAM78BQ5VT40 NRP2-204ENST00000360409 6662 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
FAM78BQ5VT40 NCOR2-204ENST00000405201 8533 ntAPPRIS P4 TSL 1 (best) BASIC11.56□□□□□ -0.56
FAM78BQ5VT40 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC11.56□□□□□ -0.56
FAM78BQ5VT40 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
FAM78BQ5VT40 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC11.56□□□□□ -0.56
FAM78BQ5VT40 TP73-213ENST00000604479 1623 ntTSL 5 BASIC11.56□□□□□ -0.56
FAM78BQ5VT40 RRBP1-201ENST00000246043 4737 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
FAM78BQ5VT40 KREMEN1-202ENST00000400335 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
FAM78BQ5VT40 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC11.56□□□□□ -0.56
FAM78BQ5VT40 SH3PXD2A-203ENST00000369774 11468 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
FAM78BQ5VT40 DHX38-201ENST00000268482 4608 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
FAM78BQ5VT40 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
FAM78BQ5VT40 CAMKV-215ENST00000488336 2905 ntTSL 2 BASIC11.56□□□□□ -0.56
FAM78BQ5VT40 PCDHGB7-202ENST00000612073 2785 ntAPPRIS ALT2 BASIC11.56□□□□□ -0.56
FAM78BQ5VT40 SLC44A1-202ENST00000374723 9640 ntAPPRIS ALT1 TSL 1 (best) BASIC11.56□□□□□ -0.56
FAM78BQ5VT40 ARPIN-201ENST00000357484 7591 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
FAM78BQ5VT40 MAGED4B-211ENST00000497164 2482 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
FAM78BQ5VT40 ELN-209ENST00000380576 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
FAM78BQ5VT40 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC11.55□□□□□ -0.56
FAM78BQ5VT40 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC11.55□□□□□ -0.56
FAM78BQ5VT40 OR2I1P-208ENST00000641137 4948 ntBASIC11.55□□□□□ -0.56
FAM78BQ5VT40 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
FAM78BQ5VT40 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
FAM78BQ5VT40 CDK12-201ENST00000430627 5918 ntAPPRIS ALT1 TSL 1 (best) BASIC11.55□□□□□ -0.56
FAM78BQ5VT40 STRIP2-201ENST00000249344 5115 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
FAM78BQ5VT40 CACNA1C-214ENST00000399634 7590 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
FAM78BQ5VT40 CACNA1C-222ENST00000406454 7590 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
FAM78BQ5VT40 EPHA5-203ENST00000432638 3662 ntTSL 5 BASIC11.55□□□□□ -0.56
FAM78BQ5VT40 CCDC57-202ENST00000389641 3000 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
FAM78BQ5VT40 CCDC57-206ENST00000392347 3000 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
FAM78BQ5VT40 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC11.55□□□□□ -0.56
FAM78BQ5VT40 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
FAM78BQ5VT40 HPD-204ENST00000543163 1709 ntTSL 5 BASIC11.55□□□□□ -0.56
FAM78BQ5VT40 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC11.55□□□□□ -0.56
FAM78BQ5VT40 INMT-201ENST00000013222 2559 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
FAM78BQ5VT40 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
FAM78BQ5VT40 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC11.55□□□□□ -0.56
FAM78BQ5VT40 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC11.55□□□□□ -0.56
FAM78BQ5VT40 KIAA0895-203ENST00000338533 4132 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
FAM78BQ5VT40 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
FAM78BQ5VT40 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
FAM78BQ5VT40 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
FAM78BQ5VT40 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
FAM78BQ5VT40 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
FAM78BQ5VT40 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC11.55□□□□□ -0.56
FAM78BQ5VT40 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC11.55□□□□□ -0.56
FAM78BQ5VT40 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
FAM78BQ5VT40 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC11.55□□□□□ -0.56
FAM78BQ5VT40 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC11.55□□□□□ -0.56
FAM78BQ5VT40 AC007969.1-201ENST00000433675 447 ntBASIC11.55□□□□□ -0.56
FAM78BQ5VT40 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
FAM78BQ5VT40 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC11.55□□□□□ -0.56
FAM78BQ5VT40 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC11.55□□□□□ -0.56
FAM78BQ5VT40 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC11.55□□□□□ -0.56
FAM78BQ5VT40 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC11.55□□□□□ -0.56
FAM78BQ5VT40 GLI4-203ENST00000517468 963 ntTSL 5 BASIC11.55□□□□□ -0.56
FAM78BQ5VT40 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
FAM78BQ5VT40 RAB35-202ENST00000534951 939 ntTSL 2 BASIC11.55□□□□□ -0.56
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms