Protein–RNA interactions for Protein: Q08722

CD47, Leukocyte surface antigen CD47, humanhuman

Predictions only

Length 323 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD47Q08722 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CD47Q08722 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CD47Q08722 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CD47Q08722 AC098850.1-201ENST00000419919 790 ntBASIC13.48□□□□□ -0.25
CD47Q08722 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC13.48□□□□□ -0.25
CD47Q08722 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC13.48□□□□□ -0.25
CD47Q08722 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC13.48□□□□□ -0.25
CD47Q08722 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC13.48□□□□□ -0.25
CD47Q08722 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CD47Q08722 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC13.48□□□□□ -0.25
CD47Q08722 CDK4-206ENST00000549606 558 ntTSL 2 BASIC13.48□□□□□ -0.25
CD47Q08722 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC13.48□□□□□ -0.25
CD47Q08722 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC13.48□□□□□ -0.25
CD47Q08722 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC13.48□□□□□ -0.25
CD47Q08722 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC13.48□□□□□ -0.25
CD47Q08722 SPCS2P1-201ENST00000561636 679 ntBASIC13.48□□□□□ -0.25
CD47Q08722 AC124283.3-201ENST00000570869 594 ntBASIC13.48□□□□□ -0.25
CD47Q08722 IFT20-206ENST00000578122 834 ntTSL 2 BASIC13.48□□□□□ -0.25
CD47Q08722 IFT20-208ENST00000578985 831 ntTSL 3 BASIC13.48□□□□□ -0.25
CD47Q08722 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
CD47Q08722 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC13.48□□□□□ -0.25
CD47Q08722 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC13.48□□□□□ -0.25
CD47Q08722 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CD47Q08722 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CD47Q08722 COL18A1-AS1-201ENST00000397787 3425 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CD47Q08722 PRKCB-201ENST00000303531 7969 ntAPPRIS P4 TSL 1 (best) BASIC13.48□□□□□ -0.25
CD47Q08722 PPFIA4-203ENST00000367240 6434 ntAPPRIS P5 TSL 5 BASIC13.48□□□□□ -0.25
CD47Q08722 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC13.48□□□□□ -0.25
CD47Q08722 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CD47Q08722 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CD47Q08722 MED16-202ENST00000312090 3229 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
CD47Q08722 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CD47Q08722 TP73-211ENST00000604074 4806 ntTSL 5 BASIC13.48□□□□□ -0.25
CD47Q08722 EGFR-207ENST00000455089 3844 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CD47Q08722 PHLDB2-204ENST00000431670 6127 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CD47Q08722 AC127496.1-201ENST00000576234 3133 ntTSL 2 BASIC13.48□□□□□ -0.25
CD47Q08722 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
CD47Q08722 RIC1-204ENST00000418622 6658 ntTSL 5 BASIC13.48□□□□□ -0.25
CD47Q08722 MAGI1-218ENST00000621418 6225 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CD47Q08722 AP000437.1-201ENST00000624057 2085 ntBASIC13.48□□□□□ -0.25
CD47Q08722 BHLHE40-AS1-204ENST00000620618 2355 ntTSL 2 BASIC13.47□□□□□ -0.25
CD47Q08722 ZNF683-205ENST00000436292 1712 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
CD47Q08722 CNN2-202ENST00000348419 2033 ntTSL 2 BASIC13.47□□□□□ -0.25
CD47Q08722 GRM5-AS1-201ENST00000526448 4821 ntTSL 5 BASIC13.47□□□□□ -0.25
CD47Q08722 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CD47Q08722 ARHGEF4-217ENST00000611048 3486 ntTSL 5 BASIC13.47□□□□□ -0.25
CD47Q08722 DISC1-221ENST00000620189 6689 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
CD47Q08722 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
CD47Q08722 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CD47Q08722 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CD47Q08722 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC13.47□□□□□ -0.25
CD47Q08722 PTH2R-201ENST00000272847 2713 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CD47Q08722 AL162431.2-201ENST00000358073 2424 ntTSL 2 BASIC13.47□□□□□ -0.25
CD47Q08722 AC092053.3-201ENST00000641308 4975 ntBASIC13.47□□□□□ -0.25
CD47Q08722 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CD47Q08722 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CD47Q08722 RNU1-114P-201ENST00000365297 166 ntBASIC13.47□□□□□ -0.25
CD47Q08722 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CD47Q08722 BRF1-202ENST00000379932 884 ntTSL 5 BASIC13.47□□□□□ -0.25
CD47Q08722 AC236430.1-201ENST00000402231 743 ntBASIC13.47□□□□□ -0.25
CD47Q08722 AL139094.1-201ENST00000405549 1188 ntBASIC13.47□□□□□ -0.25
CD47Q08722 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC13.47□□□□□ -0.25
CD47Q08722 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC13.47□□□□□ -0.25
CD47Q08722 GALT-202ENST00000450095 1280 ntTSL 2 BASIC13.47□□□□□ -0.25
CD47Q08722 CYP51A1-AS1-201ENST00000453068 2957 ntTSL 5 BASIC13.47□□□□□ -0.25
CD47Q08722 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
CD47Q08722 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC13.47□□□□□ -0.25
CD47Q08722 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC13.47□□□□□ -0.25
CD47Q08722 HNRNPA1P13-201ENST00000510646 963 ntBASIC13.47□□□□□ -0.25
CD47Q08722 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC13.47□□□□□ -0.25
CD47Q08722 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC13.47□□□□□ -0.25
CD47Q08722 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC13.47□□□□□ -0.25
CD47Q08722 CHCHD2P3-201ENST00000603038 451 ntBASIC13.47□□□□□ -0.25
CD47Q08722 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
CD47Q08722 NTRK3-AS1-201ENST00000569588 2663 ntTSL 2 BASIC13.47□□□□□ -0.25
CD47Q08722 TARDBP-201ENST00000240185 5367 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CD47Q08722 NPFFR1-201ENST00000277942 8921 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
CD47Q08722 SALL4P5-201ENST00000419001 1760 ntBASIC13.47□□□□□ -0.25
CD47Q08722 CAP1-203ENST00000372797 3105 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
CD47Q08722 MAP7D2-201ENST00000379643 3918 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
CD47Q08722 CD300LB-202ENST00000392621 2286 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
CD47Q08722 LINC01271-201ENST00000441214 2250 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CD47Q08722 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
CD47Q08722 CCNE2-205ENST00000520509 3330 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
CD47Q08722 TICRR-201ENST00000268138 6775 ntAPPRIS P3 TSL 5 BASIC13.47□□□□□ -0.25
CD47Q08722 EWSAT1-201ENST00000415504 2214 ntTSL 2 BASIC13.47□□□□□ -0.25
CD47Q08722 PRPF8-205ENST00000572621 7445 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
CD47Q08722 C1QTNF1-203ENST00000354124 2714 ntAPPRIS P1 TSL 4 BASIC13.47□□□□□ -0.25
CD47Q08722 CRISPLD2-209ENST00000567845 2178 ntAPPRIS ALT1 TSL 5 BASIC13.47□□□□□ -0.25
CD47Q08722 ZSCAN16-AS1-201ENST00000600652 2163 ntTSL 2 BASIC13.47□□□□□ -0.25
CD47Q08722 AAR2-201ENST00000320849 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CD47Q08722 PJA1-203ENST00000374583 2692 ntAPPRIS P4 BASIC13.47□□□□□ -0.25
CD47Q08722 PSMC1-201ENST00000261303 4448 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CD47Q08722 THSD4-201ENST00000261862 3133 ntTSL 5 BASIC13.46□□□□□ -0.25
CD47Q08722 PRR29-202ENST00000412177 3127 ntAPPRIS P3 TSL 2 BASIC13.46□□□□□ -0.25
CD47Q08722 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
CD47Q08722 RNF43-205ENST00000581868 2610 ntTSL 2 BASIC13.46□□□□□ -0.25
CD47Q08722 PPP4R3B-205ENST00000616288 4310 ntAPPRIS ALT1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CD47Q08722 AC125807.2-201ENST00000513358 3514 ntBASIC13.46□□□□□ -0.25
CD47Q08722 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms