Protein–RNA interactions for Protein: P98172

EFNB1, Ephrin-B1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB1P98172 HMGCS2-201ENST00000369406 2428 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
EFNB1P98172 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
EFNB1P98172 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC12.87□□□□□ -0.35
EFNB1P98172 NSF-201ENST00000398238 3983 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
EFNB1P98172 TBC1D9B-208ENST00000519746 2755 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
EFNB1P98172 PGM3-201ENST00000283977 2219 ntTSL 5 BASIC12.86□□□□□ -0.35
EFNB1P98172 TMEM192-203ENST00000506087 2225 ntTSL 2 BASIC12.86□□□□□ -0.35
EFNB1P98172 FUT3-207ENST00000589620 2239 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
EFNB1P98172 COL6A2-203ENST00000397763 3101 ntTSL 5 BASIC12.86□□□□□ -0.35
EFNB1P98172 CCT8L1P-201ENST00000465400 1674 ntBASIC12.86□□□□□ -0.35
EFNB1P98172 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
EFNB1P98172 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
EFNB1P98172 TMEM41A-203ENST00000421852 2827 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
EFNB1P98172 C1S-202ENST00000360817 2635 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
EFNB1P98172 FAS-202ENST00000352159 1722 ntTSL 5 BASIC12.86□□□□□ -0.35
EFNB1P98172 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
EFNB1P98172 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
EFNB1P98172 CAP1-203ENST00000372797 3105 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
EFNB1P98172 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
EFNB1P98172 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
EFNB1P98172 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
EFNB1P98172 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
EFNB1P98172 AC103592.1-201ENST00000394513 664 ntBASIC12.86□□□□□ -0.35
EFNB1P98172 AL136309.1-201ENST00000403917 691 ntBASIC12.86□□□□□ -0.35
EFNB1P98172 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC12.86□□□□□ -0.35
EFNB1P98172 AL157407.1-201ENST00000435784 904 ntBASIC12.86□□□□□ -0.35
EFNB1P98172 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC12.86□□□□□ -0.35
EFNB1P98172 AL645933.1-201ENST00000440087 609 ntBASIC12.86□□□□□ -0.35
EFNB1P98172 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
EFNB1P98172 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
EFNB1P98172 AP001889.1-201ENST00000525414 633 ntBASIC12.86□□□□□ -0.35
EFNB1P98172 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC12.86□□□□□ -0.35
EFNB1P98172 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC12.86□□□□□ -0.35
EFNB1P98172 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC12.86□□□□□ -0.35
EFNB1P98172 RN7SL713P-201ENST00000582127 302 ntBASIC12.86□□□□□ -0.35
EFNB1P98172 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC12.86□□□□□ -0.35
EFNB1P98172 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
EFNB1P98172 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC12.86□□□□□ -0.35
EFNB1P98172 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
EFNB1P98172 TICAM1-201ENST00000248244 2676 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
EFNB1P98172 GLP2R-204ENST00000574745 1882 ntTSL 2 BASIC12.86□□□□□ -0.35
EFNB1P98172 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
EFNB1P98172 AC003986.1-201ENST00000452700 1526 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
EFNB1P98172 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC12.86□□□□□ -0.35
EFNB1P98172 FAM200A-202ENST00000449309 2480 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
EFNB1P98172 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
EFNB1P98172 MEAF6-204ENST00000373075 2147 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
EFNB1P98172 NUP62CL-201ENST00000372466 1755 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
EFNB1P98172 HEXA-206ENST00000566304 1795 ntTSL 2 BASIC12.86□□□□□ -0.35
EFNB1P98172 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC12.86□□□□□ -0.35
EFNB1P98172 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC12.86□□□□□ -0.35
EFNB1P98172 ARHGEF4-217ENST00000611048 3486 ntTSL 5 BASIC12.86□□□□□ -0.35
EFNB1P98172 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC12.86□□□□□ -0.35
EFNB1P98172 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
EFNB1P98172 ATP13A1-202ENST00000357324 3861 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
EFNB1P98172 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
EFNB1P98172 SYNE3-201ENST00000334258 3275 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
EFNB1P98172 NSD2-203ENST00000382888 2666 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
EFNB1P98172 EFEMP1-201ENST00000355426 1820 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
EFNB1P98172 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC12.85□□□□□ -0.35
EFNB1P98172 LINC00637-201ENST00000556586 2056 ntTSL 2 BASIC12.85□□□□□ -0.35
EFNB1P98172 PTPN5-205ENST00000477854 2826 ntTSL 5 BASIC12.85□□□□□ -0.35
EFNB1P98172 CDCA7-203ENST00000410019 1488 ntTSL 2 BASIC12.85□□□□□ -0.35
EFNB1P98172 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
EFNB1P98172 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
EFNB1P98172 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
EFNB1P98172 ARHGEF10-207ENST00000520359 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
EFNB1P98172 NAALADL1-201ENST00000340252 2376 ntTSL 5 BASIC12.85□□□□□ -0.35
EFNB1P98172 PSIP1-204ENST00000380738 3364 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
EFNB1P98172 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC12.85□□□□□ -0.35
EFNB1P98172 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
EFNB1P98172 AC104758.3-203ENST00000562938 2123 ntBASIC12.85□□□□□ -0.35
EFNB1P98172 USP31-203ENST00000567975 2142 ntTSL 2 BASIC12.85□□□□□ -0.35
EFNB1P98172 GFI1B-207ENST00000636137 1870 ntTSL 5 BASIC12.85□□□□□ -0.35
EFNB1P98172 HDAC7-209ENST00000427332 3016 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
EFNB1P98172 ACVR1C-204ENST00000409680 1786 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
EFNB1P98172 METAP1D-201ENST00000315796 3419 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
EFNB1P98172 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
EFNB1P98172 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
EFNB1P98172 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
EFNB1P98172 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
EFNB1P98172 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
EFNB1P98172 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
EFNB1P98172 HMGA1P1-201ENST00000415560 1062 ntBASIC12.85□□□□□ -0.35
EFNB1P98172 SLC5A4-AS1-201ENST00000434942 876 ntTSL 3 BASIC12.85□□□□□ -0.35
EFNB1P98172 CHMP1AP1-201ENST00000445563 662 ntBASIC12.85□□□□□ -0.35
EFNB1P98172 TSPY16P-201ENST00000449843 468 ntBASIC12.85□□□□□ -0.35
EFNB1P98172 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC12.85□□□□□ -0.35
EFNB1P98172 INGX-202ENST00000489074 768 ntBASIC12.85□□□□□ -0.35
EFNB1P98172 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC12.85□□□□□ -0.35
EFNB1P98172 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC12.85□□□□□ -0.35
EFNB1P98172 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
EFNB1P98172 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC12.85□□□□□ -0.35
EFNB1P98172 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC12.85□□□□□ -0.35
EFNB1P98172 AC021016.3-201ENST00000608367 477 ntBASIC12.85□□□□□ -0.35
EFNB1P98172 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC12.85□□□□□ -0.35
EFNB1P98172 AC090386.2-201ENST00000623010 1039 ntBASIC12.85□□□□□ -0.35
EFNB1P98172 GNAI2-203ENST00000422163 2407 ntTSL 2 BASIC12.85□□□□□ -0.35
EFNB1P98172 GHET1-201ENST00000627071 1906 ntBASIC12.85□□□□□ -0.35
EFNB1P98172 COPS7B-203ENST00000373608 2563 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms