Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 RPSAP36-202ENST00000494591 1261 ntBASIC12.62□□□□□ -0.39
HIST1H3AP68431 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC12.62□□□□□ -0.39
HIST1H3AP68431 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
HIST1H3AP68431 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC12.62□□□□□ -0.39
HIST1H3AP68431 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC12.62□□□□□ -0.39
HIST1H3AP68431 USB1-203ENST00000539737 1212 ntTSL 2 BASIC12.62□□□□□ -0.39
HIST1H3AP68431 AC011603.2-203ENST00000547387 897 ntTSL 3 BASIC12.62□□□□□ -0.39
HIST1H3AP68431 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC12.62□□□□□ -0.39
HIST1H3AP68431 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
HIST1H3AP68431 AC099684.2-201ENST00000574520 870 ntTSL 5 BASIC12.62□□□□□ -0.39
HIST1H3AP68431 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC12.62□□□□□ -0.39
HIST1H3AP68431 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC12.62□□□□□ -0.39
HIST1H3AP68431 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC12.62□□□□□ -0.39
HIST1H3AP68431 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
HIST1H3AP68431 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
HIST1H3AP68431 CARHSP1-220ENST00000619881 2849 ntAPPRIS P1 TSL 3 BASIC12.62□□□□□ -0.39
HIST1H3AP68431 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC12.62□□□□□ -0.39
HIST1H3AP68431 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
HIST1H3AP68431 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC12.62□□□□□ -0.39
HIST1H3AP68431 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
HIST1H3AP68431 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
HIST1H3AP68431 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
HIST1H3AP68431 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC12.62□□□□□ -0.39
HIST1H3AP68431 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
HIST1H3AP68431 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
HIST1H3AP68431 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC12.62□□□□□ -0.39
HIST1H3AP68431 PAPPA-201ENST00000328252 10959 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
HIST1H3AP68431 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
HIST1H3AP68431 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC12.62□□□□□ -0.39
HIST1H3AP68431 FAM13B-201ENST00000033079 5465 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
HIST1H3AP68431 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC12.61□□□□□ -0.39
HIST1H3AP68431 PCM1-202ENST00000327578 8287 ntTSL 5 BASIC12.61□□□□□ -0.39
HIST1H3AP68431 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
HIST1H3AP68431 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC12.61□□□□□ -0.39
HIST1H3AP68431 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
HIST1H3AP68431 SNX19-213ENST00000534726 1656 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
HIST1H3AP68431 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
HIST1H3AP68431 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
HIST1H3AP68431 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
HIST1H3AP68431 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
HIST1H3AP68431 USP49-203ENST00000394253 9034 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
HIST1H3AP68431 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
HIST1H3AP68431 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
HIST1H3AP68431 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
HIST1H3AP68431 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
HIST1H3AP68431 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
HIST1H3AP68431 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC12.61□□□□□ -0.39
HIST1H3AP68431 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
HIST1H3AP68431 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
HIST1H3AP68431 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
HIST1H3AP68431 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
HIST1H3AP68431 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC12.61□□□□□ -0.39
HIST1H3AP68431 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
HIST1H3AP68431 FAM21FP-201ENST00000426241 1131 ntBASIC12.61□□□□□ -0.39
HIST1H3AP68431 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC12.61□□□□□ -0.39
HIST1H3AP68431 TUBB8P8-201ENST00000458717 1058 ntBASIC12.61□□□□□ -0.39
HIST1H3AP68431 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
HIST1H3AP68431 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC12.61□□□□□ -0.39
HIST1H3AP68431 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC12.61□□□□□ -0.39
HIST1H3AP68431 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC12.61□□□□□ -0.39
HIST1H3AP68431 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC12.61□□□□□ -0.39
HIST1H3AP68431 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
HIST1H3AP68431 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC12.61□□□□□ -0.39
HIST1H3AP68431 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC12.61□□□□□ -0.39
HIST1H3AP68431 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
HIST1H3AP68431 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
HIST1H3AP68431 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
HIST1H3AP68431 CMTR2-201ENST00000338099 4869 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
HIST1H3AP68431 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
HIST1H3AP68431 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
HIST1H3AP68431 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC12.61□□□□□ -0.39
HIST1H3AP68431 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
HIST1H3AP68431 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
HIST1H3AP68431 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
HIST1H3AP68431 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
HIST1H3AP68431 PHLDB2-204ENST00000431670 6127 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
HIST1H3AP68431 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
HIST1H3AP68431 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC12.61□□□□□ -0.39
HIST1H3AP68431 FASN-201ENST00000306749 8565 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
HIST1H3AP68431 KIF6-201ENST00000229913 1330 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
HIST1H3AP68431 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC12.61□□□□□ -0.39
HIST1H3AP68431 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC12.61□□□□□ -0.39
HIST1H3AP68431 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC12.61□□□□□ -0.39
HIST1H3AP68431 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
HIST1H3AP68431 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC12.61□□□□□ -0.39
HIST1H3AP68431 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
HIST1H3AP68431 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
HIST1H3AP68431 RDX-218ENST00000544551 4117 ntTSL 2 BASIC12.6□□□□□ -0.39
HIST1H3AP68431 IRAK3-201ENST00000261233 8663 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
HIST1H3AP68431 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC12.6□□□□□ -0.39
HIST1H3AP68431 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
HIST1H3AP68431 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC12.6□□□□□ -0.39
HIST1H3AP68431 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
HIST1H3AP68431 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC12.6□□□□□ -0.39
HIST1H3AP68431 IL1RN-201ENST00000259206 1810 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
HIST1H3AP68431 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
HIST1H3AP68431 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
HIST1H3AP68431 AC007952.5-201ENST00000572818 1486 ntBASIC12.6□□□□□ -0.39
HIST1H3AP68431 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
HIST1H3AP68431 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms