Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 IL20RA-207ENST00000541547 3382 ntTSL 2 BASIC16.27■□□□□ 0.19
TPM4P67936 TBC1D24-201ENST00000293970 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.19
TPM4P67936 GRIA4-201ENST00000282499 5508 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
TPM4P67936 RGS9-201ENST00000262406 2375 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
TPM4P67936 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
TPM4P67936 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
TPM4P67936 MCC-201ENST00000302475 8257 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
TPM4P67936 GRIN1-204ENST00000371553 3751 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.19
TPM4P67936 ITGB2-208ENST00000397857 2813 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
TPM4P67936 AC114271.1-201ENST00000612689 2813 ntBASIC16.27■□□□□ 0.19
TPM4P67936 ARAP3-203ENST00000508305 4927 ntTSL 2 BASIC16.27■□□□□ 0.19
TPM4P67936 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
TPM4P67936 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
TPM4P67936 ARHGAP31-201ENST00000264245 9317 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
TPM4P67936 VPS52-212ENST00000445902 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TPM4P67936 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
TPM4P67936 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TPM4P67936 RFESD-201ENST00000311364 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TPM4P67936 LINC01725-203ENST00000417975 3177 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TPM4P67936 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC16.26■□□□□ 0.19
TPM4P67936 SLC9B2-202ENST00000394785 3126 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
TPM4P67936 UGT3A1-201ENST00000274278 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TPM4P67936 COASY-211ENST00000590958 1976 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TPM4P67936 AOC1-201ENST00000360937 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TPM4P67936 MKNK1-203ENST00000371945 2618 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
TPM4P67936 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TPM4P67936 LRRC41-208ENST00000617760 2158 ntTSL 5 BASIC16.26■□□□□ 0.19
TPM4P67936 ATP2C1-201ENST00000328560 3484 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TPM4P67936 AC239799.1-201ENST00000612520 3411 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
TPM4P67936 VPS9D1-202ENST00000561976 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
TPM4P67936 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TPM4P67936 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
TPM4P67936 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
TPM4P67936 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC16.26■□□□□ 0.19
TPM4P67936 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TPM4P67936 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC16.26■□□□□ 0.19
TPM4P67936 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC16.26■□□□□ 0.19
TPM4P67936 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC16.26■□□□□ 0.19
TPM4P67936 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC16.26■□□□□ 0.19
TPM4P67936 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC16.26■□□□□ 0.19
TPM4P67936 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC16.26■□□□□ 0.19
TPM4P67936 AL390754.1-201ENST00000619088 582 ntBASIC16.26■□□□□ 0.19
TPM4P67936 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
TPM4P67936 RAVER1-206ENST00000611074 3586 ntAPPRIS P2 TSL 5 BASIC16.26■□□□□ 0.19
TPM4P67936 NCAPG-201ENST00000251496 4661 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TPM4P67936 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TPM4P67936 IL1RN-201ENST00000259206 1810 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TPM4P67936 PPP1R3D-201ENST00000370996 3630 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
TPM4P67936 AL139193.2-201ENST00000553712 1954 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TPM4P67936 CREB3L4-204ENST00000368603 1557 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
TPM4P67936 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TPM4P67936 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
TPM4P67936 PI4KB-203ENST00000368874 3934 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TPM4P67936 GNAO1-214ENST00000638705 3529 ntAPPRIS P5 TSL 1 (best) BASIC16.25■□□□□ 0.19
TPM4P67936 MEG3-213ENST00000455531 4867 ntTSL 2 BASIC16.25■□□□□ 0.19
TPM4P67936 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC16.25■□□□□ 0.19
TPM4P67936 NCLN-201ENST00000246117 4005 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TPM4P67936 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TPM4P67936 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
TPM4P67936 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC16.25■□□□□ 0.19
TPM4P67936 DNM2-204ENST00000408974 3013 ntAPPRIS ALT1 TSL 2 BASIC16.25■□□□□ 0.19
TPM4P67936 NLRC3-202ENST00000359128 6401 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TPM4P67936 BCAR1-208ENST00000542031 2846 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
TPM4P67936 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TPM4P67936 FBXO32-203ENST00000517956 6744 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TPM4P67936 SLC22A20-202ENST00000525437 3196 ntTSL 5 BASIC16.25■□□□□ 0.19
TPM4P67936 GNAS-213ENST00000371099 3709 ntTSL 5 BASIC16.25■□□□□ 0.19
TPM4P67936 AL356258.1-201ENST00000605929 2246 ntTSL 2 BASIC16.25■□□□□ 0.19
TPM4P67936 SLC4A1-201ENST00000262418 4965 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TPM4P67936 INMT-201ENST00000013222 2559 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
TPM4P67936 SPATA20-227ENST00000634597 2587 ntAPPRIS ALT1 TSL 5 BASIC16.25■□□□□ 0.19
TPM4P67936 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TPM4P67936 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TPM4P67936 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TPM4P67936 SPDYE19P-201ENST00000338590 713 ntBASIC16.25■□□□□ 0.19
TPM4P67936 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
TPM4P67936 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TPM4P67936 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TPM4P67936 OSM-203ENST00000403463 464 ntTSL 3 BASIC16.25■□□□□ 0.19
TPM4P67936 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC16.25■□□□□ 0.19
TPM4P67936 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC16.25■□□□□ 0.19
TPM4P67936 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC16.25■□□□□ 0.19
TPM4P67936 AC124283.3-201ENST00000570869 594 ntBASIC16.25■□□□□ 0.19
TPM4P67936 AC004466.1-201ENST00000599515 1080 ntBASIC16.25■□□□□ 0.19
TPM4P67936 AC138696.2-201ENST00000607376 223 ntBASIC16.25■□□□□ 0.19
TPM4P67936 AC008761.3-201ENST00000624803 892 ntBASIC16.25■□□□□ 0.19
TPM4P67936 FLNA-203ENST00000369850 8382 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
TPM4P67936 COL6A1-207ENST00000612273 3251 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
TPM4P67936 GFAP-214ENST00000588735 6538 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TPM4P67936 NCLP1-201ENST00000445357 1963 ntBASIC16.25■□□□□ 0.19
TPM4P67936 HGNC:18790-201ENST00000397958 2650 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
TPM4P67936 AFDN-206ENST00000392112 7459 ntTSL 5 BASIC16.25■□□□□ 0.19
TPM4P67936 B4GALT6-201ENST00000237019 2128 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TPM4P67936 SRA1-201ENST00000336283 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TPM4P67936 ZFP36L2-201ENST00000282388 3696 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TPM4P67936 RHOH-224ENST00000622175 2254 ntAPPRIS P1 TSL 4 BASIC16.25■□□□□ 0.19
TPM4P67936 AL590440.2-201ENST00000641973 1595 ntBASIC16.25■□□□□ 0.19
TPM4P67936 WDR73-202ENST00000434634 5387 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TPM4P67936 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TPM4P67936 NFE2L1-218ENST00000583378 2051 ntTSL 5 BASIC16.25■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms