Protein–RNA interactions for Protein: P62491

RAB11A, Ras-related protein Rab-11A, humanhuman

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11AP62491 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC11.83□□□□□ -0.51
RAB11AP62491 SPATA20-227ENST00000634597 2587 ntAPPRIS ALT1 TSL 5 BASIC11.83□□□□□ -0.52
RAB11AP62491 ITGA5-201ENST00000293379 4444 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
RAB11AP62491 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC11.83□□□□□ -0.52
RAB11AP62491 DFFA-202ENST00000377038 6032 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
RAB11AP62491 AL139193.2-201ENST00000553712 1954 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
RAB11AP62491 BRPF3-201ENST00000339717 4820 ntTSL 5 BASIC11.83□□□□□ -0.52
RAB11AP62491 DHX34-201ENST00000328771 4372 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
RAB11AP62491 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC11.83□□□□□ -0.52
RAB11AP62491 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
RAB11AP62491 AC015688.4-201ENST00000580780 1647 ntBASIC11.83□□□□□ -0.52
RAB11AP62491 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC11.83□□□□□ -0.52
RAB11AP62491 CPLX2-201ENST00000359546 5023 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
RAB11AP62491 ACTG1-206ENST00000573283 2002 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
RAB11AP62491 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC11.83□□□□□ -0.52
RAB11AP62491 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC11.83□□□□□ -0.52
RAB11AP62491 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
RAB11AP62491 FUT8-202ENST00000358307 2664 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
RAB11AP62491 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
RAB11AP62491 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC11.83□□□□□ -0.52
RAB11AP62491 BRF1-202ENST00000379932 884 ntTSL 5 BASIC11.83□□□□□ -0.52
RAB11AP62491 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC11.83□□□□□ -0.52
RAB11AP62491 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
RAB11AP62491 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC11.83□□□□□ -0.52
RAB11AP62491 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
RAB11AP62491 DHDH-204ENST00000523250 634 ntTSL 5 BASIC11.83□□□□□ -0.52
RAB11AP62491 RARRES2P5-201ENST00000564013 466 ntBASIC11.83□□□□□ -0.52
RAB11AP62491 AC004449.1-201ENST00000564240 433 ntBASIC11.83□□□□□ -0.52
RAB11AP62491 AL158211.3-201ENST00000607385 239 ntBASIC11.83□□□□□ -0.52
RAB11AP62491 AL844908.2-201ENST00000609461 460 ntBASIC11.83□□□□□ -0.52
RAB11AP62491 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
RAB11AP62491 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC11.83□□□□□ -0.52
RAB11AP62491 CSNK1G3-201ENST00000345990 4635 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
RAB11AP62491 INMT-201ENST00000013222 2559 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
RAB11AP62491 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
RAB11AP62491 SOGA3-207ENST00000481848 11464 ntAPPRIS P5 TSL 5 BASIC11.83□□□□□ -0.52
RAB11AP62491 CCDC126-202ENST00000409765 2324 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
RAB11AP62491 ANKRD36B-204ENST00000438709 6067 ntTSL 5 BASIC11.83□□□□□ -0.52
RAB11AP62491 C5AR2-201ENST00000595464 6746 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
RAB11AP62491 ADAMTSL4-201ENST00000271643 4250 ntAPPRIS P3 TSL 5 BASIC11.83□□□□□ -0.52
RAB11AP62491 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
RAB11AP62491 GATA2-201ENST00000341105 3367 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
RAB11AP62491 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC11.83□□□□□ -0.52
RAB11AP62491 LINC01341-202ENST00000421003 2600 ntTSL 2 BASIC11.83□□□□□ -0.52
RAB11AP62491 POU5F2-201ENST00000606183 8418 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
RAB11AP62491 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC11.83□□□□□ -0.52
RAB11AP62491 TMEM25-204ENST00000359862 2395 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
RAB11AP62491 CILP-201ENST00000261883 5695 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
RAB11AP62491 MRVI1-202ENST00000424001 5815 ntTSL 5 BASIC11.83□□□□□ -0.52
RAB11AP62491 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
RAB11AP62491 TMEM260-201ENST00000261556 4264 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
RAB11AP62491 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
RAB11AP62491 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
RAB11AP62491 NUTM2E-202ENST00000602967 3623 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
RAB11AP62491 WARS2-201ENST00000235521 2800 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
RAB11AP62491 SFI1-208ENST00000432498 4162 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
RAB11AP62491 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
RAB11AP62491 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC11.82□□□□□ -0.52
RAB11AP62491 ABCA3-202ENST00000382381 6446 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
RAB11AP62491 SPATA7-217ENST00000556553 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
RAB11AP62491 PGBD2-202ENST00000355360 2879 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
RAB11AP62491 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
RAB11AP62491 RGS12-202ENST00000338806 3010 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
RAB11AP62491 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
RAB11AP62491 BRSK2-202ENST00000382179 3576 ntTSL 2 BASIC11.82□□□□□ -0.52
RAB11AP62491 FMNL3-205ENST00000550488 4120 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
RAB11AP62491 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
RAB11AP62491 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
RAB11AP62491 AC016582.3-202ENST00000443870 6580 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
RAB11AP62491 BRD1-201ENST00000216267 4614 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
RAB11AP62491 AC068075.1-201ENST00000519714 1832 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
RAB11AP62491 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC11.82□□□□□ -0.52
RAB11AP62491 CADM1-204ENST00000536727 3520 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
RAB11AP62491 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
RAB11AP62491 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
RAB11AP62491 MYT1-201ENST00000328439 5535 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
RAB11AP62491 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
RAB11AP62491 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
RAB11AP62491 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
RAB11AP62491 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
RAB11AP62491 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
RAB11AP62491 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC11.82□□□□□ -0.52
RAB11AP62491 WRB-204ENST00000398753 699 ntTSL 3 BASIC11.82□□□□□ -0.52
RAB11AP62491 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC11.82□□□□□ -0.52
RAB11AP62491 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC11.82□□□□□ -0.52
RAB11AP62491 AC114812.1-204ENST00000449669 728 ntBASIC11.82□□□□□ -0.52
RAB11AP62491 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
RAB11AP62491 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC11.82□□□□□ -0.52
RAB11AP62491 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC11.82□□□□□ -0.52
RAB11AP62491 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC11.82□□□□□ -0.52
RAB11AP62491 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC11.82□□□□□ -0.52
RAB11AP62491 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
RAB11AP62491 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC11.82□□□□□ -0.52
RAB11AP62491 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC11.82□□□□□ -0.52
RAB11AP62491 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
RAB11AP62491 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC11.82□□□□□ -0.52
RAB11AP62491 AC007431.3-201ENST00000623221 587 ntBASIC11.82□□□□□ -0.52
RAB11AP62491 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC11.82□□□□□ -0.52
RAB11AP62491 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
RAB11AP62491 LARGE1-203ENST00000402320 3955 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 70.4 ms