Protein–RNA interactions for Protein: P61247

RPS3A, 40S ribosomal protein S3a, humanhuman

Known RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3AP61247 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC13.67□□□□□ -0.22
RPS3AP61247 MYLK-208ENST00000475616 5745 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
RPS3AP61247 SELENON-202ENST00000361547 4334 ntAPPRIS P4 TSL 1 (best) BASIC13.67□□□□□ -0.22
RPS3AP61247 PDIA3P1-201ENST00000471856 1510 ntBASIC13.67□□□□□ -0.22
RPS3AP61247 AC055811.4-201ENST00000624039 1754 ntBASIC13.67□□□□□ -0.22
RPS3AP61247 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RPS3AP61247 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
RPS3AP61247 MYOM3-202ENST00000374434 5804 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RPS3AP61247 POLM-201ENST00000242248 2631 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RPS3AP61247 BAIAP2-202ENST00000321300 2879 ntAPPRIS P4 TSL 1 (best) BASIC13.67□□□□□ -0.22
RPS3AP61247 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC13.67□□□□□ -0.22
RPS3AP61247 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC13.67□□□□□ -0.22
RPS3AP61247 ABCA2-203ENST00000371605 8151 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
RPS3AP61247 BAK1-203ENST00000442998 2212 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
RPS3AP61247 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC13.67□□□□□ -0.22
RPS3AP61247 ASH2L-201ENST00000343823 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RPS3AP61247 TRMT2B-203ENST00000372939 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
RPS3AP61247 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
RPS3AP61247 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RPS3AP61247 TRIM80P-201ENST00000455685 2848 ntBASIC13.67□□□□□ -0.22
RPS3AP61247 C7orf65-201ENST00000408988 2911 ntTSL 2 BASIC13.67□□□□□ -0.22
RPS3AP61247 MSH5-202ENST00000375740 2669 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
RPS3AP61247 JUN-201ENST00000371222 3540 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
RPS3AP61247 GET4-202ENST00000407192 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
RPS3AP61247 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
RPS3AP61247 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RPS3AP61247 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
RPS3AP61247 RIOK3-203ENST00000577501 1904 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RPS3AP61247 ZDHHC8-203ENST00000405930 3112 ntTSL 2 BASIC13.66□□□□□ -0.22
RPS3AP61247 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
RPS3AP61247 ARHGEF4-217ENST00000611048 3486 ntTSL 5 BASIC13.66□□□□□ -0.22
RPS3AP61247 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC13.66□□□□□ -0.22
RPS3AP61247 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC13.66□□□□□ -0.22
RPS3AP61247 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
RPS3AP61247 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
RPS3AP61247 RRAGD-201ENST00000359203 4042 ntTSL 2 BASIC13.66□□□□□ -0.22
RPS3AP61247 KCNMA1-287ENST00000640632 2808 ntTSL 2 BASIC13.66□□□□□ -0.22
RPS3AP61247 IL20RA-203ENST00000367748 3522 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
RPS3AP61247 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RPS3AP61247 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC13.66□□□□□ -0.22
RPS3AP61247 PPME1-201ENST00000328257 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RPS3AP61247 TPM3P8-201ENST00000330554 643 ntBASIC13.66□□□□□ -0.22
RPS3AP61247 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
RPS3AP61247 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
RPS3AP61247 LSM5-207ENST00000410044 687 ntTSL 3 BASIC13.66□□□□□ -0.22
RPS3AP61247 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC13.66□□□□□ -0.22
RPS3AP61247 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RPS3AP61247 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC13.66□□□□□ -0.22
RPS3AP61247 RPL7P3-201ENST00000441388 714 ntBASIC13.66□□□□□ -0.22
RPS3AP61247 KRT223P-202ENST00000449164 1292 ntBASIC13.66□□□□□ -0.22
RPS3AP61247 AC022210.1-201ENST00000449856 793 ntBASIC13.66□□□□□ -0.22
RPS3AP61247 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC13.66□□□□□ -0.22
RPS3AP61247 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC13.66□□□□□ -0.22
RPS3AP61247 RPL8-205ENST00000527914 551 ntTSL 3 BASIC13.66□□□□□ -0.22
RPS3AP61247 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC13.66□□□□□ -0.22
RPS3AP61247 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
RPS3AP61247 RN7SL48P-201ENST00000579283 293 ntBASIC13.66□□□□□ -0.22
RPS3AP61247 RHOXF1P1-202ENST00000635473 501 ntBASIC13.66□□□□□ -0.22
RPS3AP61247 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RPS3AP61247 CCT8L2-201ENST00000359963 2060 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
RPS3AP61247 DTX3L-201ENST00000296161 5868 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RPS3AP61247 TFIP11-201ENST00000405938 2896 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
RPS3AP61247 COL6A1-201ENST00000361866 4238 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
RPS3AP61247 HNF1A-201ENST00000257555 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RPS3AP61247 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
RPS3AP61247 CENPBD1-201ENST00000314994 2744 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
RPS3AP61247 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC13.66□□□□□ -0.22
RPS3AP61247 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RPS3AP61247 SCML4-203ENST00000369022 2377 ntTSL 2 BASIC13.66□□□□□ -0.22
RPS3AP61247 FSTL4-201ENST00000265342 5419 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
RPS3AP61247 SMC5-201ENST00000361138 5980 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RPS3AP61247 ATG14-201ENST00000247178 4742 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RPS3AP61247 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
RPS3AP61247 MBP-208ENST00000397866 2145 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RPS3AP61247 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
RPS3AP61247 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RPS3AP61247 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
RPS3AP61247 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
RPS3AP61247 GUF1-201ENST00000281543 4449 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
RPS3AP61247 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
RPS3AP61247 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
RPS3AP61247 SYNE3-201ENST00000334258 3275 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
RPS3AP61247 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
RPS3AP61247 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
RPS3AP61247 PSIP1-203ENST00000380733 3391 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
RPS3AP61247 UQCRFS1-201ENST00000304863 3475 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
RPS3AP61247 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
RPS3AP61247 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
RPS3AP61247 PCTP-207ENST00000576183 2680 ntTSL 3 BASIC13.65□□□□□ -0.22
RPS3AP61247 BUB1B-PAK6-201ENST00000441369 2767 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
RPS3AP61247 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
RPS3AP61247 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
RPS3AP61247 MIR1909-201ENST00000411312 80 ntBASIC13.65□□□□□ -0.22
RPS3AP61247 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
RPS3AP61247 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
RPS3AP61247 FAM189A2-204ENST00000455972 2107 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
RPS3AP61247 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC13.65□□□□□ -0.22
RPS3AP61247 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC13.65□□□□□ -0.22
RPS3AP61247 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
RPS3AP61247 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC13.65□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms