Protein–RNA interactions for Protein: P61073

CXCR4, C-X-C chemokine receptor type 4, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4P61073 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CXCR4P61073 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC13.2□□□□□ -0.3
CXCR4P61073 BAIAP3-201ENST00000324385 4678 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
CXCR4P61073 PARVB-201ENST00000338758 5429 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CXCR4P61073 FAM212B-AS1-201ENST00000430373 2131 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CXCR4P61073 AL445209.1-201ENST00000607269 3491 ntBASIC13.19□□□□□ -0.3
CXCR4P61073 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CXCR4P61073 PPP1R1B-203ENST00000394267 1504 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CXCR4P61073 DEK-202ENST00000397239 3427 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CXCR4P61073 KIFC3-211ENST00000562903 3221 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CXCR4P61073 CASKIN2-202ENST00000433559 3950 ntTSL 2 BASIC13.19□□□□□ -0.3
CXCR4P61073 IL11RA-208ENST00000555003 3008 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
CXCR4P61073 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CXCR4P61073 OR2V1-204ENST00000641551 2423 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
CXCR4P61073 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CXCR4P61073 F10-203ENST00000409306 1450 ntTSL 3 BASIC13.19□□□□□ -0.3
CXCR4P61073 RHD-209ENST00000568195 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
CXCR4P61073 SATB2-211ENST00000614512 4972 ntTSL 5 BASIC13.19□□□□□ -0.3
CXCR4P61073 SLC5A4-201ENST00000266086 2030 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CXCR4P61073 COPS7B-203ENST00000373608 2563 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CXCR4P61073 SPTSSB-201ENST00000359175 3103 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CXCR4P61073 GOLGA2P5-201ENST00000266746 2395 ntBASIC13.19□□□□□ -0.3
CXCR4P61073 RPF1-202ENST00000370656 724 ntTSL 2 BASIC13.19□□□□□ -0.3
CXCR4P61073 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC13.19□□□□□ -0.3
CXCR4P61073 AC134915.1-201ENST00000426461 574 ntBASIC13.19□□□□□ -0.3
CXCR4P61073 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC13.19□□□□□ -0.3
CXCR4P61073 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC13.19□□□□□ -0.3
CXCR4P61073 AC114812.1-204ENST00000449669 728 ntBASIC13.19□□□□□ -0.3
CXCR4P61073 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CXCR4P61073 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC13.19□□□□□ -0.3
CXCR4P61073 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC13.19□□□□□ -0.3
CXCR4P61073 AP001582.1-201ENST00000525856 295 ntBASIC13.19□□□□□ -0.3
CXCR4P61073 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC13.19□□□□□ -0.3
CXCR4P61073 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CXCR4P61073 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC13.19□□□□□ -0.3
CXCR4P61073 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC13.19□□□□□ -0.3
CXCR4P61073 AC120045.2-201ENST00000567334 178 ntBASIC13.19□□□□□ -0.3
CXCR4P61073 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC13.19□□□□□ -0.3
CXCR4P61073 PLAT-201ENST00000220809 2706 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CXCR4P61073 GLB1L-201ENST00000295759 2745 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CXCR4P61073 PTPN6-202ENST00000399448 2159 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
CXCR4P61073 AC060814.4-201ENST00000594169 2163 ntBASIC13.19□□□□□ -0.3
CXCR4P61073 NADK-202ENST00000341991 3098 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
CXCR4P61073 FAM230C-201ENST00000623511 1970 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CXCR4P61073 TJAP1-204ENST00000372449 2695 ntTSL 5 BASIC13.19□□□□□ -0.3
CXCR4P61073 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CXCR4P61073 RPA2-203ENST00000373912 1752 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CXCR4P61073 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC13.19□□□□□ -0.3
CXCR4P61073 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
CXCR4P61073 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CXCR4P61073 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
CXCR4P61073 ELN-222ENST00000458204 3147 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
CXCR4P61073 DHTKD1-201ENST00000263035 5159 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CXCR4P61073 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CXCR4P61073 YWHAQ-202ENST00000381844 2216 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CXCR4P61073 DHCR24-201ENST00000371269 4250 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CXCR4P61073 CDK20-209ENST00000605159 1860 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CXCR4P61073 LINC01833-203ENST00000437916 2880 ntTSL 3 BASIC13.18□□□□□ -0.3
CXCR4P61073 IFT81-202ENST00000361948 3048 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CXCR4P61073 PEG13-201ENST00000631594 5667 ntBASIC13.18□□□□□ -0.3
CXCR4P61073 TRIM26-267ENST00000453195 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CXCR4P61073 ADPRHL1-204ENST00000612156 9759 ntTSL 5 BASIC13.18□□□□□ -0.3
CXCR4P61073 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
CXCR4P61073 AP2M1-207ENST00000439647 1950 ntAPPRIS ALT1 TSL 2 BASIC13.18□□□□□ -0.3
CXCR4P61073 SERPINB1-201ENST00000380739 2619 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CXCR4P61073 SIGLEC12-201ENST00000291707 2121 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CXCR4P61073 RERG-204ENST00000536465 2134 ntAPPRIS P1 TSL 3 BASIC13.18□□□□□ -0.3
CXCR4P61073 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CXCR4P61073 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CXCR4P61073 GTF2IRD2B-203ENST00000472837 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CXCR4P61073 SMPDL3B-206ENST00000549094 1611 ntTSL 5 BASIC13.18□□□□□ -0.3
CXCR4P61073 ERAL1-201ENST00000254928 1925 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CXCR4P61073 COX6B2-210ENST00000593184 2083 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
CXCR4P61073 EFHC1-230ENST00000637263 2089 ntTSL 5 BASIC13.18□□□□□ -0.3
CXCR4P61073 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CXCR4P61073 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CXCR4P61073 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
CXCR4P61073 AC005586.2-201ENST00000563946 837 ntBASIC13.18□□□□□ -0.3
CXCR4P61073 ZNF843-202ENST00000564218 3816 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
CXCR4P61073 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC13.18□□□□□ -0.3
CXCR4P61073 RNA5-8SN1-201ENST00000610460 153 ntBASIC13.18□□□□□ -0.3
CXCR4P61073 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC13.18□□□□□ -0.3
CXCR4P61073 RNA5-8SN5-202ENST00000612463 153 ntBASIC13.18□□□□□ -0.3
CXCR4P61073 RNA5-8SN4-201ENST00000613359 153 ntBASIC13.18□□□□□ -0.3
CXCR4P61073 RNA5-8SN5-201ENST00000619471 153 ntBASIC13.18□□□□□ -0.3
CXCR4P61073 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CXCR4P61073 BAK1-203ENST00000442998 2212 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CXCR4P61073 TASP1-201ENST00000337743 2352 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CXCR4P61073 ERVK13-1-207ENST00000569465 3321 ntTSL 2 BASIC13.18□□□□□ -0.3
CXCR4P61073 AC000120.1-201ENST00000414227 1589 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CXCR4P61073 FHOD3-206ENST00000590592 4869 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
CXCR4P61073 OR2A25-202ENST00000641441 1733 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
CXCR4P61073 USP2-201ENST00000260187 3732 ntAPPRIS P4 TSL 1 (best) BASIC13.18□□□□□ -0.3
CXCR4P61073 SLC26A6-202ENST00000337000 2317 ntTSL 2 BASIC13.18□□□□□ -0.3
CXCR4P61073 MED16-202ENST00000312090 3229 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
CXCR4P61073 AMT-232ENST00000636199 1546 ntTSL 5 BASIC13.18□□□□□ -0.3
CXCR4P61073 PCID2-205ENST00000375477 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CXCR4P61073 HTR3A-201ENST00000299961 1994 ntTSL 2 BASIC13.18□□□□□ -0.3
CXCR4P61073 LINC00511-213ENST00000581549 2265 ntTSL 2 BASIC13.18□□□□□ -0.3
CXCR4P61073 CD276-202ENST00000318443 3469 ntAPPRIS P2 TSL 2 BASIC13.18□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 65.7 ms