Protein–RNA interactions for Protein: P55286

CDH8, Cadherin-8, humanhuman

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8P55286 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CDH8P55286 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CDH8P55286 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CDH8P55286 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC15.36■□□□□ 0.05
CDH8P55286 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CDH8P55286 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC15.36■□□□□ 0.05
CDH8P55286 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CDH8P55286 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CDH8P55286 MIR769-201ENST00000390225 118 ntBASIC15.36■□□□□ 0.05
CDH8P55286 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CDH8P55286 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC15.36■□□□□ 0.05
CDH8P55286 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC15.36■□□□□ 0.05
CDH8P55286 NBPF3-205ENST00000454000 2133 ntAPPRIS ALT2 TSL 2 BASIC15.36■□□□□ 0.05
CDH8P55286 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC15.36■□□□□ 0.05
CDH8P55286 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC15.36■□□□□ 0.05
CDH8P55286 AC140658.4-201ENST00000561990 352 ntBASIC15.36■□□□□ 0.05
CDH8P55286 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CDH8P55286 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CDH8P55286 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC15.36■□□□□ 0.05
CDH8P55286 KLK3-207ENST00000595952 969 ntTSL 3 BASIC15.36■□□□□ 0.05
CDH8P55286 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC15.36■□□□□ 0.05
CDH8P55286 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
CDH8P55286 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CDH8P55286 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC15.36■□□□□ 0.05
CDH8P55286 HYOU1-219ENST00000614711 3057 ntTSL 5 BASIC15.36■□□□□ 0.05
CDH8P55286 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CDH8P55286 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC15.36■□□□□ 0.05
CDH8P55286 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC15.36■□□□□ 0.05
CDH8P55286 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
CDH8P55286 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
CDH8P55286 AC015909.3-201ENST00000572855 1794 ntBASIC15.36■□□□□ 0.05
CDH8P55286 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CDH8P55286 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CDH8P55286 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CDH8P55286 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CDH8P55286 FUK-202ENST00000378912 3925 ntTSL 2 BASIC15.36■□□□□ 0.05
CDH8P55286 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC15.35■□□□□ 0.05
CDH8P55286 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC15.35■□□□□ 0.05
CDH8P55286 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CDH8P55286 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
CDH8P55286 CD1E-206ENST00000368161 1689 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CDH8P55286 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CDH8P55286 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
CDH8P55286 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
CDH8P55286 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CDH8P55286 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CDH8P55286 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
CDH8P55286 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CDH8P55286 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC15.35■□□□□ 0.05
CDH8P55286 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CDH8P55286 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC15.35■□□□□ 0.05
CDH8P55286 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CDH8P55286 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CDH8P55286 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CDH8P55286 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
CDH8P55286 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
CDH8P55286 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CDH8P55286 AL008707.1-201ENST00000422498 534 ntBASIC15.35■□□□□ 0.05
CDH8P55286 ISCA2P1-201ENST00000425548 448 ntBASIC15.35■□□□□ 0.05
CDH8P55286 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC15.35■□□□□ 0.05
CDH8P55286 AL596276.2-201ENST00000447525 331 ntBASIC15.35■□□□□ 0.05
CDH8P55286 AC012618.1-201ENST00000461223 412 ntBASIC15.35■□□□□ 0.05
CDH8P55286 CD164-210ENST00000512821 964 ntTSL 2 BASIC15.35■□□□□ 0.05
CDH8P55286 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC15.35■□□□□ 0.05
CDH8P55286 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC15.35■□□□□ 0.05
CDH8P55286 AC145207.3-201ENST00000576784 529 ntTSL 5 BASIC15.35■□□□□ 0.05
CDH8P55286 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC15.35■□□□□ 0.05
CDH8P55286 MEG3_2.1-201ENST00000611456 105 ntBASIC15.35■□□□□ 0.05
CDH8P55286 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CDH8P55286 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC15.35■□□□□ 0.05
CDH8P55286 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
CDH8P55286 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CDH8P55286 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CDH8P55286 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CDH8P55286 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CDH8P55286 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC15.35■□□□□ 0.05
CDH8P55286 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CDH8P55286 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
CDH8P55286 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CDH8P55286 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CDH8P55286 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
CDH8P55286 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CDH8P55286 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC15.35■□□□□ 0.05
CDH8P55286 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CDH8P55286 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CDH8P55286 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC15.34■□□□□ 0.05
CDH8P55286 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC15.34■□□□□ 0.05
CDH8P55286 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
CDH8P55286 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC15.34■□□□□ 0.05
CDH8P55286 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
CDH8P55286 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CDH8P55286 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CDH8P55286 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
CDH8P55286 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CDH8P55286 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC15.34■□□□□ 0.05
CDH8P55286 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
CDH8P55286 EFHC1-227ENST00000637089 2133 ntTSL 5 BASIC15.34■□□□□ 0.05
CDH8P55286 HPGD-209ENST00000510901 1535 ntTSL 2 BASIC15.34■□□□□ 0.05
CDH8P55286 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC15.34■□□□□ 0.05
CDH8P55286 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms