Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
CDH4P55283 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CDH4P55283 PLSCR1-214ENST00000487389 1443 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
CDH4P55283 SCGN-203ENST00000612225 1402 ntTSL 5 BASIC14.7□□□□□ -0.06
CDH4P55283 MRPL32-201ENST00000223324 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CDH4P55283 BORCS5-201ENST00000298571 549 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CDH4P55283 C19orf18-201ENST00000314391 915 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CDH4P55283 PRIMA1-201ENST00000316227 1080 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CDH4P55283 FUNDC2P2-201ENST00000331369 1223 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CDH4P55283 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
CDH4P55283 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CDH4P55283 AL645608.5-201ENST00000398216 443 ntTSL 3 BASIC14.7□□□□□ -0.06
CDH4P55283 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC14.7□□□□□ -0.06
CDH4P55283 BANF1P3-201ENST00000412556 261 ntBASIC14.7□□□□□ -0.06
CDH4P55283 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC14.7□□□□□ -0.06
CDH4P55283 PTPA-217ENST00000434095 870 ntTSL 2 BASIC14.7□□□□□ -0.06
CDH4P55283 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC14.7□□□□□ -0.06
CDH4P55283 KRT18P15-201ENST00000458108 1291 ntBASIC14.7□□□□□ -0.06
CDH4P55283 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC14.7□□□□□ -0.06
CDH4P55283 AC008723.1-201ENST00000506922 207 ntBASIC14.7□□□□□ -0.06
CDH4P55283 KRT8P1-201ENST00000557533 1207 ntBASIC14.7□□□□□ -0.06
CDH4P55283 AC242376.1-201ENST00000559033 726 ntBASIC14.7□□□□□ -0.06
CDH4P55283 SNHG21-204ENST00000559366 674 ntTSL 2 BASIC14.7□□□□□ -0.06
CDH4P55283 STUB1-204ENST00000564370 875 ntTSL 2 BASIC14.7□□□□□ -0.06
CDH4P55283 AC040162.4-201ENST00000574912 1185 ntAPPRIS P1 TSL 3 BASIC14.7□□□□□ -0.06
CDH4P55283 AC011466.3-201ENST00000596563 852 ntTSL 2 BASIC14.7□□□□□ -0.06
CDH4P55283 TLDC2-203ENST00000602922 1179 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CDH4P55283 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CDH4P55283 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC14.7□□□□□ -0.06
CDH4P55283 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC14.7□□□□□ -0.06
CDH4P55283 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC14.7□□□□□ -0.06
CDH4P55283 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
CDH4P55283 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC14.7□□□□□ -0.06
CDH4P55283 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
CDH4P55283 ALG3-205ENST00000445626 1533 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CDH4P55283 TCAM1P-207ENST00000485295 1537 ntBASIC14.7□□□□□ -0.06
CDH4P55283 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
CDH4P55283 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
CDH4P55283 GOLGA8VP-201ENST00000559009 1798 ntBASIC14.7□□□□□ -0.06
CDH4P55283 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CDH4P55283 ABR-205ENST00000544583 5595 ntTSL 2 BASIC14.7□□□□□ -0.06
CDH4P55283 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CDH4P55283 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CDH4P55283 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC14.7□□□□□ -0.06
CDH4P55283 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CDH4P55283 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CDH4P55283 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CDH4P55283 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC14.69□□□□□ -0.06
CDH4P55283 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
CDH4P55283 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
CDH4P55283 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
CDH4P55283 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC14.69□□□□□ -0.06
CDH4P55283 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
CDH4P55283 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
CDH4P55283 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
CDH4P55283 BRD7P5-201ENST00000299197 1822 ntBASIC14.69□□□□□ -0.06
CDH4P55283 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC14.69□□□□□ -0.06
CDH4P55283 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CDH4P55283 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CDH4P55283 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CDH4P55283 LINC01815-202ENST00000641468 1409 ntBASIC14.69□□□□□ -0.06
CDH4P55283 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
CDH4P55283 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CDH4P55283 CELA3B-201ENST00000337107 897 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CDH4P55283 NUP210P1-201ENST00000357061 876 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CDH4P55283 PSMB5-202ENST00000361611 1294 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CDH4P55283 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CDH4P55283 AC007274.2-201ENST00000421675 662 ntBASIC14.69□□□□□ -0.06
CDH4P55283 PSMB5-203ENST00000425762 900 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CDH4P55283 LINC00313-205ENST00000427188 967 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CDH4P55283 AC026320.2-201ENST00000434379 478 ntBASIC14.69□□□□□ -0.06
CDH4P55283 RAMP3-202ENST00000481345 559 ntAPPRIS P2 TSL 4 BASIC14.69□□□□□ -0.06
CDH4P55283 RN7SL720P-201ENST00000488178 304 ntBASIC14.69□□□□□ -0.06
CDH4P55283 AC116345.2-201ENST00000512837 523 ntBASIC14.69□□□□□ -0.06
CDH4P55283 RTN3P1-201ENST00000536295 711 ntBASIC14.69□□□□□ -0.06
CDH4P55283 NME1-NME2-203ENST00000555572 1193 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
CDH4P55283 MAX-218ENST00000557746 571 ntTSL 4 BASIC14.69□□□□□ -0.06
CDH4P55283 AC026803.1-201ENST00000569130 274 ntBASIC14.69□□□□□ -0.06
CDH4P55283 PHBP15-201ENST00000574228 665 ntBASIC14.69□□□□□ -0.06
CDH4P55283 AL109837.1-201ENST00000603272 613 ntBASIC14.69□□□□□ -0.06
CDH4P55283 ASNA1-205ENST00000611688 1214 ntTSL 5 BASIC14.69□□□□□ -0.06
CDH4P55283 AF254983.2-201ENST00000612331 135 ntBASIC14.69□□□□□ -0.06
CDH4P55283 ROPN1-211ENST00000620893 1006 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CDH4P55283 SNX12-206ENST00000622259 661 ntTSL 5 BASIC14.69□□□□□ -0.06
CDH4P55283 MBD3L2B-201ENST00000636986 860 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CDH4P55283 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
CDH4P55283 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC14.69□□□□□ -0.06
CDH4P55283 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CDH4P55283 GABRB2-205ENST00000517901 1779 ntTSL 5 BASIC14.69□□□□□ -0.06
CDH4P55283 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC14.69□□□□□ -0.06
CDH4P55283 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CDH4P55283 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC14.69□□□□□ -0.06
CDH4P55283 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
CDH4P55283 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
CDH4P55283 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CDH4P55283 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC14.69□□□□□ -0.06
CDH4P55283 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC14.69□□□□□ -0.06
CDH4P55283 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC14.69□□□□□ -0.06
CDH4P55283 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
CDH4P55283 MTMR9-202ENST00000526292 1960 ntTSL 2 BASIC14.69□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 71.6 ms