Protein–RNA interactions for Protein: P51571

SSR4, Translocon-associated protein subunit delta, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4P51571 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
SSR4P51571 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC13.21□□□□□ -0.29
SSR4P51571 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
SSR4P51571 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
SSR4P51571 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
SSR4P51571 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
SSR4P51571 DPCD-202ENST00000370151 858 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
SSR4P51571 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
SSR4P51571 GSTP1-201ENST00000398603 700 ntTSL 3 BASIC13.21□□□□□ -0.29
SSR4P51571 RHBDD2-203ENST00000428119 1274 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
SSR4P51571 RPL8P2-201ENST00000430538 502 ntBASIC13.21□□□□□ -0.29
SSR4P51571 AL590617.2-201ENST00000432673 917 ntTSL 3 BASIC13.21□□□□□ -0.29
SSR4P51571 HCFC1-AS1-201ENST00000438219 350 ntTSL 3 BASIC13.21□□□□□ -0.29
SSR4P51571 BMS1P17-203ENST00000444357 552 ntTSL 4 BASIC13.21□□□□□ -0.29
SSR4P51571 EEF1DP6-201ENST00000449232 372 ntBASIC13.21□□□□□ -0.29
SSR4P51571 CEP164P1-201ENST00000455142 418 ntBASIC13.21□□□□□ -0.29
SSR4P51571 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC13.21□□□□□ -0.29
SSR4P51571 PRKRA-211ENST00000487082 1211 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
SSR4P51571 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC13.21□□□□□ -0.29
SSR4P51571 LINC02417-201ENST00000542449 515 ntTSL 2 BASIC13.21□□□□□ -0.29
SSR4P51571 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC13.21□□□□□ -0.29
SSR4P51571 KRT8P1-201ENST00000557533 1207 ntBASIC13.21□□□□□ -0.29
SSR4P51571 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.29
SSR4P51571 BMS1P22-203ENST00000609679 552 ntTSL 4 BASIC13.21□□□□□ -0.29
SSR4P51571 PRKAB1-210ENST00000630317 258 ntTSL 2 BASIC13.21□□□□□ -0.29
SSR4P51571 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
SSR4P51571 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
SSR4P51571 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
SSR4P51571 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC13.21□□□□□ -0.29
SSR4P51571 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
SSR4P51571 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
SSR4P51571 DISC1-222ENST00000622252 6927 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
SSR4P51571 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC13.21□□□□□ -0.3
SSR4P51571 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.3
SSR4P51571 JMJD6-203ENST00000445478 5303 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
SSR4P51571 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
SSR4P51571 CCT8L1P-201ENST00000465400 1674 ntBASIC13.21□□□□□ -0.3
SSR4P51571 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
SSR4P51571 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC13.21□□□□□ -0.3
SSR4P51571 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.3
SSR4P51571 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC13.21□□□□□ -0.3
SSR4P51571 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
SSR4P51571 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
SSR4P51571 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC13.21□□□□□ -0.3
SSR4P51571 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
SSR4P51571 TMEM144-209ENST00000509278 1633 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
SSR4P51571 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC13.21□□□□□ -0.3
SSR4P51571 FUK-202ENST00000378912 3925 ntTSL 2 BASIC13.2□□□□□ -0.3
SSR4P51571 COLEC11-201ENST00000236693 1381 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
SSR4P51571 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC13.2□□□□□ -0.3
SSR4P51571 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
SSR4P51571 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
SSR4P51571 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
SSR4P51571 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC13.2□□□□□ -0.3
SSR4P51571 AC138969.2-201ENST00000532739 9932 ntBASIC13.2□□□□□ -0.3
SSR4P51571 OSTF1-201ENST00000346234 1319 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SSR4P51571 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
SSR4P51571 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SSR4P51571 HPGD-209ENST00000510901 1535 ntTSL 2 BASIC13.2□□□□□ -0.3
SSR4P51571 RDX-218ENST00000544551 4117 ntTSL 2 BASIC13.2□□□□□ -0.3
SSR4P51571 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SSR4P51571 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
SSR4P51571 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SSR4P51571 HFE-201ENST00000309234 1158 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
SSR4P51571 KRT17P5-201ENST00000332088 839 ntBASIC13.2□□□□□ -0.3
SSR4P51571 UBL4A-201ENST00000369653 711 ntTSL 3 BASIC13.2□□□□□ -0.3
SSR4P51571 OR2K2-202ENST00000374428 1038 ntBASIC13.2□□□□□ -0.3
SSR4P51571 AL583805.1-201ENST00000391389 531 ntBASIC13.2□□□□□ -0.3
SSR4P51571 CALCA-203ENST00000396372 581 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
SSR4P51571 AC073316.1-202ENST00000402115 988 ntTSL 5 BASIC13.2□□□□□ -0.3
SSR4P51571 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC13.2□□□□□ -0.3
SSR4P51571 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC13.2□□□□□ -0.3
SSR4P51571 RPS9P1-201ENST00000419943 583 ntBASIC13.2□□□□□ -0.3
SSR4P51571 AL592076.1-201ENST00000424448 303 ntBASIC13.2□□□□□ -0.3
SSR4P51571 BX276092.5-201ENST00000439926 886 ntTSL 5 BASIC13.2□□□□□ -0.3
SSR4P51571 TAC3-208ENST00000441881 731 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
SSR4P51571 AP000358.1-201ENST00000456260 156 ntBASIC13.2□□□□□ -0.3
SSR4P51571 LRRC75A-AS1-209ENST00000481027 1016 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
SSR4P51571 AC037486.1-201ENST00000523792 790 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
SSR4P51571 SIRT3-210ENST00000529382 1225 ntTSL 2 BASIC13.2□□□□□ -0.3
SSR4P51571 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC13.2□□□□□ -0.3
SSR4P51571 PPFIBP1-204ENST00000535047 875 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
SSR4P51571 LTBR-209ENST00000541102 1084 ntTSL 5 BASIC13.2□□□□□ -0.3
SSR4P51571 FOS-206ENST00000555347 1280 ntTSL 2 BASIC13.2□□□□□ -0.3
SSR4P51571 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC13.2□□□□□ -0.3
SSR4P51571 AC093330.1-206ENST00000582546 812 ntTSL 3 BASIC13.2□□□□□ -0.3
SSR4P51571 LRRC75A-AS1-226ENST00000582911 879 ntTSL 5 BASIC13.2□□□□□ -0.3
SSR4P51571 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC13.2□□□□□ -0.3
SSR4P51571 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC13.2□□□□□ -0.3
SSR4P51571 CUTA-215ENST00000611509 1199 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
SSR4P51571 LINC00923-205ENST00000615399 932 ntTSL 5 BASIC13.2□□□□□ -0.3
SSR4P51571 TAC3-211ENST00000615887 1120 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
SSR4P51571 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC13.2□□□□□ -0.3
SSR4P51571 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
SSR4P51571 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
SSR4P51571 C16orf45-209ENST00000566490 1854 ntTSL 5 BASIC13.2□□□□□ -0.3
SSR4P51571 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SSR4P51571 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SSR4P51571 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SSR4P51571 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms