Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SLC6A12P48065 SDF2-201ENST00000247020 1568 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SLC6A12P48065 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SLC6A12P48065 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SLC6A12P48065 AC008429.1-202ENST00000518818 2067 ntTSL 2 BASIC13.87□□□□□ -0.19
SLC6A12P48065 AKR1C2-202ENST00000421196 1481 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
SLC6A12P48065 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
SLC6A12P48065 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
SLC6A12P48065 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SLC6A12P48065 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC13.87□□□□□ -0.19
SLC6A12P48065 AC004997.1-205ENST00000447976 1851 ntTSL 2 BASIC13.87□□□□□ -0.19
SLC6A12P48065 FAM90A12P-201ENST00000519497 2375 ntBASIC13.87□□□□□ -0.19
SLC6A12P48065 FAM90A24P-201ENST00000520792 2369 ntBASIC13.87□□□□□ -0.19
SLC6A12P48065 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
SLC6A12P48065 GOLGA8IP-202ENST00000611635 2100 ntBASIC13.87□□□□□ -0.19
SLC6A12P48065 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC13.87□□□□□ -0.19
SLC6A12P48065 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC13.87□□□□□ -0.19
SLC6A12P48065 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC13.87□□□□□ -0.19
SLC6A12P48065 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC13.87□□□□□ -0.19
SLC6A12P48065 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SLC6A12P48065 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
SLC6A12P48065 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC13.87□□□□□ -0.19
SLC6A12P48065 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC13.87□□□□□ -0.19
SLC6A12P48065 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SLC6A12P48065 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
SLC6A12P48065 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
SLC6A12P48065 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SLC6A12P48065 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
SLC6A12P48065 HMGA1P1-201ENST00000415560 1062 ntBASIC13.87□□□□□ -0.19
SLC6A12P48065 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC13.87□□□□□ -0.19
SLC6A12P48065 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
SLC6A12P48065 SLC5A4-AS1-201ENST00000434942 876 ntTSL 3 BASIC13.87□□□□□ -0.19
SLC6A12P48065 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC13.87□□□□□ -0.19
SLC6A12P48065 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC13.87□□□□□ -0.19
SLC6A12P48065 AC104073.2-201ENST00000453737 312 ntBASIC13.87□□□□□ -0.19
SLC6A12P48065 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC13.87□□□□□ -0.19
SLC6A12P48065 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC13.87□□□□□ -0.19
SLC6A12P48065 AC009779.1-201ENST00000551138 283 ntBASIC13.87□□□□□ -0.19
SLC6A12P48065 MAX-218ENST00000557746 571 ntTSL 4 BASIC13.87□□□□□ -0.19
SLC6A12P48065 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
SLC6A12P48065 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC13.87□□□□□ -0.19
SLC6A12P48065 DERL2-202ENST00000570848 657 ntTSL 5 BASIC13.87□□□□□ -0.19
SLC6A12P48065 KRT18P8-201ENST00000581937 1246 ntBASIC13.87□□□□□ -0.19
SLC6A12P48065 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC13.87□□□□□ -0.19
SLC6A12P48065 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC13.87□□□□□ -0.19
SLC6A12P48065 AL359881.2-201ENST00000602973 570 ntBASIC13.87□□□□□ -0.19
SLC6A12P48065 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC13.87□□□□□ -0.19
SLC6A12P48065 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC13.87□□□□□ -0.19
SLC6A12P48065 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC13.87□□□□□ -0.19
SLC6A12P48065 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SLC6A12P48065 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
SLC6A12P48065 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC13.87□□□□□ -0.19
SLC6A12P48065 C14orf39-201ENST00000321731 2813 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SLC6A12P48065 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
SLC6A12P48065 ZNF75A-205ENST00000574298 2347 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
SLC6A12P48065 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC13.87□□□□□ -0.19
SLC6A12P48065 YIPF3-213ENST00000506469 1444 ntTSL 5 BASIC13.87□□□□□ -0.19
SLC6A12P48065 GIT2-201ENST00000320063 2094 ntTSL 5 BASIC13.87□□□□□ -0.19
SLC6A12P48065 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC13.87□□□□□ -0.19
SLC6A12P48065 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SLC6A12P48065 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
SLC6A12P48065 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
SLC6A12P48065 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
SLC6A12P48065 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SLC6A12P48065 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SLC6A12P48065 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC13.87□□□□□ -0.19
SLC6A12P48065 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
SLC6A12P48065 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC13.87□□□□□ -0.19
SLC6A12P48065 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SLC6A12P48065 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SLC6A12P48065 NAP1L2-201ENST00000373517 2550 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
SLC6A12P48065 AP003555.1-202ENST00000511013 1755 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SLC6A12P48065 NUTM2G-201ENST00000354649 2851 ntAPPRIS P3 TSL 5 BASIC13.86□□□□□ -0.19
SLC6A12P48065 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
SLC6A12P48065 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
SLC6A12P48065 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SLC6A12P48065 TUNAR-201ENST00000503525 3197 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SLC6A12P48065 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SLC6A12P48065 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SLC6A12P48065 AC126755.1-201ENST00000525846 6405 ntBASIC13.86□□□□□ -0.19
SLC6A12P48065 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SLC6A12P48065 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SLC6A12P48065 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC13.86□□□□□ -0.19
SLC6A12P48065 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC13.86□□□□□ -0.19
SLC6A12P48065 CSH2-202ENST00000345366 598 ntTSL 5 BASIC13.86□□□□□ -0.19
SLC6A12P48065 APOC3-202ENST00000375345 604 ntTSL 5 BASIC13.86□□□□□ -0.19
SLC6A12P48065 NPPA-201ENST00000376476 728 ntTSL 3 BASIC13.86□□□□□ -0.19
SLC6A12P48065 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC13.86□□□□□ -0.19
SLC6A12P48065 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
SLC6A12P48065 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC13.86□□□□□ -0.19
SLC6A12P48065 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SLC6A12P48065 KRTAP10-13P-201ENST00000412914 571 ntBASIC13.86□□□□□ -0.19
SLC6A12P48065 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC13.86□□□□□ -0.19
SLC6A12P48065 AL592301.1-201ENST00000439501 864 ntTSL 3 BASIC13.86□□□□□ -0.19
SLC6A12P48065 SGO1-AS1-201ENST00000441442 499 ntTSL 4 BASIC13.86□□□□□ -0.19
SLC6A12P48065 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC13.86□□□□□ -0.19
SLC6A12P48065 SERPINA13P-202ENST00000478994 924 ntBASIC13.86□□□□□ -0.19
SLC6A12P48065 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC13.86□□□□□ -0.19
SLC6A12P48065 CSH2-206ENST00000560142 749 ntTSL 5 BASIC13.86□□□□□ -0.19
SLC6A12P48065 EID1-202ENST00000560490 584 ntTSL 3 BASIC13.86□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 61 ms