Protein–RNA interactions for Protein: P33241

LSP1, Lymphocyte-specific protein 1, humanhuman

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSP1P33241 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
LSP1P33241 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
LSP1P33241 GHITM-201ENST00000372134 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
LSP1P33241 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC14.52□□□□□ -0.09
LSP1P33241 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC14.52□□□□□ -0.09
LSP1P33241 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
LSP1P33241 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
LSP1P33241 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC14.52□□□□□ -0.09
LSP1P33241 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC14.52□□□□□ -0.09
LSP1P33241 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
LSP1P33241 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC14.52□□□□□ -0.09
LSP1P33241 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
LSP1P33241 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC14.52□□□□□ -0.09
LSP1P33241 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC14.52□□□□□ -0.09
LSP1P33241 MCPH1-AS1-201ENST00000515608 2147 ntTSL 5 BASIC14.52□□□□□ -0.09
LSP1P33241 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
LSP1P33241 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC14.52□□□□□ -0.09
LSP1P33241 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
LSP1P33241 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC14.52□□□□□ -0.09
LSP1P33241 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC14.52□□□□□ -0.09
LSP1P33241 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC14.52□□□□□ -0.09
LSP1P33241 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC14.52□□□□□ -0.09
LSP1P33241 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC14.52□□□□□ -0.09
LSP1P33241 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC14.52□□□□□ -0.09
LSP1P33241 AC009955.4-201ENST00000597192 544 ntBASIC14.52□□□□□ -0.09
LSP1P33241 AC105339.1-204ENST00000636249 355 ntBASIC14.52□□□□□ -0.09
LSP1P33241 CYTH1-203ENST00000585509 3315 ntTSL 5 BASIC14.52□□□□□ -0.09
LSP1P33241 AC002350.2-201ENST00000623894 1828 ntBASIC14.52□□□□□ -0.09
LSP1P33241 AC004147.4-201ENST00000636421 1844 ntTSL 5 BASIC14.52□□□□□ -0.09
LSP1P33241 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC14.52□□□□□ -0.09
LSP1P33241 TCF3-201ENST00000262965 4451 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
LSP1P33241 AFF3-202ENST00000409236 9849 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
LSP1P33241 CPN2-201ENST00000323830 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
LSP1P33241 FAM118A-201ENST00000216214 3458 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
LSP1P33241 RPS15A-213ENST00000576436 2190 ntTSL 4 BASIC14.51□□□□□ -0.09
LSP1P33241 AC134407.3-201ENST00000624035 2139 ntBASIC14.51□□□□□ -0.09
LSP1P33241 RBM15-202ENST00000487146 3316 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
LSP1P33241 ARMCX2-202ENST00000330154 2663 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LSP1P33241 TRAIP-201ENST00000331456 2028 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LSP1P33241 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC14.51□□□□□ -0.09
LSP1P33241 MBP-205ENST00000397860 4844 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
LSP1P33241 RTL5-202ENST00000609883 4105 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
LSP1P33241 NPTN-201ENST00000345330 2444 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
LSP1P33241 DSN1-204ENST00000426836 2441 ntAPPRIS P3 TSL 2 BASIC14.51□□□□□ -0.09
LSP1P33241 CEMIP-201ENST00000220244 7226 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LSP1P33241 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
LSP1P33241 POTEB3-201ENST00000611217 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LSP1P33241 DCAF12L1-201ENST00000371126 3382 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LSP1P33241 KIF3A-208ENST00000618515 3333 ntTSL 5 BASIC14.51□□□□□ -0.09
LSP1P33241 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
LSP1P33241 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LSP1P33241 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
LSP1P33241 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
LSP1P33241 KRT18P13-201ENST00000400056 1290 ntBASIC14.51□□□□□ -0.09
LSP1P33241 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC14.51□□□□□ -0.09
LSP1P33241 MCCD1P2-201ENST00000423228 335 ntBASIC14.51□□□□□ -0.09
LSP1P33241 COX10-202ENST00000429152 875 ntTSL 2 BASIC14.51□□□□□ -0.09
LSP1P33241 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC14.51□□□□□ -0.09
LSP1P33241 GCOM2-201ENST00000509133 1104 ntBASIC14.51□□□□□ -0.09
LSP1P33241 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC14.51□□□□□ -0.09
LSP1P33241 PGAM5P1-201ENST00000518923 814 ntBASIC14.51□□□□□ -0.09
LSP1P33241 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC14.51□□□□□ -0.09
LSP1P33241 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC14.51□□□□□ -0.09
LSP1P33241 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
LSP1P33241 COX5A-206ENST00000568783 571 ntTSL 3 BASIC14.51□□□□□ -0.09
LSP1P33241 JPT2-214ENST00000569765 782 ntTSL 2 BASIC14.51□□□□□ -0.09
LSP1P33241 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
LSP1P33241 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC14.51□□□□□ -0.09
LSP1P33241 KCNMA1-232ENST00000638306 3811 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
LSP1P33241 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
LSP1P33241 RIC1-203ENST00000414202 6774 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
LSP1P33241 TMEM248-201ENST00000341567 4229 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LSP1P33241 C9orf170-201ENST00000623052 3239 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
LSP1P33241 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
LSP1P33241 OR2A25-202ENST00000641441 1733 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
LSP1P33241 GLIS3-202ENST00000381971 3961 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
LSP1P33241 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
LSP1P33241 CSNK1G1-205ENST00000607537 2083 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
LSP1P33241 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LSP1P33241 OS9-203ENST00000389142 2457 ntTSL 5 BASIC14.51□□□□□ -0.09
LSP1P33241 EFHC2-202ENST00000420999 2464 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LSP1P33241 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC14.51□□□□□ -0.09
LSP1P33241 BAHD1-203ENST00000561234 4698 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LSP1P33241 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC14.51□□□□□ -0.09
LSP1P33241 PID1-204ENST00000409462 2387 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
LSP1P33241 PRPF4-201ENST00000374198 2787 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
LSP1P33241 MAN2C1-242ENST00000569482 3177 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
LSP1P33241 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
LSP1P33241 NR1H3-217ENST00000467728 2731 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LSP1P33241 ATXN2L-205ENST00000395547 3981 ntAPPRIS P4 TSL 1 (best) BASIC14.5□□□□□ -0.09
LSP1P33241 NOTCH1-201ENST00000277541 9371 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LSP1P33241 GOLGA8IP-201ENST00000340249 1899 ntTSL 2 BASIC14.5□□□□□ -0.09
LSP1P33241 SLC6A9-205ENST00000372310 3130 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
LSP1P33241 SERPINH1-205ENST00000525876 2283 ntTSL 2 BASIC14.5□□□□□ -0.09
LSP1P33241 DNMT3B-205ENST00000443239 2674 ntTSL 2 BASIC14.5□□□□□ -0.09
LSP1P33241 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LSP1P33241 MYLK-201ENST00000346322 5892 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
LSP1P33241 SLC9A3P3-201ENST00000457608 2229 ntBASIC14.5□□□□□ -0.09
LSP1P33241 IMMT-204ENST00000410111 3001 ntAPPRIS P4 TSL 1 (best) BASIC14.5□□□□□ -0.09
LSP1P33241 MKX-201ENST00000375790 3846 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms