Protein–RNA interactions for Protein: P18846

ATF1, Cyclic AMP-dependent transcription factor ATF-1, humanhuman

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1P18846 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
ATF1P18846 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
ATF1P18846 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
ATF1P18846 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC12.73□□□□□ -0.37
ATF1P18846 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC12.73□□□□□ -0.37
ATF1P18846 AC245100.3-201ENST00000441281 285 ntBASIC12.73□□□□□ -0.37
ATF1P18846 AC092183.1-201ENST00000469884 875 ntBASIC12.73□□□□□ -0.37
ATF1P18846 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
ATF1P18846 API5-211ENST00000534695 560 ntTSL 5 BASIC12.73□□□□□ -0.37
ATF1P18846 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC12.73□□□□□ -0.37
ATF1P18846 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC12.73□□□□□ -0.37
ATF1P18846 PAM16-204ENST00000571941 674 ntTSL 3 BASIC12.73□□□□□ -0.37
ATF1P18846 CTBP2P3-201ENST00000585629 1255 ntBASIC12.73□□□□□ -0.37
ATF1P18846 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC12.73□□□□□ -0.37
ATF1P18846 ARAF-201ENST00000290277 2504 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
ATF1P18846 TUBGCP6-201ENST00000248846 5612 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
ATF1P18846 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
ATF1P18846 B4GALT3-202ENST00000367998 1871 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
ATF1P18846 AC139712.1-201ENST00000378256 1875 ntBASIC12.73□□□□□ -0.37
ATF1P18846 LDB3-207ENST00000542786 1889 ntTSL 2 BASIC12.73□□□□□ -0.37
ATF1P18846 TRIM69-206ENST00000559390 2486 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
ATF1P18846 PROKR1-201ENST00000303786 4273 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
ATF1P18846 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
ATF1P18846 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC12.73□□□□□ -0.37
ATF1P18846 NLGN3-201ENST00000358741 3046 ntAPPRIS P4 TSL 5 BASIC12.73□□□□□ -0.37
ATF1P18846 BRSK1-206ENST00000590333 2977 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
ATF1P18846 PHF2-203ENST00000610682 2921 ntTSL 5 BASIC12.73□□□□□ -0.37
ATF1P18846 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
ATF1P18846 MAP7D2-201ENST00000379643 3918 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
ATF1P18846 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
ATF1P18846 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
ATF1P18846 AL139385.1-201ENST00000611744 3272 ntBASIC12.73□□□□□ -0.37
ATF1P18846 ATP6V0A4-202ENST00000353492 2709 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
ATF1P18846 ALOX15B-202ENST00000380183 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
ATF1P18846 HMGCL-203ENST00000374490 1600 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
ATF1P18846 NLRX1-201ENST00000292199 3744 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
ATF1P18846 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
ATF1P18846 RNF14-201ENST00000347642 4213 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
ATF1P18846 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
ATF1P18846 RCAN3-207ENST00000538532 2640 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
ATF1P18846 UNC5CL-201ENST00000244565 3136 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
ATF1P18846 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC12.73□□□□□ -0.37
ATF1P18846 TRAF3IP3-204ENST00000367026 2058 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
ATF1P18846 GRIK4-208ENST00000638419 3593 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
ATF1P18846 CNN2-202ENST00000348419 2033 ntTSL 2 BASIC12.72□□□□□ -0.37
ATF1P18846 ARHGEF33-202ENST00000409978 4484 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
ATF1P18846 PSMC1-201ENST00000261303 4448 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
ATF1P18846 ZNF395-201ENST00000344423 4808 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
ATF1P18846 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
ATF1P18846 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC12.72□□□□□ -0.37
ATF1P18846 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC12.72□□□□□ -0.37
ATF1P18846 BHLHE40-AS1-204ENST00000620618 2355 ntTSL 2 BASIC12.72□□□□□ -0.37
ATF1P18846 ZNF821-214ENST00000565601 1858 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
ATF1P18846 ELN-222ENST00000458204 3147 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
ATF1P18846 CLUHP2-201ENST00000426660 1303 ntBASIC12.72□□□□□ -0.37
ATF1P18846 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC12.72□□□□□ -0.37
ATF1P18846 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
ATF1P18846 POFUT1-202ENST00000375749 5235 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
ATF1P18846 CFAP74-209ENST00000493964 5247 ntAPPRIS P5 TSL 5 BASIC12.72□□□□□ -0.37
ATF1P18846 GSDMA-201ENST00000301659 2164 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
ATF1P18846 ADAMTS13-202ENST00000356589 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
ATF1P18846 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
ATF1P18846 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
ATF1P18846 ZNF570-201ENST00000330173 5559 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
ATF1P18846 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
ATF1P18846 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
ATF1P18846 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC12.72□□□□□ -0.37
ATF1P18846 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
ATF1P18846 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
ATF1P18846 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC12.72□□□□□ -0.37
ATF1P18846 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC12.72□□□□□ -0.37
ATF1P18846 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC12.72□□□□□ -0.37
ATF1P18846 AC008494.3-201ENST00000606615 944 ntBASIC12.72□□□□□ -0.37
ATF1P18846 AC138696.2-201ENST00000607376 223 ntBASIC12.72□□□□□ -0.37
ATF1P18846 GPALPP1-207ENST00000611650 899 ntBASIC12.72□□□□□ -0.37
ATF1P18846 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
ATF1P18846 WFDC1-204ENST00000613603 549 ntBASIC12.72□□□□□ -0.37
ATF1P18846 CALB1-201ENST00000265431 2533 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
ATF1P18846 RPS6KC1-206ENST00000543354 4082 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
ATF1P18846 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
ATF1P18846 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC12.72□□□□□ -0.37
ATF1P18846 AC118758.2-201ENST00000614242 2813 ntBASIC12.72□□□□□ -0.37
ATF1P18846 PTPN23-201ENST00000265562 5244 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
ATF1P18846 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC12.72□□□□□ -0.37
ATF1P18846 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
ATF1P18846 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
ATF1P18846 FAM122B-201ENST00000298090 2706 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
ATF1P18846 GMCL1-201ENST00000282570 4191 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
ATF1P18846 FURIN-206ENST00000610579 4191 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
ATF1P18846 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC12.72□□□□□ -0.37
ATF1P18846 CCT6B-201ENST00000314144 1838 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
ATF1P18846 FAM189A1-201ENST00000261275 4705 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
ATF1P18846 LIMK1-208ENST00000538333 2170 ntTSL 2 BASIC12.71□□□□□ -0.37
ATF1P18846 CRISPLD2-209ENST00000567845 2178 ntAPPRIS ALT1 TSL 5 BASIC12.71□□□□□ -0.37
ATF1P18846 PLIN3-207ENST00000592528 2154 ntTSL 2 BASIC12.71□□□□□ -0.37
ATF1P18846 KLHL32-206ENST00000544166 2864 ntTSL 2 BASIC12.71□□□□□ -0.37
ATF1P18846 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
ATF1P18846 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
ATF1P18846 TMEM173-201ENST00000330794 1771 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
ATF1P18846 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms