Protein–RNA interactions for Protein: P13765

HLA-DOB, HLA class II histocompatibility antigen, DO beta chain, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOBP13765 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
HLA-DOBP13765 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
HLA-DOBP13765 KRT8P24-201ENST00000560290 1559 ntBASIC12.97□□□□□ -0.33
HLA-DOBP13765 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
HLA-DOBP13765 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
HLA-DOBP13765 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
HLA-DOBP13765 SIPA1L3-201ENST00000222345 7987 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
HLA-DOBP13765 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
HLA-DOBP13765 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
HLA-DOBP13765 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
HLA-DOBP13765 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
HLA-DOBP13765 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC12.97□□□□□ -0.33
HLA-DOBP13765 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC12.97□□□□□ -0.33
HLA-DOBP13765 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
HLA-DOBP13765 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
HLA-DOBP13765 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
HLA-DOBP13765 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC12.96□□□□□ -0.33
HLA-DOBP13765 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
HLA-DOBP13765 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC12.96□□□□□ -0.33
HLA-DOBP13765 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
HLA-DOBP13765 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
HLA-DOBP13765 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
HLA-DOBP13765 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
HLA-DOBP13765 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
HLA-DOBP13765 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
HLA-DOBP13765 MYOM3-202ENST00000374434 5804 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
HLA-DOBP13765 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
HLA-DOBP13765 MYLK-203ENST00000359169 7585 ntAPPRIS P3 TSL 5 BASIC12.96□□□□□ -0.33
HLA-DOBP13765 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
HLA-DOBP13765 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC12.96□□□□□ -0.33
HLA-DOBP13765 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
HLA-DOBP13765 TUBB8P4-201ENST00000511806 1324 ntBASIC12.96□□□□□ -0.33
HLA-DOBP13765 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
HLA-DOBP13765 CFAP46-202ENST00000368586 8278 ntAPPRIS P2 TSL 5 BASIC12.96□□□□□ -0.33
HLA-DOBP13765 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
HLA-DOBP13765 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
HLA-DOBP13765 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
HLA-DOBP13765 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC12.96□□□□□ -0.33
HLA-DOBP13765 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC12.96□□□□□ -0.33
HLA-DOBP13765 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
HLA-DOBP13765 VGLL3-202ENST00000398399 10400 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
HLA-DOBP13765 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
HLA-DOBP13765 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
HLA-DOBP13765 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC12.96□□□□□ -0.33
HLA-DOBP13765 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC12.96□□□□□ -0.33
HLA-DOBP13765 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
HLA-DOBP13765 MTX1P1-201ENST00000440904 838 ntBASIC12.96□□□□□ -0.33
HLA-DOBP13765 HSPB1P2-201ENST00000448722 546 ntBASIC12.96□□□□□ -0.33
HLA-DOBP13765 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC12.96□□□□□ -0.33
HLA-DOBP13765 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
HLA-DOBP13765 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC12.96□□□□□ -0.33
HLA-DOBP13765 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
HLA-DOBP13765 RNA5SP412-201ENST00000516234 123 ntBASIC12.96□□□□□ -0.33
HLA-DOBP13765 RN7SL560P-201ENST00000577943 264 ntBASIC12.96□□□□□ -0.33
HLA-DOBP13765 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
HLA-DOBP13765 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC12.96□□□□□ -0.33
HLA-DOBP13765 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC12.96□□□□□ -0.33
HLA-DOBP13765 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
HLA-DOBP13765 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
HLA-DOBP13765 REXO1L6P-201ENST00000603433 1515 ntBASIC12.96□□□□□ -0.33
HLA-DOBP13765 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC12.96□□□□□ -0.33
HLA-DOBP13765 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
HLA-DOBP13765 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
HLA-DOBP13765 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
HLA-DOBP13765 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
HLA-DOBP13765 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
HLA-DOBP13765 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC12.96□□□□□ -0.34
HLA-DOBP13765 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.34
HLA-DOBP13765 SMARCA2-204ENST00000357248 5855 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
HLA-DOBP13765 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC12.96□□□□□ -0.34
HLA-DOBP13765 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
HLA-DOBP13765 IRAK3-201ENST00000261233 8663 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
HLA-DOBP13765 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC12.96□□□□□ -0.34
HLA-DOBP13765 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.34
HLA-DOBP13765 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
HLA-DOBP13765 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
HLA-DOBP13765 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC12.96□□□□□ -0.34
HLA-DOBP13765 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC12.95□□□□□ -0.34
HLA-DOBP13765 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
HLA-DOBP13765 SSTR5-AS1-204ENST00000569832 2864 ntTSL 2 BASIC12.95□□□□□ -0.34
HLA-DOBP13765 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC12.95□□□□□ -0.34
HLA-DOBP13765 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
HLA-DOBP13765 MYLK-208ENST00000475616 5745 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
HLA-DOBP13765 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC12.95□□□□□ -0.34
HLA-DOBP13765 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
HLA-DOBP13765 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
HLA-DOBP13765 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
HLA-DOBP13765 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
HLA-DOBP13765 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
HLA-DOBP13765 NRP2-201ENST00000272849 5909 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
HLA-DOBP13765 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
HLA-DOBP13765 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
HLA-DOBP13765 GK-202ENST00000378941 458 ntTSL 3 BASIC12.95□□□□□ -0.34
HLA-DOBP13765 WBP2-203ENST00000433525 928 ntTSL 2 BASIC12.95□□□□□ -0.34
HLA-DOBP13765 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC12.95□□□□□ -0.34
HLA-DOBP13765 Z93015.1-201ENST00000451718 390 ntBASIC12.95□□□□□ -0.34
HLA-DOBP13765 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC12.95□□□□□ -0.34
HLA-DOBP13765 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
HLA-DOBP13765 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
HLA-DOBP13765 AL096828.3-201ENST00000615354 462 ntBASIC12.95□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms