Protein–RNA interactions for Protein: P0DN86

CGB3, Choriogonadotropin subunit beta 3, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CGB3P0DN86 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
CGB3P0DN86 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
CGB3P0DN86 ACVR1C-204ENST00000409680 1786 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
CGB3P0DN86 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
CGB3P0DN86 HYOU1-219ENST00000614711 3057 ntTSL 5 BASIC11.81□□□□□ -0.52
CGB3P0DN86 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
CGB3P0DN86 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC11.81□□□□□ -0.52
CGB3P0DN86 GOLGA8EP-201ENST00000530246 1959 ntBASIC11.81□□□□□ -0.52
CGB3P0DN86 CPNE2-204ENST00000565874 1976 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
CGB3P0DN86 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
CGB3P0DN86 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC11.81□□□□□ -0.52
CGB3P0DN86 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
CGB3P0DN86 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
CGB3P0DN86 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
CGB3P0DN86 PCGF2-203ENST00000616129 1534 ntTSL 5 BASIC11.81□□□□□ -0.52
CGB3P0DN86 INTS14-201ENST00000313182 2393 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
CGB3P0DN86 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
CGB3P0DN86 LDB3-207ENST00000542786 1889 ntTSL 2 BASIC11.8□□□□□ -0.52
CGB3P0DN86 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
CGB3P0DN86 AC089987.1-201ENST00000551654 2209 ntBASIC11.8□□□□□ -0.52
CGB3P0DN86 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
CGB3P0DN86 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
CGB3P0DN86 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
CGB3P0DN86 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CGB3P0DN86 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
CGB3P0DN86 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
CGB3P0DN86 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
CGB3P0DN86 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
CGB3P0DN86 TNIK-204ENST00000436636 6970 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
CGB3P0DN86 SDF2-201ENST00000247020 1568 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CGB3P0DN86 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CGB3P0DN86 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC11.8□□□□□ -0.52
CGB3P0DN86 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
CGB3P0DN86 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CGB3P0DN86 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CGB3P0DN86 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
CGB3P0DN86 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CGB3P0DN86 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
CGB3P0DN86 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
CGB3P0DN86 LINC01815-202ENST00000641468 1409 ntBASIC11.8□□□□□ -0.52
CGB3P0DN86 AL928654.5-201ENST00000624831 2501 ntBASIC11.8□□□□□ -0.52
CGB3P0DN86 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
CGB3P0DN86 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CGB3P0DN86 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC11.8□□□□□ -0.52
CGB3P0DN86 RPS3-201ENST00000278572 907 ntTSL 3 BASIC11.8□□□□□ -0.52
CGB3P0DN86 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC11.8□□□□□ -0.52
CGB3P0DN86 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
CGB3P0DN86 FOLR1-202ENST00000393676 996 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CGB3P0DN86 SF3B1-204ENST00000414963 651 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
CGB3P0DN86 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC11.8□□□□□ -0.52
CGB3P0DN86 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC11.8□□□□□ -0.52
CGB3P0DN86 RPS2P32-201ENST00000439199 892 ntBASIC11.8□□□□□ -0.52
CGB3P0DN86 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC11.8□□□□□ -0.52
CGB3P0DN86 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC11.8□□□□□ -0.52
CGB3P0DN86 SERPINA13P-202ENST00000478994 924 ntBASIC11.8□□□□□ -0.52
CGB3P0DN86 AC126915.1-201ENST00000522847 1038 ntBASIC11.8□□□□□ -0.52
CGB3P0DN86 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC11.8□□□□□ -0.52
CGB3P0DN86 EID1-202ENST00000560490 584 ntTSL 3 BASIC11.8□□□□□ -0.52
CGB3P0DN86 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC11.8□□□□□ -0.52
CGB3P0DN86 KRT18P8-201ENST00000581937 1246 ntBASIC11.8□□□□□ -0.52
CGB3P0DN86 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC11.8□□□□□ -0.52
CGB3P0DN86 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC11.8□□□□□ -0.52
CGB3P0DN86 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CGB3P0DN86 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
CGB3P0DN86 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC11.8□□□□□ -0.52
CGB3P0DN86 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC11.8□□□□□ -0.52
CGB3P0DN86 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CGB3P0DN86 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC11.8□□□□□ -0.52
CGB3P0DN86 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
CGB3P0DN86 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CGB3P0DN86 FAM96A-203ENST00000557835 1536 ntTSL 2 BASIC11.8□□□□□ -0.52
CGB3P0DN86 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CGB3P0DN86 SELENOV-202ENST00000423711 1701 ntTSL 5 BASIC11.8□□□□□ -0.52
CGB3P0DN86 HELLS-202ENST00000348459 3099 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CGB3P0DN86 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC11.8□□□□□ -0.52
CGB3P0DN86 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
CGB3P0DN86 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
CGB3P0DN86 SLC46A3-201ENST00000266943 3173 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
CGB3P0DN86 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC11.79□□□□□ -0.52
CGB3P0DN86 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC11.79□□□□□ -0.52
CGB3P0DN86 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
CGB3P0DN86 AC072061.1-201ENST00000569710 2234 ntBASIC11.79□□□□□ -0.52
CGB3P0DN86 RARS2-201ENST00000369536 1818 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
CGB3P0DN86 MPZ-204ENST00000491222 1824 ntTSL 2 BASIC11.79□□□□□ -0.52
CGB3P0DN86 YIPF3-213ENST00000506469 1444 ntTSL 5 BASIC11.79□□□□□ -0.52
CGB3P0DN86 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC11.79□□□□□ -0.52
CGB3P0DN86 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
CGB3P0DN86 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC11.79□□□□□ -0.52
CGB3P0DN86 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
CGB3P0DN86 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
CGB3P0DN86 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC11.79□□□□□ -0.52
CGB3P0DN86 AC004997.1-205ENST00000447976 1851 ntTSL 2 BASIC11.79□□□□□ -0.52
CGB3P0DN86 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC11.79□□□□□ -0.52
CGB3P0DN86 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC11.79□□□□□ -0.52
CGB3P0DN86 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
CGB3P0DN86 RPL13AP3-202ENST00000494676 1473 ntBASIC11.79□□□□□ -0.52
CGB3P0DN86 SSBP1-201ENST00000265304 687 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
CGB3P0DN86 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC11.79□□□□□ -0.52
CGB3P0DN86 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
CGB3P0DN86 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC11.79□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 55.5 ms