Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
RAB40ALP0C0E4 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC13.63□□□□□ -0.23
RAB40ALP0C0E4 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC13.63□□□□□ -0.23
RAB40ALP0C0E4 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC13.63□□□□□ -0.23
RAB40ALP0C0E4 CICP14-201ENST00000629111 2732 ntBASIC13.63□□□□□ -0.23
RAB40ALP0C0E4 OSER1-201ENST00000255174 1572 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RAB40ALP0C0E4 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RAB40ALP0C0E4 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
RAB40ALP0C0E4 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC13.62□□□□□ -0.23
RAB40ALP0C0E4 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
RAB40ALP0C0E4 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RAB40ALP0C0E4 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC13.62□□□□□ -0.23
RAB40ALP0C0E4 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
RAB40ALP0C0E4 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
RAB40ALP0C0E4 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
RAB40ALP0C0E4 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RAB40ALP0C0E4 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RAB40ALP0C0E4 CAP2P1-201ENST00000557743 1390 ntBASIC13.62□□□□□ -0.23
RAB40ALP0C0E4 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
RAB40ALP0C0E4 AC015688.4-201ENST00000580780 1647 ntBASIC13.62□□□□□ -0.23
RAB40ALP0C0E4 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RAB40ALP0C0E4 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC13.62□□□□□ -0.23
RAB40ALP0C0E4 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC13.62□□□□□ -0.23
RAB40ALP0C0E4 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC13.62□□□□□ -0.23
RAB40ALP0C0E4 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RAB40ALP0C0E4 CRYBB1-201ENST00000215939 1102 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RAB40ALP0C0E4 TMSB10-201ENST00000233143 496 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RAB40ALP0C0E4 IGHV3-48-201ENST00000390624 432 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
RAB40ALP0C0E4 TMEM219-202ENST00000414689 1024 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RAB40ALP0C0E4 AC060234.1-201ENST00000422966 474 ntTSL 3 BASIC13.62□□□□□ -0.23
RAB40ALP0C0E4 AC254562.2-201ENST00000428786 667 ntTSL 3 BASIC13.62□□□□□ -0.23
RAB40ALP0C0E4 AC114488.1-201ENST00000435872 591 ntTSL 3 BASIC13.62□□□□□ -0.23
RAB40ALP0C0E4 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC13.62□□□□□ -0.23
RAB40ALP0C0E4 RPS6KA2-AS1-201ENST00000455390 627 ntTSL 5 BASIC13.62□□□□□ -0.23
RAB40ALP0C0E4 MYLK-AS1-202ENST00000470449 760 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
RAB40ALP0C0E4 AC114947.1-202ENST00000514136 344 ntBASIC13.62□□□□□ -0.23
RAB40ALP0C0E4 NDUFC1-209ENST00000539002 1198 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
RAB40ALP0C0E4 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC13.62□□□□□ -0.23
RAB40ALP0C0E4 AL031713.1-201ENST00000564813 661 ntBASIC13.62□□□□□ -0.23
RAB40ALP0C0E4 TMEM219-204ENST00000566848 1292 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RAB40ALP0C0E4 MIR3147-201ENST00000577811 66 ntBASIC13.62□□□□□ -0.23
RAB40ALP0C0E4 FAM104A-206ENST00000583024 417 ntTSL 3 BASIC13.62□□□□□ -0.23
RAB40ALP0C0E4 AC073352.2-201ENST00000609385 439 ntBASIC13.62□□□□□ -0.23
RAB40ALP0C0E4 AL591471.1-201ENST00000621855 229 ntBASIC13.62□□□□□ -0.23
RAB40ALP0C0E4 KRTAP10-4-203ENST00000622352 1244 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
RAB40ALP0C0E4 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RAB40ALP0C0E4 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
RAB40ALP0C0E4 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
RAB40ALP0C0E4 CPA5-201ENST00000393213 1444 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RAB40ALP0C0E4 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC13.62□□□□□ -0.23
RAB40ALP0C0E4 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
RAB40ALP0C0E4 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RAB40ALP0C0E4 AC138969.2-201ENST00000532739 9932 ntBASIC13.62□□□□□ -0.23
RAB40ALP0C0E4 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RAB40ALP0C0E4 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC13.62□□□□□ -0.23
RAB40ALP0C0E4 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC13.62□□□□□ -0.23
RAB40ALP0C0E4 AC245100.1-201ENST00000452996 1331 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
RAB40ALP0C0E4 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RAB40ALP0C0E4 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC13.62□□□□□ -0.23
RAB40ALP0C0E4 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
RAB40ALP0C0E4 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RAB40ALP0C0E4 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC13.61□□□□□ -0.23
RAB40ALP0C0E4 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RAB40ALP0C0E4 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RAB40ALP0C0E4 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RAB40ALP0C0E4 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
RAB40ALP0C0E4 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RAB40ALP0C0E4 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
RAB40ALP0C0E4 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
RAB40ALP0C0E4 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RAB40ALP0C0E4 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC13.61□□□□□ -0.23
RAB40ALP0C0E4 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RAB40ALP0C0E4 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RAB40ALP0C0E4 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RAB40ALP0C0E4 IGF1-201ENST00000307046 1097 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
RAB40ALP0C0E4 PRIMA1-201ENST00000316227 1080 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
RAB40ALP0C0E4 CST9L-201ENST00000376979 959 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RAB40ALP0C0E4 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
RAB40ALP0C0E4 AL583805.1-201ENST00000391389 531 ntBASIC13.61□□□□□ -0.23
RAB40ALP0C0E4 RPS9-204ENST00000391753 709 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RAB40ALP0C0E4 IGF1-203ENST00000392904 761 ntTSL 5 BASIC13.61□□□□□ -0.23
RAB40ALP0C0E4 NACA-202ENST00000393891 1059 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RAB40ALP0C0E4 IL1R2-203ENST00000441002 1106 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
RAB40ALP0C0E4 LINC00322-201ENST00000450205 699 ntTSL 3 BASIC13.61□□□□□ -0.23
RAB40ALP0C0E4 DUX4L50-201ENST00000455245 715 ntBASIC13.61□□□□□ -0.23
RAB40ALP0C0E4 SMIM23-202ENST00000523047 573 ntAPPRIS P5 TSL 2 BASIC13.61□□□□□ -0.23
RAB40ALP0C0E4 TMEM218-205ENST00000527271 706 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
RAB40ALP0C0E4 HS3ST3A1-202ENST00000578576 750 ntTSL 3 BASIC13.61□□□□□ -0.23
RAB40ALP0C0E4 FBXL12-202ENST00000585379 956 ntTSL 2 BASIC13.61□□□□□ -0.23
RAB40ALP0C0E4 MIR7845-201ENST00000618396 99 ntBASIC13.61□□□□□ -0.23
RAB40ALP0C0E4 AL805961.1-201ENST00000642026 753 ntBASIC13.61□□□□□ -0.23
RAB40ALP0C0E4 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RAB40ALP0C0E4 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC13.61□□□□□ -0.23
RAB40ALP0C0E4 KRT8P31-201ENST00000504812 1408 ntBASIC13.61□□□□□ -0.23
RAB40ALP0C0E4 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
RAB40ALP0C0E4 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
RAB40ALP0C0E4 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC13.61□□□□□ -0.23
RAB40ALP0C0E4 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RAB40ALP0C0E4 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC13.61□□□□□ -0.23
RAB40ALP0C0E4 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 67.5 ms