Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 PDXDC2P-206ENST00000534700 1315 ntBASIC15.1■□□□□ 0.01
RB1P06400 PSTPIP1-207ENST00000559295 1349 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
RB1P06400 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
RB1P06400 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RB1P06400 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RB1P06400 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC15.1■□□□□ 0.01
RB1P06400 PSMG2-201ENST00000317615 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RB1P06400 PLSCR1-214ENST00000487389 1443 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
RB1P06400 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
RB1P06400 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC15.09■□□□□ 0.01
RB1P06400 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC15.09■□□□□ 0.01
RB1P06400 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC15.09■□□□□ 0.01
RB1P06400 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC15.09■□□□□ 0.01
RB1P06400 FDFT1-214ENST00000528812 2013 ntTSL 2 BASIC15.09■□□□□ 0.01
RB1P06400 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RB1P06400 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
RB1P06400 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC15.09■□□□□ 0.01
RB1P06400 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
RB1P06400 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RB1P06400 ZNF226-201ENST00000300823 817 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
RB1P06400 HNRNPA1-201ENST00000330752 1294 ntTSL 5 BASIC15.09■□□□□ 0.01
RB1P06400 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RB1P06400 TMEM95-202ENST00000389982 1191 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
RB1P06400 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC15.09■□□□□ 0.01
RB1P06400 EIF4E2-205ENST00000409394 604 ntTSL 3 BASIC15.09■□□□□ 0.01
RB1P06400 RAD51C-203ENST00000421782 567 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
RB1P06400 RPL3P5-201ENST00000441645 1232 ntBASIC15.09■□□□□ 0.01
RB1P06400 TMEM14B-208ENST00000467317 1224 ntTSL 2 BASIC15.09■□□□□ 0.01
RB1P06400 MRPS36-204ENST00000512880 1200 ntTSL 5 BASIC15.09■□□□□ 0.01
RB1P06400 AC100858.1-201ENST00000514059 1228 ntBASIC15.09■□□□□ 0.01
RB1P06400 PAX5-210ENST00000520281 969 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
RB1P06400 KRT18P37-201ENST00000520711 1282 ntBASIC15.09■□□□□ 0.01
RB1P06400 BID-209ENST00000551952 700 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RB1P06400 AC012174.1-201ENST00000562349 714 ntTSL 3 BASIC15.09■□□□□ 0.01
RB1P06400 NAV1-210ENST00000593583 726 ntBASIC15.09■□□□□ 0.01
RB1P06400 SELENOW-212ENST00000601048 888 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RB1P06400 MRPS36-205ENST00000602380 1200 ntTSL 2 BASIC15.09■□□□□ 0.01
RB1P06400 AL135936.1-201ENST00000617956 998 ntTSL 5 BASIC15.09■□□□□ 0.01
RB1P06400 MME-218ENST00000625667 363 ntTSL 5 BASIC15.09■□□□□ 0.01
RB1P06400 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
RB1P06400 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RB1P06400 AC064801.2-201ENST00000625052 1303 ntBASIC15.09■□□□□ 0.01
RB1P06400 GOT2-202ENST00000434819 1615 ntTSL 2 BASIC15.09■□□□□ 0.01
RB1P06400 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC15.09■□□□□ 0.01
RB1P06400 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
RB1P06400 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RB1P06400 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC15.09■□□□□ 0.01
RB1P06400 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RB1P06400 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
RB1P06400 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC15.08■□□□□ 0.01
RB1P06400 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0.01
RB1P06400 FAM168A-202ENST00000356467 1767 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
RB1P06400 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0.01
RB1P06400 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC15.08■□□□□ 0.01
RB1P06400 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
RB1P06400 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
RB1P06400 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC15.08■□□□□ 0.01
RB1P06400 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 0.01
RB1P06400 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
RB1P06400 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC15.08■□□□□ 0.01
RB1P06400 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC15.08■□□□□ 0.01
RB1P06400 CNBP-205ENST00000500450 1516 ntTSL 2 BASIC15.08■□□□□ 0.01
RB1P06400 FAM96A-203ENST00000557835 1536 ntTSL 2 BASIC15.08■□□□□ 0.01
RB1P06400 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
RB1P06400 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC15.08■□□□□ 0
RB1P06400 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
RB1P06400 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
RB1P06400 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
RB1P06400 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
RB1P06400 MC3R-201ENST00000243911 1084 ntAPPRIS P1 BASIC15.08■□□□□ 0
RB1P06400 CDKN2C-202ENST00000371761 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
RB1P06400 PLA2G12B-201ENST00000373032 1128 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
RB1P06400 TRAPPC3-201ENST00000373159 590 ntTSL 3 BASIC15.08■□□□□ 0
RB1P06400 ZNF286A-201ENST00000395893 654 ntTSL 3 BASIC15.08■□□□□ 0
RB1P06400 ANG-202ENST00000397990 742 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
RB1P06400 SNX3-204ENST00000426155 1072 ntTSL 1 (best) BASIC15.08■□□□□ 0
RB1P06400 EMP1-203ENST00000431267 1039 ntTSL 1 (best) BASIC15.08■□□□□ 0
RB1P06400 FRMD4A-204ENST00000475141 1233 ntTSL 1 (best) BASIC15.08■□□□□ 0
RB1P06400 C3orf38-204ENST00000486971 1259 ntTSL 2 BASIC15.08■□□□□ 0
RB1P06400 C21orf62-204ENST00000490358 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
RB1P06400 EEF1GP8-201ENST00000506566 1154 ntBASIC15.08■□□□□ 0
RB1P06400 CASP3-205ENST00000517513 964 ntTSL 5 BASIC15.08■□□□□ 0
RB1P06400 EHF-208ENST00000530286 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
RB1P06400 AL132994.1-201ENST00000554098 400 ntBASIC15.08■□□□□ 0
RB1P06400 AC023825.2-201ENST00000562970 672 ntTSL 2 BASIC15.08■□□□□ 0
RB1P06400 APOC1-209ENST00000592885 562 ntTSL 3 BASIC15.08■□□□□ 0
RB1P06400 AC006547.3-201ENST00000600090 583 ntTSL 3 BASIC15.08■□□□□ 0
RB1P06400 ANKRD36C-208ENST00000619511 737 ntTSL 1 (best) BASIC15.08■□□□□ 0
RB1P06400 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC15.08■□□□□ 0
RB1P06400 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
RB1P06400 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
RB1P06400 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC15.08■□□□□ 0
RB1P06400 MYADML-201ENST00000474610 2147 ntBASIC15.08■□□□□ 0
RB1P06400 SHANK2-202ENST00000357171 1373 ntTSL 5 BASIC15.08■□□□□ 0
RB1P06400 ANXA5-202ENST00000501272 1363 ntTSL 5 BASIC15.08■□□□□ 0
RB1P06400 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
RB1P06400 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
RB1P06400 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
RB1P06400 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
RB1P06400 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 55 ms