Protein–RNA interactions for Protein: P03979

TRGV3, T cell receptor gamma variable 3 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV3P03979 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC11.43□□□□□ -0.58
TRGV3P03979 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
TRGV3P03979 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
TRGV3P03979 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC11.43□□□□□ -0.58
TRGV3P03979 PKP1-203ENST00000367324 5384 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
TRGV3P03979 CCSER2-203ENST00000372088 7657 ntTSL 2 BASIC11.43□□□□□ -0.58
TRGV3P03979 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC11.43□□□□□ -0.58
TRGV3P03979 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
TRGV3P03979 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
TRGV3P03979 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
TRGV3P03979 RTN4-202ENST00000337526 4790 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
TRGV3P03979 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC11.43□□□□□ -0.58
TRGV3P03979 AMT-239ENST00000636865 1914 ntTSL 5 BASIC11.43□□□□□ -0.58
TRGV3P03979 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC11.43□□□□□ -0.58
TRGV3P03979 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
TRGV3P03979 PEAR1-202ENST00000338302 4970 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
TRGV3P03979 NPHP3-ACAD11-201ENST00000471702 7784 ntTSL 2 BASIC11.43□□□□□ -0.58
TRGV3P03979 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC11.43□□□□□ -0.58
TRGV3P03979 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC11.43□□□□□ -0.58
TRGV3P03979 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
TRGV3P03979 SIPA1L3-201ENST00000222345 7987 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
TRGV3P03979 ISY1-RAB43-201ENST00000418265 4868 ntAPPRIS P1 TSL 2 BASIC11.42□□□□□ -0.58
TRGV3P03979 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC11.42□□□□□ -0.58
TRGV3P03979 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
TRGV3P03979 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC11.42□□□□□ -0.58
TRGV3P03979 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC11.42□□□□□ -0.58
TRGV3P03979 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
TRGV3P03979 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC11.42□□□□□ -0.58
TRGV3P03979 OR2C3-204ENST00000641802 8509 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
TRGV3P03979 SPAST-201ENST00000315285 5117 ntAPPRIS P4 TSL 1 (best) BASIC11.42□□□□□ -0.58
TRGV3P03979 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
TRGV3P03979 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC11.42□□□□□ -0.58
TRGV3P03979 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
TRGV3P03979 RPS3-201ENST00000278572 907 ntTSL 3 BASIC11.42□□□□□ -0.58
TRGV3P03979 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
TRGV3P03979 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
TRGV3P03979 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC11.42□□□□□ -0.58
TRGV3P03979 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC11.42□□□□□ -0.58
TRGV3P03979 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
TRGV3P03979 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC11.42□□□□□ -0.58
TRGV3P03979 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
TRGV3P03979 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC11.42□□□□□ -0.58
TRGV3P03979 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC11.42□□□□□ -0.58
TRGV3P03979 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC11.42□□□□□ -0.58
TRGV3P03979 SORD2P-201ENST00000558556 1069 ntBASIC11.42□□□□□ -0.58
TRGV3P03979 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC11.42□□□□□ -0.58
TRGV3P03979 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
TRGV3P03979 NAT9-222ENST00000583476 583 ntTSL 3 BASIC11.42□□□□□ -0.58
TRGV3P03979 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC11.42□□□□□ -0.58
TRGV3P03979 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC11.42□□□□□ -0.58
TRGV3P03979 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC11.42□□□□□ -0.58
TRGV3P03979 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
TRGV3P03979 HES2-201ENST00000377834 4262 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
TRGV3P03979 EML5-207ENST00000554922 9570 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
TRGV3P03979 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
TRGV3P03979 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC11.42□□□□□ -0.58
TRGV3P03979 NCOR2-201ENST00000356219 7226 ntTSL 5 BASIC11.42□□□□□ -0.58
TRGV3P03979 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC11.42□□□□□ -0.58
TRGV3P03979 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
TRGV3P03979 SEC14L5-201ENST00000251170 6459 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
TRGV3P03979 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
TRGV3P03979 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
TRGV3P03979 ZCCHC8-207ENST00000543897 5663 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
TRGV3P03979 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC11.42□□□□□ -0.58
TRGV3P03979 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC11.42□□□□□ -0.58
TRGV3P03979 MAPK4-206ENST00000592595 4330 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
TRGV3P03979 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC11.42□□□□□ -0.58
TRGV3P03979 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC11.42□□□□□ -0.58
TRGV3P03979 CACNA1I-202ENST00000402142 10004 ntAPPRIS P4 TSL 1 (best) BASIC11.42□□□□□ -0.58
TRGV3P03979 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
TRGV3P03979 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC11.42□□□□□ -0.58
TRGV3P03979 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC11.42□□□□□ -0.58
TRGV3P03979 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC11.42□□□□□ -0.58
TRGV3P03979 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
TRGV3P03979 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
TRGV3P03979 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
TRGV3P03979 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC11.42□□□□□ -0.58
TRGV3P03979 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC11.42□□□□□ -0.58
TRGV3P03979 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
TRGV3P03979 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
TRGV3P03979 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
TRGV3P03979 DGKD-201ENST00000264057 6297 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
TRGV3P03979 KRT8P29-201ENST00000420409 1371 ntBASIC11.41□□□□□ -0.58
TRGV3P03979 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC11.41□□□□□ -0.58
TRGV3P03979 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
TRGV3P03979 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
TRGV3P03979 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
TRGV3P03979 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
TRGV3P03979 SYNPO-205ENST00000522122 5098 ntAPPRIS ALT2 TSL 2 BASIC11.41□□□□□ -0.58
TRGV3P03979 RAP2B-201ENST00000323534 8351 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
TRGV3P03979 MAP3K4-203ENST00000366920 5445 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
TRGV3P03979 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
TRGV3P03979 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC11.41□□□□□ -0.58
TRGV3P03979 AL008718.2-201ENST00000609206 1313 ntBASIC11.41□□□□□ -0.58
TRGV3P03979 REXO1L6P-201ENST00000603433 1515 ntBASIC11.41□□□□□ -0.58
TRGV3P03979 ARHGEF37-201ENST00000333677 4968 ntAPPRIS P1 TSL 2 BASIC11.41□□□□□ -0.58
TRGV3P03979 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
TRGV3P03979 FASN-201ENST00000306749 8565 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
TRGV3P03979 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
TRGV3P03979 SCARB2-215ENST00000639145 4471 ntAPPRIS ALT1 TSL 5 BASIC11.41□□□□□ -0.58
Retrieved 100 of 98,524 protein–RNA pairs in 54.1 ms