Protein–RNA interactions for Protein: P02656

APOC3, Apolipoprotein C-III, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC3P02656 DUSP11-202ENST00000443070 2175 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
APOC3P02656 CA14-201ENST00000369111 2403 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
APOC3P02656 CTAGE13P-201ENST00000416709 2446 ntBASIC11.53□□□□□ -0.56
APOC3P02656 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
APOC3P02656 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC11.53□□□□□ -0.56
APOC3P02656 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
APOC3P02656 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC11.53□□□□□ -0.56
APOC3P02656 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC11.53□□□□□ -0.56
APOC3P02656 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC11.53□□□□□ -0.56
APOC3P02656 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC11.53□□□□□ -0.56
APOC3P02656 RBSN-204ENST00000449050 903 ntTSL 2 BASIC11.53□□□□□ -0.56
APOC3P02656 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC11.53□□□□□ -0.56
APOC3P02656 ARTN-206ENST00000472435 402 ntTSL 3 BASIC11.53□□□□□ -0.56
APOC3P02656 AC079140.1-201ENST00000508039 487 ntBASIC11.53□□□□□ -0.56
APOC3P02656 PRYP6-201ENST00000514804 343 ntBASIC11.53□□□□□ -0.56
APOC3P02656 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC11.53□□□□□ -0.56
APOC3P02656 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
APOC3P02656 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC11.53□□□□□ -0.56
APOC3P02656 CMC2-214ENST00000565925 640 ntTSL 5 BASIC11.53□□□□□ -0.56
APOC3P02656 AC233702.5-201ENST00000584107 538 ntBASIC11.53□□□□□ -0.56
APOC3P02656 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
APOC3P02656 AC092902.2-210ENST00000468859 1996 ntTSL 2 BASIC11.53□□□□□ -0.56
APOC3P02656 CTCFL-217ENST00000608425 2915 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
APOC3P02656 NOL4L-203ENST00000359676 5991 ntTSL 2 BASIC11.53□□□□□ -0.56
APOC3P02656 PAX3-205ENST00000392069 3170 ntTSL 5 BASIC11.53□□□□□ -0.56
APOC3P02656 APPBP2-201ENST00000083182 6478 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
APOC3P02656 EFHC2-202ENST00000420999 2464 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
APOC3P02656 AC009108.4-201ENST00000623284 2451 ntBASIC11.53□□□□□ -0.56
APOC3P02656 MED24-201ENST00000356271 3446 ntTSL 2 BASIC11.53□□□□□ -0.56
APOC3P02656 ZNF573-204ENST00000392138 2266 ntTSL 2 BASIC11.53□□□□□ -0.56
APOC3P02656 LINC00511-213ENST00000581549 2265 ntTSL 2 BASIC11.53□□□□□ -0.56
APOC3P02656 RBM33-203ENST00000341148 7058 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
APOC3P02656 PID1-203ENST00000392055 2533 ntAPPRIS P1 TSL 2 BASIC11.53□□□□□ -0.56
APOC3P02656 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
APOC3P02656 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
APOC3P02656 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
APOC3P02656 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
APOC3P02656 ELN-201ENST00000252034 3781 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
APOC3P02656 CNOT7-211ENST00000523917 1885 ntTSL 2 BASIC11.53□□□□□ -0.56
APOC3P02656 CORO7-202ENST00000537233 3392 ntTSL 2 BASIC11.53□□□□□ -0.56
APOC3P02656 AC137834.1-201ENST00000548184 2107 ntAPPRIS P1 TSL 2 BASIC11.53□□□□□ -0.56
APOC3P02656 FAM177A1-201ENST00000280987 2927 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
APOC3P02656 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.56
APOC3P02656 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
APOC3P02656 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
APOC3P02656 LMX1A-202ENST00000342310 3545 ntAPPRIS P1 TSL 2 BASIC11.52□□□□□ -0.56
APOC3P02656 PRKCQ-201ENST00000263125 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
APOC3P02656 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC11.52□□□□□ -0.56
APOC3P02656 LINC00477-201ENST00000483544 1710 ntTSL 2 BASIC11.52□□□□□ -0.56
APOC3P02656 CATSPERE-203ENST00000366534 3333 ntAPPRIS ALT2 TSL 2 BASIC11.52□□□□□ -0.56
APOC3P02656 TGOLN2-204ENST00000409015 2276 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
APOC3P02656 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
APOC3P02656 RASAL1-201ENST00000261729 3382 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.56
APOC3P02656 CSNK1G1-209ENST00000634811 2592 ntAPPRIS ALT1 TSL 5 BASIC11.52□□□□□ -0.56
APOC3P02656 DGKH-202ENST00000337343 4246 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
APOC3P02656 ZNF493-208ENST00000599461 1769 ntBASIC11.52□□□□□ -0.57
APOC3P02656 SIGLEC1-201ENST00000344754 6720 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
APOC3P02656 PRIMA1-202ENST00000393140 3711 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
APOC3P02656 KIAA1958-202ENST00000374244 2643 ntAPPRIS ALT1 TSL 5 BASIC11.52□□□□□ -0.57
APOC3P02656 CACNA2D3-AS1-201ENST00000471265 2078 ntTSL 2 BASIC11.52□□□□□ -0.57
APOC3P02656 NR1H3-201ENST00000395397 1501 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
APOC3P02656 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
APOC3P02656 CACNB3-204ENST00000547230 2395 ntTSL 3 BASIC11.52□□□□□ -0.57
APOC3P02656 CAPN13-201ENST00000295055 2683 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
APOC3P02656 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
APOC3P02656 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
APOC3P02656 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
APOC3P02656 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
APOC3P02656 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC11.52□□□□□ -0.57
APOC3P02656 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
APOC3P02656 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
APOC3P02656 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC11.52□□□□□ -0.57
APOC3P02656 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC11.52□□□□□ -0.57
APOC3P02656 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC11.52□□□□□ -0.57
APOC3P02656 NFATC2IP-206ENST00000568148 1157 ntTSL 2 BASIC11.52□□□□□ -0.57
APOC3P02656 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
APOC3P02656 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC11.52□□□□□ -0.57
APOC3P02656 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC11.52□□□□□ -0.57
APOC3P02656 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC11.52□□□□□ -0.57
APOC3P02656 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC11.52□□□□□ -0.57
APOC3P02656 AC004706.3-202ENST00000621574 984 ntBASIC11.52□□□□□ -0.57
APOC3P02656 TMEM191A-211ENST00000637163 1067 ntBASIC11.52□□□□□ -0.57
APOC3P02656 FBLN2-201ENST00000295760 4127 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
APOC3P02656 DSCR3-201ENST00000309117 3256 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
APOC3P02656 TFDP2-215ENST00000489671 9857 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
APOC3P02656 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC11.52□□□□□ -0.57
APOC3P02656 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
APOC3P02656 BIVM-201ENST00000257336 3859 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
APOC3P02656 PRPF6-201ENST00000266079 3044 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
APOC3P02656 DRG2-202ENST00000395726 1897 ntTSL 5 BASIC11.52□□□□□ -0.57
APOC3P02656 AC004997.1-205ENST00000447976 1851 ntTSL 2 BASIC11.52□□□□□ -0.57
APOC3P02656 C12orf56-201ENST00000333722 3936 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
APOC3P02656 CHST15-202ENST00000435907 4820 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
APOC3P02656 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
APOC3P02656 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
APOC3P02656 AC006037.2-201ENST00000622975 2232 ntBASIC11.52□□□□□ -0.57
APOC3P02656 PNMA5-201ENST00000361887 3197 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
APOC3P02656 MYO7A-201ENST00000409619 7106 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
APOC3P02656 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
APOC3P02656 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Retrieved 100 of 98,524 protein–RNA pairs in 63.6 ms