Protein–RNA interactions for Protein: P02654

APOC1, Apolipoprotein C-I, humanhuman

Predictions only

Length 83 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1P02654 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC12.88□□□□□ -0.35
APOC1P02654 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC12.88□□□□□ -0.35
APOC1P02654 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
APOC1P02654 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC12.88□□□□□ -0.35
APOC1P02654 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC12.88□□□□□ -0.35
APOC1P02654 EPRS-201ENST00000366923 5014 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
APOC1P02654 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
APOC1P02654 KHSRPP1-201ENST00000427983 1768 ntBASIC12.88□□□□□ -0.35
APOC1P02654 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
APOC1P02654 GNG12-AS1-201ENST00000413628 2058 ntTSL 2 BASIC12.88□□□□□ -0.35
APOC1P02654 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC12.88□□□□□ -0.35
APOC1P02654 DCST2-202ENST00000368424 2392 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
APOC1P02654 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
APOC1P02654 DNM1P41-201ENST00000623634 3350 ntBASIC12.88□□□□□ -0.35
APOC1P02654 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
APOC1P02654 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
APOC1P02654 STAG3-206ENST00000426455 4450 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
APOC1P02654 MON1B-201ENST00000248248 6091 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
APOC1P02654 WDFY2-203ENST00000612477 6932 ntTSL 2 BASIC12.88□□□□□ -0.35
APOC1P02654 EHD1-202ENST00000359393 3618 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
APOC1P02654 TRIM10-204ENST00000449742 3546 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
APOC1P02654 CHMP7-202ENST00000397677 3403 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
APOC1P02654 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
APOC1P02654 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC12.88□□□□□ -0.35
APOC1P02654 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
APOC1P02654 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
APOC1P02654 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
APOC1P02654 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
APOC1P02654 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
APOC1P02654 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC12.88□□□□□ -0.35
APOC1P02654 TCF3-201ENST00000262965 4451 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
APOC1P02654 GOPC-202ENST00000368498 4450 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
APOC1P02654 CILP2-201ENST00000291495 4199 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
APOC1P02654 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
APOC1P02654 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
APOC1P02654 NR3C2-209ENST00000625323 5909 ntTSL 5 BASIC12.87□□□□□ -0.35
APOC1P02654 PRR12-201ENST00000418929 6955 ntAPPRIS P2 TSL 5 BASIC12.87□□□□□ -0.35
APOC1P02654 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC12.87□□□□□ -0.35
APOC1P02654 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
APOC1P02654 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC12.87□□□□□ -0.35
APOC1P02654 TMPO-202ENST00000266732 3615 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
APOC1P02654 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
APOC1P02654 CCT8L2-201ENST00000359963 2060 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
APOC1P02654 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
APOC1P02654 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
APOC1P02654 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
APOC1P02654 TLK1-202ENST00000360843 5726 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
APOC1P02654 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
APOC1P02654 ADAMTS10-201ENST00000270328 4194 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
APOC1P02654 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
APOC1P02654 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
APOC1P02654 UBFD1-207ENST00000567212 4727 ntAPPRIS ALT2 TSL 2 BASIC12.87□□□□□ -0.35
APOC1P02654 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
APOC1P02654 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
APOC1P02654 DNM1-212ENST00000627543 4734 ntAPPRIS ALT1 TSL 5 BASIC12.87□□□□□ -0.35
APOC1P02654 CACNA1G-214ENST00000505165 6633 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
APOC1P02654 ROBO1-213ENST00000618846 7483 ntTSL 5 BASIC12.87□□□□□ -0.35
APOC1P02654 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
APOC1P02654 AC020910.6-201ENST00000623084 1459 ntBASIC12.87□□□□□ -0.35
APOC1P02654 LDB3-209ENST00000623056 2314 ntTSL 5 BASIC12.87□□□□□ -0.35
APOC1P02654 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC12.87□□□□□ -0.35
APOC1P02654 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
APOC1P02654 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
APOC1P02654 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC12.87□□□□□ -0.35
APOC1P02654 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
APOC1P02654 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
APOC1P02654 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
APOC1P02654 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC12.87□□□□□ -0.35
APOC1P02654 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
APOC1P02654 TKFC-201ENST00000394900 4696 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
APOC1P02654 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC12.87□□□□□ -0.35
APOC1P02654 RN7SKP175-201ENST00000408472 289 ntBASIC12.87□□□□□ -0.35
APOC1P02654 WDR53-203ENST00000429115 683 ntTSL 2 BASIC12.87□□□□□ -0.35
APOC1P02654 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
APOC1P02654 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC12.87□□□□□ -0.35
APOC1P02654 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
APOC1P02654 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC12.87□□□□□ -0.35
APOC1P02654 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC12.87□□□□□ -0.35
APOC1P02654 SORD2P-201ENST00000558556 1069 ntBASIC12.87□□□□□ -0.35
APOC1P02654 RPL28-206ENST00000558752 671 ntTSL 3 BASIC12.87□□□□□ -0.35
APOC1P02654 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC12.87□□□□□ -0.35
APOC1P02654 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC12.87□□□□□ -0.35
APOC1P02654 AC025279.2-201ENST00000569730 653 ntBASIC12.87□□□□□ -0.35
APOC1P02654 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC12.87□□□□□ -0.35
APOC1P02654 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC12.87□□□□□ -0.35
APOC1P02654 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
APOC1P02654 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC12.87□□□□□ -0.35
APOC1P02654 AC008825.2-201ENST00000603374 718 ntBASIC12.87□□□□□ -0.35
APOC1P02654 AL355385.1-201ENST00000606123 409 ntBASIC12.87□□□□□ -0.35
APOC1P02654 AL022328.1-201ENST00000610050 478 ntBASIC12.87□□□□□ -0.35
APOC1P02654 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC12.87□□□□□ -0.35
APOC1P02654 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC12.87□□□□□ -0.35
APOC1P02654 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
APOC1P02654 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
APOC1P02654 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC12.87□□□□□ -0.35
APOC1P02654 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
APOC1P02654 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC12.87□□□□□ -0.35
APOC1P02654 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC12.87□□□□□ -0.35
APOC1P02654 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
APOC1P02654 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 118.4 ms