Protein–RNA interactions for Protein: O94822

LTN1, E3 ubiquitin-protein ligase listerin, humanhuman

Predictions only

Length 1,766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1O94822 AL513477.1-201ENST00000602865 2407 ntBASIC18.49■□□□□ 0.55
LTN1O94822 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
LTN1O94822 CST9-201ENST00000376971 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LTN1O94822 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC18.49■□□□□ 0.55
LTN1O94822 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LTN1O94822 AC103702.1-201ENST00000548801 2630 ntBASIC18.48■□□□□ 0.55
LTN1O94822 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC18.48■□□□□ 0.55
LTN1O94822 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
LTN1O94822 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LTN1O94822 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
LTN1O94822 GRIA3-208ENST00000620581 2991 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
LTN1O94822 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
LTN1O94822 C1orf87-202ENST00000450089 1307 ntTSL 5 BASIC18.48■□□□□ 0.55
LTN1O94822 ERP29-202ENST00000455836 1333 ntTSL 2 BASIC18.48■□□□□ 0.55
LTN1O94822 AL158207.2-201ENST00000414926 266 ntTSL 5 BASIC18.48■□□□□ 0.55
LTN1O94822 AL136084.1-201ENST00000449172 318 ntBASIC18.48■□□□□ 0.55
LTN1O94822 RPL29P2-202ENST00000498671 657 ntBASIC18.48■□□□□ 0.55
LTN1O94822 NPAS3-209ENST00000551008 1002 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
LTN1O94822 AC123912.6-201ENST00000612657 315 ntBASIC18.48■□□□□ 0.55
LTN1O94822 AC018695.6-201ENST00000614011 534 ntBASIC18.48■□□□□ 0.55
LTN1O94822 STAG3L1-204ENST00000619870 1192 ntTSL 2 BASIC18.48■□□□□ 0.55
LTN1O94822 AC020904.3-201ENST00000624199 442 ntBASIC18.48■□□□□ 0.55
LTN1O94822 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
LTN1O94822 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC18.48■□□□□ 0.55
LTN1O94822 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LTN1O94822 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
LTN1O94822 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LTN1O94822 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
LTN1O94822 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
LTN1O94822 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LTN1O94822 ECI2-202ENST00000380118 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LTN1O94822 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LTN1O94822 WIPI1-201ENST00000262139 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LTN1O94822 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LTN1O94822 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
LTN1O94822 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LTN1O94822 KRT8P42-201ENST00000405771 1399 ntBASIC18.48■□□□□ 0.55
LTN1O94822 MPV17-209ENST00000405983 859 ntTSL 5 BASIC18.47■□□□□ 0.55
LTN1O94822 FDPSP7-201ENST00000429043 1054 ntBASIC18.47■□□□□ 0.55
LTN1O94822 AC093700.1-201ENST00000503348 717 ntBASIC18.47■□□□□ 0.55
LTN1O94822 BID-209ENST00000551952 700 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LTN1O94822 AL590235.1-201ENST00000564650 861 ntBASIC18.47■□□□□ 0.55
LTN1O94822 AC103808.3-201ENST00000579714 598 ntTSL 5 BASIC18.47■□□□□ 0.55
LTN1O94822 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
LTN1O94822 Metazoa_SRP.63-201ENST00000617144 298 ntBASIC18.47■□□□□ 0.55
LTN1O94822 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LTN1O94822 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LTN1O94822 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LTN1O94822 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
LTN1O94822 CAPN14-202ENST00000403897 2197 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
LTN1O94822 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LTN1O94822 HTR3D-201ENST00000334128 1459 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
LTN1O94822 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LTN1O94822 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC18.47■□□□□ 0.55
LTN1O94822 RER1-203ENST00000378513 3000 ntTSL 3 BASIC18.47■□□□□ 0.55
LTN1O94822 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LTN1O94822 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC18.47■□□□□ 0.55
LTN1O94822 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC18.47■□□□□ 0.55
LTN1O94822 HMOX2-201ENST00000219700 1621 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
LTN1O94822 C10orf88-204ENST00000481909 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LTN1O94822 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
LTN1O94822 AP4M1-204ENST00000421755 1572 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LTN1O94822 HIGD2A-201ENST00000274787 668 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LTN1O94822 HNRNPA1P58-201ENST00000403629 610 ntBASIC18.47■□□□□ 0.55
LTN1O94822 LINC00339-202ENST00000416769 1077 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
LTN1O94822 BX248123.1-201ENST00000429070 606 ntTSL 3 BASIC18.47■□□□□ 0.55
LTN1O94822 AL022332.1-202ENST00000432495 426 ntTSL 3 BASIC18.47■□□□□ 0.55
LTN1O94822 SPRY4-AS1-203ENST00000443800 566 ntTSL 3 BASIC18.47■□□□□ 0.55
LTN1O94822 AC109479.3-201ENST00000520163 360 ntTSL 3 BASIC18.47■□□□□ 0.55
LTN1O94822 WNT5B-206ENST00000542408 508 ntTSL 3 BASIC18.47■□□□□ 0.55
LTN1O94822 GABARAPL1-213ENST00000544284 531 ntTSL 3 BASIC18.47■□□□□ 0.55
LTN1O94822 YWHAE-212ENST00000575977 540 ntTSL 2 BASIC18.47■□□□□ 0.55
LTN1O94822 LINC00969-253ENST00000625338 804 ntTSL 5 BASIC18.47■□□□□ 0.55
LTN1O94822 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
LTN1O94822 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC18.47■□□□□ 0.55
LTN1O94822 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
LTN1O94822 SGK3-208ENST00000521198 3306 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LTN1O94822 AAAS-202ENST00000394384 1703 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
LTN1O94822 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
LTN1O94822 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC18.46■□□□□ 0.55
LTN1O94822 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
LTN1O94822 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC18.46■□□□□ 0.55
LTN1O94822 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LTN1O94822 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LTN1O94822 FAHD2B-201ENST00000272610 1305 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LTN1O94822 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC18.46■□□□□ 0.55
LTN1O94822 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
LTN1O94822 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC18.46■□□□□ 0.55
LTN1O94822 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LTN1O94822 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
LTN1O94822 GOLGA8EP-201ENST00000530246 1959 ntBASIC18.46■□□□□ 0.55
LTN1O94822 NQO2-204ENST00000380454 851 ntTSL 2 BASIC18.46■□□□□ 0.55
LTN1O94822 CPSF4L-202ENST00000397671 1275 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
LTN1O94822 PPIL3-205ENST00000409449 756 ntTSL 5 BASIC18.46■□□□□ 0.55
LTN1O94822 HNRNPA1P21-201ENST00000424115 961 ntBASIC18.46■□□□□ 0.55
LTN1O94822 AC078814.4-201ENST00000546650 327 ntBASIC18.46■□□□□ 0.55
LTN1O94822 AC079414.2-201ENST00000567157 1104 ntBASIC18.46■□□□□ 0.55
LTN1O94822 AC139099.2-201ENST00000572343 641 ntTSL 3 BASIC18.46■□□□□ 0.55
LTN1O94822 AC090617.4-201ENST00000572404 422 ntTSL 3 BASIC18.46■□□□□ 0.55
LTN1O94822 PAX5-204ENST00000377852 1472 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms